Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1632 ATGTCGCCTGTTGATTCTTCACGGGAGGAAAATGTTTACATGGCCAAGTTGGCCGAACAGGCTGAACGATATGAGGAAATGGTAGAGTTCATGGAGAAAGTTGCCAAGACTGTAGATGTCGAGGAGCTGACTGTTGAGGAGAGGAATCTCCTCTCTGTTGCTTACAAGAATGTCATTGGGGCTCGGAGGGCCTCATGGAGGATTATTTCTTCCATTGAGCAGAAGGAAGAGAGTCGGGGAAATGAGGACCATGTTGCAATTATCAAGGATTACCGTGGCAAAATCGAGACTGAACTGAGCAAGATCTGTGATGGAATTTTGAGCCTACTTGAGTCTCATCTCATCCCATCAGCCTCATCTGCTGAGTCAAAGGTGTTTTATCTCAAAATGAAAGGTGATTACCACAGGTACCTGGCTGAGTTTAAGACTGGAGCTGAAAGAAAAGAAGCAGCTGAGAGCACATTGTTAGCCTACAAGTCTGCTCAGGATATTGCTCTTGCCGAATTGGCTCCTACTCATCCAATTAGGCTAGGTCTCGCTCTTAACTTCTCAGTGTTTTATTATGAGATCCTTAATTCGCCAGACCGTGCTTGCAATTTGGCAAAGCAGGCTTTTGACGAAGCAATTTCTGAGCTTGATACATTGGGTGAAGAATCATACAAGGATAGCACCTTGATCATGCAACTCCTCCGAGACAACTTGACCCTTTGGACTTCTGATATTGGGGACGAAGCTGGCGATGAGATTAAGGAAGCATCAAAACGTGAATCAGGGGAGGGACAGTAG 786 45.55 MSPVDSSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVAIIKDYRGKIETELSKICDGILSLLESHLIPSASSAESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDIGDEAGDEIKEASKRESGEGQ 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 30890091 30891683 + ClG42_07g0163200.10 Clacu07g1632 254230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1632 261 FunFam 14-3-3 protein epsilon 4 251 - -
Clacu07g1632 261 ProSitePatterns 14-3-3 proteins signature 1. 48 58 IPR023409 -
Clacu07g1632 261 SUPERFAMILY 14-3-3 protein 7 240 IPR036815 -
Clacu07g1632 261 Coils Coil 14 34 - -
Clacu07g1632 261 PIRSF 14-3-3 3 250 IPR000308 -
Clacu07g1632 261 PANTHER 14-3-3 PROTEIN 7 243 IPR000308 GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER)
Clacu07g1632 261 SMART 1433_4 8 251 IPR023410 -
Clacu07g1632 261 Gene3D - 2 251 IPR036815 -
Clacu07g1632 261 PRINTS 14-3-3 protein zeta signature 184 210 IPR000308 -
Clacu07g1632 261 PRINTS 14-3-3 protein zeta signature 122 144 IPR000308 -
Clacu07g1632 261 PRINTS 14-3-3 protein zeta signature 157 183 IPR000308 -
Clacu07g1632 261 PRINTS 14-3-3 protein zeta signature 211 240 IPR000308 -
Clacu07g1632 261 PRINTS 14-3-3 protein zeta signature 42 71 IPR000308 -
Clacu07g1632 261 PRINTS 14-3-3 protein zeta signature 91 115 IPR000308 -
Clacu07g1632 261 ProSitePatterns 14-3-3 proteins signature 2. 220 239 IPR023409 -
Clacu07g1632 261 Pfam 14-3-3 protein 14 238 IPR023410 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1632 Clacu-Chr7:30890091 Clacu11g1607 Clacu-Chr11:27240050 2.90E-117 dispersed
Clacu07g1632 Clacu-Chr7:30890091 Clacu08g1281 Clacu-Chr8:22750550 1.40E-119 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1632 K06630 - csv:101222068 501.901