Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu07g1656 | ATGCCTGCAGACAAACATGATGAGAGACATAATATGATTAAAAATTCTAAAGAAGAGAATTCACCACCTCCAAAACTAGCAGCAGCAGGAGGTTCATCAAGCTCATCGTTGGCGGCGGCCACGCCATGGCTTAGGTTGAAGGATCCGAGGATCGTGCGCGTGTCGCGAGCTTTCGGAGGCAAGGATCGACACAGCAAAGTTTGTACCATAAGAGGGCTGCGCGACAGGCGTGTAAGGCTTTCGGTTTCAACCGCAATTCAGCTCTATGATCTTCAAGACCGGCTTGGGCTTAATCAGCCGAGCAAGGTCGTCGACTGGTTGCTGAACGCCGCCAAGGATGAAATCGACGAACTCCCTCCATTGCCAATCCCATCGGCAAGCCTTGGCCTTCACTATCAATCTATGCTACCACCAACTGTGCACCACCCGCATAGATCAGAGTTCAAAATCAACTGCATCGACAAGGCCGAGGTCAAGGACGAGACCGAATTGGAAAAGCAACAGAAATCAAATAATAATTCTAATAATCCCTCTCATCCTTCTTCCTTCTCAGCCCTTTTGAACAATGTGTCTGCCCCTCCATTTGGGTTTTATTGGGATCATAATCCTCCATCATCATCGACATCATCATCAACAACAACAACAAATAATCTTCCATTTCTTACATCTCAACAACCTCAGGATAATAATAATCTTCATAACTTCAATCATCTCAATTTGTCTTTGCCTTCCCCTTTGTCTCTTGAGTTCAATCACTTGCACCAAAATTTCTTCATTAACAATAATTCTCTCAATAATACACCTCCTAATTTCCACCCCGCTGTTAGGCCTTTTCATTTTAGTATGGCTACCAAATTCCTTTCTCAAGACAAGAATAACAATAATAATGCAGATAATCCTCCAAATAAGGATCATGGCTTTGCTTCTGATGAATGA | 936 | 43.7 | MPADKHDERHNMIKNSKEENSPPPKLAAAGGSSSSSLAAATPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSASLGLHYQSMLPPTVHHPHRSEFKINCIDKAEVKDETELEKQQKSNNNSNNPSHPSSFSALLNNVSAPPFGFYWDHNPPSSSTSSSTTTTNNLPFLTSQQPQDNNNLHNFNHLNLSLPSPLSLEFNHLHQNFFINNNSLNNTPPNFHPAVRPFHFSMATKFLSQDKNNNNNADNPPNKDHGFASDE | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
7 | 31184883 | 31186394 | - | ClG42_07g0165600.10 | Clacu07g1656 | 254254 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu07g1656 | 311 | MobiDBLite | consensus disorder prediction | 160 | 185 | - | - | |
Clacu07g1656 | 311 | ProSiteProfiles | TCP domain profile. | 60 | 118 | IPR017887 | - | |
Clacu07g1656 | 311 | MobiDBLite | consensus disorder prediction | 203 | 230 | - | - | |
Clacu07g1656 | 311 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Clacu07g1656 | 311 | PANTHER | TRANSCRIPTION FACTOR TCP4-RELATED | 24 | 277 | IPR005333 | GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)|GO:2000032(PANTHER) | |
Clacu07g1656 | 311 | MobiDBLite | consensus disorder prediction | 168 | 185 | - | - | |
Clacu07g1656 | 311 | Pfam | TCP family transcription factor | 60 | 175 | IPR017887 | - | |
Clacu07g1656 | 311 | MobiDBLite | consensus disorder prediction | 289 | 311 | - | - | |
Clacu07g1656 | 311 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g2549 | Clacu-Chr1:35779635 | Clacu07g1656 | Clacu-Chr7:31184883 | 1.40E-24 | dispersed | |
Clacu03g0673 | Clacu-Chr3:7371430 | Clacu07g1656 | Clacu-Chr7:31184883 | 4.20E-24 | dispersed | |
Clacu04g1231 | Clacu-Chr4:26466391 | Clacu07g1656 | Clacu-Chr7:31184883 | 5.80E-31 | dispersed | |
Clacu06g1661 | Clacu-Chr6:27382718 | Clacu07g1656 | Clacu-Chr7:31184883 | 1.30E-33 | dispersed | |
Clacu07g1656 | Clacu-Chr7:31184883 | Clacu11g1950 | Clacu-Chr11:30481645 | 1.50E-19 | dispersed | |
Clacu11g0687 | Clacu-Chr11:6648135 | Clacu07g1656 | Clacu-Chr7:31184883 | 1.90E-11 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
48098 | PF03634 | TCP | 1.00E-27 | No_clan | Clacu | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu07g1656 | - | - | - | 0.0 |