Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1389 ATGGGAAACCAGAAGCAAAAGTGGACGTCAGAGGAGGAAGACGCACTTTTGGCGGGCGTCAATAAGCACGGTCCTGGAAAGTGGAAGAACATTCTCAAAGATCCTGATTTCGCTCCGTCTCTCACTCATCGCTCTAACATTGACCTCAAGGACAAATGGCGTAATTTGAGTGTCAGTACTGCTTCACAAGGCTCAAAAGAGAAGTCTAGGATTCCTAAAGCAAAAGCTATCGTTGCTGCTATTTCTAACAACCAAAGCTCTGCTCCTGCTAAGCTTATTGCAGCTGCTGATACTGCAGGGGATGATACACCAAACAACAGCACACAAGATGGGAAAAATGTCCCAAGGTATTATTCGATGATTTTTGAAGCCCTTTCAACTATAAAAGATTCTAATGGATGTGACATAGGTACAATTGTTAACTTTATTGAGCAAAGGCATGAGGTGCCACAAAACTTTAGAAGGCAATTGAGCTCAAAGTTGAGAAGGCTTGTTTCACAAGGGAAGCTTGAAAAGGTTCAGAATTGCTACAAGGTGAAGAAAGACAATTCGTTGGCAGTTAAAACTCCTACTCCCAAACAAAAAGATGTCAGGCAACGGATATCGCAACAGACTATGGGAGCGGTGATGCCATCAGGGGAGACGGTGGAAGATGCAGCAAAAGCGGCTGCCTACAAAGTTGCTGATGCAGAGAACAAATCCTTCTTAGCTGCTGAAGCTGTGAAGGAGGCAGAGAGAATTGCAAAGATGGCCGAAGATACAGATTCGATGCTACAGATTATAAAAGAGATGTATGAAAAATATATGGCTGGTTTGGCTCCAGAAGGTTCTCAATTTGATGCACGTCAGTATGACACAAAAATGAATGAGTTACTTTCAGCTGATGGACAGGATTTCTTCACCTCATACGATGAAGTTTACGATAGTTTTGATTCTATGGGCCTGCAAGAAAATCTTCTCAGAGGCATCTATGCCTATGGTTTTGAGAAGCCATCTGCAATTCAGCAAAGGGGAATTGTTCCTTTTTGCAAAGGGCTTGATGTGATCCAACAAGCCCAGTCTGGAACAGGGAAGACTGCAACTTTTTGCTCTGGCATTTTGCAGCAACTTGATTATGGTCTCGTGCAATGCCAGGCTTTGGTCCTGGCACCCACTAGGGAACTTGCCCAACAGATTGAGAAGGTTATGCGGGCCCTTGGTGATTATCTTGGTGTGAAAGTTCATGCTTGTGTTGGTGGGACAAGTGTACGGGAAGACCAGCGCATTCTTCAAGCTGGTGTTCATGTAGTTGTTGGTACGCCTGGTCGTGTGTTTGATATGTTACGTAGACAGTCACTTCGTCCTGACTACATTCGGATGTTTGTGTTGGATGAGGCTGATGAAATGCTTTCTCGTGGATTTAAGGATCAGATTTATGACATTTTCCAGCTGCTACCATCCAAGATTCAAGTTGGGGTCTTCTCTGCCACAATGCCTCCTGAAGCCCTTGAGATCACCAGGAAGTTCATGAACAAGCCTGTTAGAATTCTTGTAAAGCGTGATGAGCTCACCTTGGAAGGTATCAAGCAGTTCTATGTGAATGTTGACAAGGAAGATTGGAAGCTCGAGACCCTCTGTGATCTTTATGAGACTTTGGCCATCACCCAGAGTGTTATCTTTGTCAATACTCGACGTAAAGTTGATTGGCTCACTGATAAGATGCGAAGCCGTGACCACACTGTATCTGCTACCCATGGTGACATGGACCAGAACACCCGAGACATTATTATGCGTGAGTTCCGTTCAGGTTCTTCTAGGGTTCTGATTACCACTGATCTATTGGCCCGTGGTATTGATGTCCAGCAGGTTTCCCTCGTTATTAACTATGATCTGCCGACACAACCGGAGAATTACCTTCATCGTATAGGAAGAAGTGGACGTTTTGGAAGAAAAGGTGTTGCGATCAACTTTGTAACAACGGAGGACGAAAGAATGCTATTCGACATCCAGAAGTTCTACAATGTGGTAATTGAAGAGCTGCCAGCCAATGTTGCTGATCTCCTGTGA 2046 44.43 MGNQKQKWTSEEEDALLAGVNKHGPGKWKNILKDPDFAPSLTHRSNIDLKDKWRNLSVSTASQGSKEKSRIPKAKAIVAAISNNQSSAPAKLIAAADTAGDDTPNNSTQDGKNVPRYYSMIFEALSTIKDSNGCDIGTIVNFIEQRHEVPQNFRRQLSSKLRRLVSQGKLEKVQNCYKVKKDNSLAVKTPTPKQKDVRQRISQQTMGAVMPSGETVEDAAKAAAYKVADAENKSFLAAEAVKEAERIAKMAEDTDSMLQIIKEMYEKYMAGLAPEGSQFDARQYDTKMNELLSADGQDFFTSYDEVYDSFDSMGLQENLLRGIYAYGFEKPSAIQQRGIVPFCKGLDVIQQAQSGTGKTATFCSGILQQLDYGLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKVHACVGGTSVREDQRILQAGVHVVVGTPGRVFDMLRRQSLRPDYIRMFVLDEADEMLSRGFKDQIYDIFQLLPSKIQVGVFSATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEDWKLETLCDLYETLAITQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARGIDVQQVSLVINYDLPTQPENYLHRIGRSGRFGRKGVAINFVTTEDERMLFDIQKFYNVVIEELPANVADLL 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 28715675 28725027 + ClG42_07g0138900.10 Clacu07g1389 253987

