Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1672 ATGGTCACTGCTAATGAGAATCAGAATCCCTCCAACAGGAATCGAAACAAGAAGAAGAAGAAGAAACCACAGTCCAGAGGCAGTGCAAGACTCCACCACCGACTAGCCTTGTGTAGAAGCTCTTCAAAATCAGCATTGTCAGTATGGAGAGTTTCTCCCATTTTCAAATCCCCCGCCATTATTTCCCCCAGATTCTTCTTCTCCACCGCCATGTCCACTTCCGATCACTCTCCCCCTGCCTTCGACCGACCTCGCTCCGTCATCAAGAAGATTCTTGCTAAACTCCAGCACGAAGGCGACGGCGCCGTCGTTCGTCGAGGCATCGGAAGGAATGATTTGAAGAATCTAGATCCATTTCTTATGCTCGATGATTTCTCTGTCAGTCCGCCGGCTGGATTCCCCGATCATCCTCACAGAGGTTTTGAGACAGTGACGTACATGTTACAGGGAGGGATTACCCATCAAGATTTTGCTGGCCACAAGGGTACAATCAGAACAGGGGATGTCCAGTGGATGACAGCAGGAAGAGGTATAATTCATTCAGAAATGCCTGCTGGTGAAGGATCTCAAAAGGGTTTGCAGCTTTGGATCAATCTTGCATCCCATGACAAAATGATGGAGCCAAGGTATCAAGAGATCTCAAACGACAACATTCCAAGAGCGGAGAAAGACGGTGTGGAAGTTCGTGTCATAGCAGGAGAGTCTATGGGAGTTCATTCTCCAATCTACACTAGAACTCCAACTATGTACCTTGACTTTACTTTGAAACCAAGAGCTCAAGTGCATCAAAGCATTCCAGACTCGTGGACGTCTTTCGTGTACATAATAGACGGGGAAGGAGTGTTCGGGTCGCCGAACTCATCGCGGGTGGCGGCTCACCATGTTCTAGTATTGGGAGGTGGAGATGGGGTAAGTGTGTGGAACAGATCTTCAAAACCACTGAGGTTTGTTTTGATTGCAGGGAAGCCCTTGAATGAGCCAATTGTTCAATATGGACCATTTGTTATGAACTCACAATCTGAAATTGACAAAGCAATTGAGGACTATCACTATTCCAAAAATGGGTTTGAAATGGCAAAGTATTGGAGATCTCAGTGA 1098 46.72 MVTANENQNPSNRNRNKKKKKKPQSRGSARLHHRLALCRSSSKSALSVWRVSPIFKSPAIISPRFFFSTAMSTSDHSPPAFDRPRSVIKKILAKLQHEGDGAVVRRGIGRNDLKNLDPFLMLDDFSVSPPAGFPDHPHRGFETVTYMLQGGITHQDFAGHKGTIRTGDVQWMTAGRGIIHSEMPAGEGSQKGLQLWINLASHDKMMEPRYQEISNDNIPRAEKDGVEVRVIAGESMGVHSPIYTRTPTMYLDFTLKPRAQVHQSIPDSWTSFVYIIDGEGVFGSPNSSRVAAHHVLVLGGGDGVSVWNRSSKPLRFVLIAGKPLNEPIVQYGPFVMNSQSEIDKAIEDYHYSKNGFEMAKYWRSQ 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31433186 31438272 + ClG42_07g0167200.10 Clacu07g1672 254270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1672 365 PANTHER PIRIN-RELATED 71 365 IPR012093 -
Clacu07g1672 365 CDD cupin_pirin_C 247 323 - -
Clacu07g1672 365 MobiDBLite consensus disorder prediction 1 33 - -
Clacu07g1672 365 SUPERFAMILY RmlC-like cupins 85 363 IPR011051 -
Clacu07g1672 365 FunFam pirin 98 230 - -
Clacu07g1672 365 Pfam Pirin C-terminal cupin domain 250 354 IPR008778 -
Clacu07g1672 365 CDD cupin_pirin_N 102 199 - -
Clacu07g1672 365 Gene3D Jelly Rolls 98 350 IPR014710 -
Clacu07g1672 365 MobiDBLite consensus disorder prediction 14 33 - -
Clacu07g1672 365 Pfam Pirin 104 197 IPR003829 -
Clacu07g1672 365 Gene3D Jelly Rolls 219 324 IPR014710 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1672 Clacu-Chr7:31433186 Clacu09g2121 Clacu-Chr9:35996354 1.70E-118 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1672 K06911 - csv:101205861 602.053