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1389 681 SUPERFAMILY Homeodomain-like 2 59 IPR009057 -
Clacu07g1389 681 Pfam linker histone H1 and H5 family 115 174 IPR005818 GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro)
Clacu07g1389 681 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 305 667 - GO:0003723(PANTHER)|GO:0003724(PANTHER)
Clacu07g1389 681 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 520 681 IPR001650 -
Clacu07g1389 681 Pfam DEAD/DEAH box helicase 333 495 IPR011545 GO:0003676(InterPro)|GO:0005524(InterPro)
Clacu07g1389 681 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 339 509 IPR014001 -
Clacu07g1389 681 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 455 463 IPR000629 -
Clacu07g1389 681 SMART h15plus2 111 176 IPR005818 GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro)
Clacu07g1389 681 Gene3D - 8 86 - -
Clacu07g1389 681 ProSiteProfiles Myb-like domain profile. 1 57 IPR001005 -
Clacu07g1389 681 Pfam Myb-like DNA-binding domain 5 56 IPR001005 -
Clacu07g1389 681 SMART ultradead3 327 524 IPR014001 -
Clacu07g1389 681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 377 662 IPR027417 -
Clacu07g1389 681 Gene3D - 517 681 IPR027417 -
Clacu07g1389 681 FunFam Telomere repeat-binding factor 1 8 87 - -
Clacu07g1389 681 CDD DEADc_EIF4A 313 510 - -
Clacu07g1389 681 SMART helicmild6 561 642 IPR001650 -
Clacu07g1389 681 ProSiteProfiles Linker histone H1/H5 globular (H15) domain profile. 113 181 IPR005818 GO:0000786(InterPro)|GO:0003677(InterPro)|GO:0006334(InterPro)
Clacu07g1389 681 FunFam Telomere repeat-binding factor 1 2 58 - -
Clacu07g1389 681 FunFam Eukaryotic initiation factor 4A-III 516 681 - -
Clacu07g1389 681 CDD SANT_TRF 6 56 - -
Clacu07g1389 681 Pfam Helicase conserved C-terminal domain 534 642 IPR001650 -
Clacu07g1389 681 SUPERFAMILY Winged helix DNA-binding domain 110 192 IPR036390 -
Clacu07g1389 681 Gene3D - 110 197 IPR036388 -
Clacu07g1389 681 Gene3D - 298 516 IPR027417 -
Clacu07g1389 681 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 308 336 IPR014014 GO:0003724(InterPro)
Clacu07g1389 681 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 61 IPR017930 -
Clacu07g1389 681 CDD SF2_C_DEAD 521 651 - -
Clacu07g1389 681 FunFam Eukaryotic initiation factor 4A-II 296 515 - -
Clacu07g1389 681 SMART sant 4 59 IPR001005 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1389 K03257 - - csv:101223055 817.379
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1832 Clacu-Chr1:30466358 Clacu07g1389 Clacu-Chr7:28715675 8.90E-15 dispersed
Clacu07g1389 Clacu-Chr7:28715675 Clacu10g1188 Clacu-Chr10:24625045 1.00E-140 dispersed
Clacu01g2558 Clacu-Chr1:35836165 Clacu07g1389 Clacu-Chr7:28715675 1.60E-24 transposed
Clacu05g0192 Clacu-Chr5:1732550 Clacu07g1389 Clacu-Chr7:28715675 1.70E-72 transposed
Clacu05g1369 Clacu-Chr5:14923209 Clacu07g1389 Clacu-Chr7:28715675 2.70E-56 transposed
Clacu05g2699 Clacu-Chr5:34573706 Clacu07g1389 Clacu-Chr7:28715675 3.40E-12 transposed
Clacu06g1837 Clacu-Chr6:28918003 Clacu07g1389 Clacu-Chr7:28715675 1.60E-44 transposed
Clacu07g0211 Clacu-Chr7:2467682 Clacu07g1389 Clacu-Chr7:28715675 2.80E-45 transposed
Clacu07g1368 Clacu-Chr7:28494704 Clacu07g1389 Clacu-Chr7:28715675 1.10E-50 transposed
Clacu08g1486 Clacu-Chr8:24838638 Clacu07g1389 Clacu-Chr7:28715675 4.70E-63 transposed
Clacu09g0310 Clacu-Chr9:2685579 Clacu07g1389 Clacu-Chr7:28715675 8.40E-49 transposed
Clacu10g1392 Clacu-Chr10:27048114 Clacu07g1389 Clacu-Chr7:28715675 2.40E-48 transposed
Clacu11g2086 Clacu-Chr11:31666719 Clacu07g1389 Clacu-Chr7:28715675 4.00E-49 transposed
Clacu07g1389 Clacu-Chr7:28715675 Clacu09g0083 Clacu-Chr9:765115 8.50E-233 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi9g136 . Blo06g00741 . Bda10g00864 Bpe06g00785 . . . Cmo08g00750 . Cma01g00052 Cma14g01252 Car01g00041 Car14g01103 Sed08g2596 . . Bhi01g02739 Tan04g2778 Cmetu04g3060 Lac12g2459 Hepe02g1516 . . Cla07g01320 Cam07g1175 Cec07g1507 Cco07g1466 Clacu07g1389 Cmu07g1367 Cre07g1748 . . . . . . Chy04g00666 . . . . . . . . . . Cmo01g00057 Cmo14g01286 . . . . Cpe02g01732 . . . . . . . . . . . . . . . Lsi07g00592 Csa03g04064 . Cme04g01226
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 6.6e-242 833.2
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 6.6e-242 833.2
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 1.2e-201 699.1
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 2.3e-200 694.9
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 78.8 8.9e-200 693.0
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07930 79.6 8.3e-190 659.8
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 6.6e-242 833.2
Clacu07g1655 . 84 802 Eukaryotic Initiation Factors Gene Family AT3G02270 56.3 1.5e-181 633.3
Clacu02g0187 . 30 127 Eukaryotic Initiation Factors Gene Family AT4G27130 91.8 1.1e-47 186.0
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT4G27130 80.5 5.3e-47 183.7
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT4G27130 79.6 2.6e-46 181.4
Clacu02g0187 . 30 127 Eukaryotic Initiation Factors Gene Family AT5G54760 90.8 1.8e-47 185.3
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT5G54760 80.5 5.3e-47 183.7
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT5G54760 79.6 2.6e-46 181.4
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT5G54940 86.6 4.9e-53 203.8
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT5G54940 85.7 4.2e-52 200.7
Clacu02g0187 . 28 127 Eukaryotic Initiation Factors Gene Family AT5G54940 73.0 5.0e-37 150.6
Clacu02g0187 . 29 127 Eukaryotic Initiation Factors Gene Family AT1G54290 90.9 3.7e-48 187.6
Clacu10g0518 . 45 156 Eukaryotic Initiation Factors Gene Family AT1G54290 80.5 6.3e-48 186.8
Clacu09g1080 . 1 112 Eukaryotic Initiation Factors Gene Family AT1G54290 77.9 5.9e-46 180.3
Clacu02g0248 . 19 141 Eukaryotic Initiation Factors Gene Family AT5G35680 91.1 5.0e-61 230.7
Clacu07g1577 . 1 88 Eukaryotic Initiation Factors Gene Family AT5G35680 89.8 4.7e-43 171.0
Clacu02g0248 . 19 162 Eukaryotic Initiation Factors Gene Family AT2G04520 89.6 3.3e-65 244.6
Clacu07g1577 . 1 105 Eukaryotic Initiation Factors Gene Family AT2G04520 84.8 8.1e-48 186.8
Clacu09g1557 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.9 1.4e-116 416.0
Clacu09g1557 . 1 344 Eukaryotic Initiation Factors Gene Family AT5G05470 81.2 5.9e-158 553.9
Clacu03g0005 . 29 296 Eukaryotic Initiation Factors Gene Family AT5G20920 76.3 1.6e-110 396.0
Clacu03g0005 . 143 283 Eukaryotic Initiation Factors Gene Family AT5G01940 56.3 1.5e-38 156.8
Clacu03g0005 . 147 290 Eukaryotic Initiation Factors Gene Family AT3G07920 70.9 5.3e-56 214.2
Clacu11g0228 . 331 794 Eukaryotic Initiation Factors Gene Family AT1G04170 91.6 4.1e-247 850.5
Clacu11g0228 . 334 794 Eukaryotic Initiation Factors Gene Family AT4G18330 83.1 5.7e-220 760.4
Clacu11g0228 . 423 793 Eukaryotic Initiation Factors Gene Family AT2G18720 75.7 2.3e-163 572.0
Clacu09g0141 . 1 394 Eukaryotic Initiation Factors Gene Family AT1G53880 79.2 2.9e-169 591.7
Clacu09g0141 . 1 326 Eukaryotic Initiation Factors Gene Family AT1G72340 77.4 1.5e-134 476.1
Clacu03g1543 . 56 379 Eukaryotic Initiation Factors Gene Family AT2G05830 74.4 6.3e-133 470.7
Clacu01g0773 . 94 500 Eukaryotic Initiation Factors Gene Family AT3G07300 80.7 4.0e-177 617.8
Clacu06g1612 . 1 651 Eukaryotic Initiation Factors Gene Family AT5G38640 61.1 3.4e-199 691.8
Clacu06g1613 . 1 638 Eukaryotic Initiation Factors Gene Family AT5G38640 59.6 3.6e-193 671.8
Clacu06g1612 . 328 651 Eukaryotic Initiation Factors Gene Family AT2G44070 75.7 9.9e-142 500.0
Clacu06g1613 . 316 638 Eukaryotic Initiation Factors Gene Family AT2G44070 74.5 1.5e-137 486.1
Clacu06g1613 . 1 571 Eukaryotic Initiation Factors Gene Family AT1G48970 56.6 7.5e-167 584.3
Clacu06g1612 . 1 583 Eukaryotic Initiation Factors Gene Family AT1G48970 57.2 3.7e-166 582.0
Clacu07g1655 . 84 807 Eukaryotic Initiation Factors Gene Family AT2G34970 64.6 6.5e-239 823.9
Clacu07g1655 . 84 802 Eukaryotic Initiation Factors Gene Family AT3G02270 56.3 1.5e-181 633.3
Clacu07g1655 . 84 807 Eukaryotic Initiation Factors Gene Family AT4G18300 60.4 4.1e-206 714.9
Clacu04g1318 . 174 1112 Eukaryotic Initiation Factors Gene Family AT1G48410 83.2 0.0e+00 1563.1
Clacu05g0549 . 119 981 Eukaryotic Initiation Factors Gene Family AT1G48410 77.4 0.0e+00 1367.8
Clacu06g1130 . 99 959 Eukaryotic Initiation Factors Gene Family AT1G48410 70.5 0.0e+00 1253.8
Clacu01g1468 . 111 966 Eukaryotic Initiation Factors Gene Family AT1G48410 59.8 2.3e-301 1031.9
Clacu05g0549 . 1 981 Eukaryotic Initiation Factors Gene Family AT5G43810 82.8 0.0e+00 1654.4
Clacu04g1318 . 238 1112 Eukaryotic Initiation Factors Gene Family AT5G43810 76.4 0.0e+00 1378.6
Clacu06g1130 . 102 959 Eukaryotic Initiation Factors Gene Family AT5G43810 74.0 0.0e+00 1327.8
Clacu01g1468 . 97 966 Eukaryotic Initiation Factors Gene Family AT5G43810 56.6 1.8e-292 1002.3
Clacu03g0616 . 42 990 Eukaryotic Initiation Factors Gene Family AT4G11420 70.9 0.0e+00 1135.2
Clacu03g0619 . 24 972 Eukaryotic Initiation Factors Gene Family AT4G11420 69.9 0.0e+00 1113.2
Clacu03g1791 . 1 743 Eukaryotic Initiation Factors Gene Family AT4G11420 70.7 7.5e-238 820.8
Clacu09g1044 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G27640 76.7 0.0e+00 1135.2
Clacu09g1050 . 5 712 Eukaryotic Initiation Factors Gene Family AT5G27640 76.0 0.0e+00 1129.8
Clacu09g1050 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 74.8 0.0e+00 1110.5
Clacu09g1044 . 9 712 Eukaryotic Initiation Factors Gene Family AT5G25780 74.8 0.0e+00 1109.7
Clacu05g1107 . 794 1642 Eukaryotic Initiation Factors Gene Family AT3G56150 73.1 0.0e+00 1142.5
Clacu05g1107 . 793 1623 Eukaryotic Initiation Factors Gene Family AT3G22860 59.3 4.2e-255 877.9
Clacu01g2619 . 5 535 Eukaryotic Initiation Factors Gene Family AT4G20980 81.0 1.8e-255 878.6
Clacu01g2619 . 5 535 Eukaryotic Initiation Factors Gene Family AT5G44320 79.1 1.4e-247 852.4
Clacu04g0400 . 3 437 Eukaryotic Initiation Factors Gene Family AT3G57290 87.1 1.8e-228 788.5
Clacu11g0780 . 2 285 Eukaryotic Initiation Factors Gene Family AT2G39990 76.6 4.2e-128 454.5
Clacu05g1342 . 8 286 Eukaryotic Initiation Factors Gene Family AT3G11400 70.1 2.1e-117 419.1
Clacu04g1326 . 8 288 Eukaryotic Initiation Factors Gene Family AT3G11400 69.6 3.6e-117 418.3
Clacu05g1342 . 9 286 Eukaryotic Initiation Factors Gene Family AT5G06000 68.3 1.9e-107 386.0
Clacu04g1326 . 9 286 Eukaryotic Initiation Factors Gene Family AT5G06000 68.6 4.3e-107 384.8
Clacu07g1587 . 140 382 Eukaryotic Initiation Factors Gene Family AT1G10840 81.1 3.0e-111 398.3
Clacu10g1525 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 66.7 2.5e-92 335.5
Clacu10g1525 . 1 326 Eukaryotic Initiation Factors Gene Family AT2G46290 81.1 3.3e-159 558.1
Clacu03g1522 . 1 232 Eukaryotic Initiation Factors Gene Family AT4G33250 75.9 3.5e-98 354.8
Clacu09g0083 . 102 492 Eukaryotic Initiation Factors Gene Family AT3G13920 93.4 4.0e-209 724.2
Clacu07g1389 . 269 659 Eukaryotic Initiation Factors Gene Family AT3G13920 92.6 4.5e-208 720.7
Clacu10g1188 . 38 388 Eukaryotic Initiation Factors Gene Family AT3G13920 68.1 1.3e-135 479.9
Clacu07g1389 . 269 681 Eukaryotic Initiation Factors Gene Family AT1G72730 89.4 2.2e-215 745.0
Clacu09g0083 . 102 514 Eukaryotic Initiation Factors Gene Family AT1G72730 89.1 4.9e-215 743.8
Clacu10g1188 . 38 410 Eukaryotic Initiation Factors Gene Family AT1G72730 65.4 1.8e-140 496.1
Clacu10g1188 . 22 410 Eukaryotic Initiation Factors Gene Family AT3G19760 89.2 2.3e-201 698.4
Clacu09g0083 . 138 514 Eukaryotic Initiation Factors Gene Family AT3G19760 64.2 1.1e-139 493.4
Clacu07g1389 . 305 681 Eukaryotic Initiation Factors Gene Family AT3G19760 63.7 1.2e-138 490.0
Clacu08g1486 . 1 427 Eukaryotic Initiation Factors Gene Family AT5G11200 85.5 7.7e-225 776.5
Clacu08g1486 . 84 427 Eukaryotic Initiation Factors Gene Family AT5G11170 94.5 4.2e-188 654.1
Clacu08g1919 . 1 531 Eukaryotic Initiation Factors Gene Family AT1G13020 51.7 5.4e-113 405.2
Clacu02g1196 . 2 394 Eukaryotic Initiation Factors Gene Family AT4G38710 56.7 9.7e-79 291.2
Clacu03g0725 . 1 234 Eukaryotic Initiation Factors Gene Family AT4G18040 68.1 1.7e-92 335.9
Clacu06g0734 . 26 202 Eukaryotic Initiation Factors Gene Family AT4G18040 53.9 3.1e-57 218.8
Clacu03g0725 . 48 234 Eukaryotic Initiation Factors Gene Family AT1G29590 63.6 4.9e-74 274.6
Clacu06g0734 . 25 203 Eukaryotic Initiation Factors Gene Family AT1G29590 52.2 5.1e-55 211.5
Clacu03g0725 . 48 234 Eukaryotic Initiation Factors Gene Family AT1G29550 63.1 1.8e-73 272.7
Clacu06g0734 . 25 203 Eukaryotic Initiation Factors Gene Family AT1G29550 51.7 1.9e-54 209.5
Clacu06g0734 . 14 195 Eukaryotic Initiation Factors Gene Family AT5G35620 68.3 1.9e-71 265.8
Clacu03g0725 . 58 224 Eukaryotic Initiation Factors Gene Family AT5G35620 55.8 1.6e-51 199.5
Clacu10g1337 . 48 238 Eukaryotic Initiation Factors Gene Family AT5G18110 85.3 2.2e-97 352.1
Clacu05g0335 . 503 1428 Eukaryotic Initiation Factors Gene Family AT3G60240 50.1 3.6e-227 786.2
Clacu06g1345 . 1 810 Eukaryotic Initiation Factors Gene Family AT5G57870 62.3 1.6e-267 919.1
Clacu05g1774 . 2 768 Eukaryotic Initiation Factors Gene Family AT5G57870 58.4 2.5e-244 842.0
Clacu06g1345 . 2 810 Eukaryotic Initiation Factors Gene Family AT2G24050 54.8 2.2e-226 782.3
Clacu05g1774 . 2 769 Eukaryotic Initiation Factors Gene Family AT2G24050 56.6 3.0e-223 771.9
Clacu06g1345 . 252 442 Eukaryotic Initiation Factors Gene Family AT1G62410 52.4 5.6e-48 188.0
Clacu05g1774 . 523 769 Eukaryotic Initiation Factors Gene Family AT4G30680 50.2 2.9e-56 215.7
Clacu08g1244 . 1 445 Eukaryotic Initiation Factors Gene Family AT1G77840 63.2 8.7e-138 487.3
Clacu08g1244 . 1 445 Eukaryotic Initiation Factors Gene Family AT1G36730 68.5 7.9e-123 437.6
Clacu05g1783 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 84.3 9.7e-59 223.0
Clacu05g2592 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 2.4e-57 218.4
Clacu06g1332 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.9 4.1e-57 217.6
Clacu08g1530 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.1 4.5e-56 214.2
Clacu05g1783 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.8 3.1e-77 284.6
Clacu08g1530 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 86.8 1.2e-76 282.7
Clacu05g2592 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 83.6 4.5e-76 280.8
Clacu06g1332 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 2.9e-75 278.1
Clacu05g1783 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 91.2 9.6e-79 289.7
Clacu06g1332 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 2.6e-76 281.6
Clacu08g1530 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 89.3 2.6e-76 281.6
Clacu05g2592 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 86.2 1.0e-75 279.6
Clacu09g0963 . 338 1359 Eukaryotic Initiation Factors Gene Family AT1G76810 69.3 0.0e+00 1178.7
Clacu09g0963 . 470 1359 Eukaryotic Initiation Factors Gene Family AT1G21160 60.7 2.2e-275 945.7
Clacu02g0028 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.8 6.2e-125 443.7
Clacu06g1285 . 1 245 Eukaryotic Initiation Factors Gene Family AT3G55620 87.3 5.2e-124 440.7
Clacu02g0028 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 68.4 8.8e-95 343.6
Clacu06g1285 . 1 245 Eukaryotic Initiation Factors Gene Family AT2G39820 67.6 7.4e-94 340.5
Clacu05g1176 . 133 769 Eukaryotic Initiation Factors Gene Family AT2G23350 60.1 4.3e-205 711.4
Clacu02g0646 . 5 647 Eukaryotic Initiation Factors Gene Family AT2G23350 58.4 7.6e-202 700.7
Clacu08g0866 . 36 635 Eukaryotic Initiation Factors Gene Family AT2G23350 50.3 1.0e-150 530.8
Clacu05g1176 . 136 766 Eukaryotic Initiation Factors Gene Family AT4G34110 72.3 5.6e-255 877.1
Clacu02g0646 . 1 644 Eukaryotic Initiation Factors Gene Family AT4G34110 70.2 7.1e-250 860.1
Clacu08g0866 . 21 653 Eukaryotic Initiation Factors Gene Family AT4G34110 55.0 4.5e-172 601.7
Clacu08g0866 . 1 635 Eukaryotic Initiation Factors Gene Family AT1G22760 58.2 4.4e-194 674.9
Clacu05g1176 . 147 743 Eukaryotic Initiation Factors Gene Family AT1G22760 55.1 4.6e-167 585.1
Clacu02g0646 . 22 633 Eukaryotic Initiation Factors Gene Family AT1G22760 53.9 5.6e-165 578.2
Clacu08g0866 . 34 653 Eukaryotic Initiation Factors Gene Family AT1G71770 57.8 1.8e-190 662.9
Clacu05g1176 . 147 746 Eukaryotic Initiation Factors Gene Family AT1G71770 54.6 1.6e-167 586.6
Clacu02g0646 . 22 625 Eukaryotic Initiation Factors Gene Family AT1G71770 54.8 4.8e-167 585.1
Clacu05g1176 . 146 770 Eukaryotic Initiation Factors Gene Family AT1G49760 73.9 2.6e-258 888.3
Clacu02g0646 . 25 647 Eukaryotic Initiation Factors Gene Family AT1G49760 72.4 5.2e-251 864.0
Clacu08g0866 . 34 652 Eukaryotic Initiation Factors Gene Family AT1G49760 52.6 1.1e-163 573.9
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07920 96.2 6.6e-242 833.2
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.7 1.2e-201 699.1
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 2.3e-200 694.9
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 78.8 8.9e-200 693.0
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07930 79.6 8.3e-190 659.8
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT1G07940 96.2 6.6e-242 833.2
Clacu09g2074 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.5 2.2e-253 871.3
Clacu09g2073 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 95.1 8.3e-253 869.4
Clacu02g2154 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 1.4e-252 868.6
Clacu06g0816 . 22 447 Eukaryotic Initiation Factors Gene Family AT5G60390 96.2 6.6e-242 833.2
Clacu03g0367 . 1251 1447 Eukaryotic Initiation Factors Gene Family AT5G12110 51.0 2.6e-37 152.5
Clacu03g0367 . 1251 1445 Eukaryotic Initiation Factors Gene Family AT5G19510 61.0 1.3e-41 166.8
Clacu11g0704 . 836 1026 Eukaryotic Initiation Factors Gene Family AT1G30230 76.6 9.3e-55 210.7
Clacu03g0367 . 1257 1445 Eukaryotic Initiation Factors Gene Family AT1G30230 74.0 2.3e-53 206.1
Clacu11g0704 . 836 1026 Eukaryotic Initiation Factors Gene Family AT2G18110 78.1 1.2e-56 216.9
Clacu03g0367 . 1254 1445 Eukaryotic Initiation Factors Gene Family AT2G18110 74.9 1.3e-55 213.4
Clacu11g0204 . 49 470 Eukaryotic Initiation Factors Gene Family AT1G57720 75.1 1.1e-171 599.7
Clacu10g0700 . 1 412 Eukaryotic Initiation Factors Gene Family AT1G57720 77.7 2.6e-168 588.6
Clacu02g1877 . 77 918 Eukaryotic Initiation Factors Gene Family AT1G56070 93.9 0.0e+00 1603.2
Clacu02g1878 . 557 1398 Eukaryotic Initiation Factors Gene Family AT1G56070 93.9 0.0e+00 1603.2
Clacu02g1895 . 1 843 Eukaryotic Initiation Factors Gene Family AT1G56070 93.2 0.0e+00 1593.2
Clacu09g1065 . 1 1037 Eukaryotic Initiation Factors Gene Family AT3G22980 71.8 0.0e+00 1459.1
Clacu06g0160 . 421 854 Eukaryotic Initiation Factors Gene Family AT5G47880 88.0 2.1e-221 765.0
Clacu06g0160 . 424 856 Eukaryotic Initiation Factors Gene Family AT1G12920 89.1 9.9e-227 782.7
Clacu06g0160 . 421 856 Eukaryotic Initiation Factors Gene Family AT3G26618 90.6 1.6e-229 792.0
Clacu05g1904 . 54 787 Eukaryotic Initiation Factors Gene Family AT5G10630 54.1 1.6e-204 709.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000989 2 2 2 2 4 2 1 2 2 2 1 2 5 2 2 5 2 4 4 2 2 3 3 3 3 2 2 9 3 4 84
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48074 PF00270 DEAD 1.10E-39 CL0023 Clacu TF