Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1700 ATGATGCCCAAATGTAAAACCTTCACAACAACGACAACCCATGCAAAATTAGACAAATACCAAGAACATGATGAATATGGGTCCTTCGCCGGATCTTCACGGCGGCGCGTGCTCGACCCACGCGCAGCGTGGGTCCAGCGGTGGAATCGCGTGGTTCTTCTGGCACGTGCAGCCTCGGTGGCGGTTGACCCGCTCTTCTTTTACGTCATTTTCCTCACCAAGGCTGGCTCGCCCTGCTTCTACCGGGATACGGCTATTGCTGCCGTCGTCACCGCCGTACGCACGTGCGTGGACATGGTGCACGTCTGCCACGTGTGGATGCAGTTCCGTCTGGCGTTCATTTCGACGGCGTCTTTGGTGGTGGGAAGTGGAAGCCTCGTGTGGGACGCACGTGCCATTACTTCTCACTATTTGAGGTCCTTCAGAGGCTTTTGGCTCGATTTGTTTGTCATTATTCCCATCCCTCAGTTCCTTCCAAAGCTTTACCACAGCATTTACTTGATGAAGAAGCTCCAAAAAGTCACTGGCTTTATCTTTGGCAGCATTTGGTGGCGCTTTAACCTCAATGTATTTGCCTATTTGATTGCCTCTCATGTTGTAGGTGGATGCTGGTATCTCCTTGCGACGCAACGACTAATCTCGTGCCTGGAACAAAAATGCGAGAAACGAAAAACGTGCAAATTGGCATTGTCTTGCTCCATATCTGGCTACAAGGGGGCTGGTAATTTTGGAGCTTTTTCCCATGGTAATAACTTGACAAAGATCAAGTCCTTATGCTTGGAGGTCGATGGACCCTTTAGCTATGGAATTTATGAGCCTGTTCTTTTGGTATTCTCTAGCAACTCTCTAGCTGTTAGAATTCTTTATCCTATCTTCTGGGGTTTATTGAACCTAAGTTCCTTTGGGAATGAACTTGATCCCACATGTGATTTGGTGGAAGTGATATTCAGTAGCTGCATCACACTTGGGGGATTGGTGCTGTTTGTTACCCTAATTGGAAATATACAGATTTTCTTGCAAACTGTCATGGCAAGTAAGGAGGATATGCAAATACGGTTTCGAGATATGGAGTGGTGGATGAAGAGGCGACAATTGCCCATTCATTTGAGAGAAAGAGTTCGCAATTTTGAATATCAAAGGTGGGTAGCCATGGGAGGGCTAGATGAGACCGAACTAATCGGAGGCTTGCCCGATGGCCTTCGTCGAGACATCAAACGTTACCTTTGTTTAGACCTTGTTAAGAAGGTACCCTTCTTCCACATGCTCGATGATCTCATACTCGATAACATTTGTGATCGTGTTAAACTGCTCCTATTTGCTAAAGGTGAAAAGATAGTAAGGGAGGGAGACCCTGTGCAAAGAATGGTGTTTATTATTGAAGGATGCGTGGAGCGTAGGCGAGGATGCCTAAGCAAAGGCTTTGTAGGCACCAGTTGTTGGCTCAATTCCGGTGGCTTTTTTGGGGAGGAGCTACTGTCGTGGTGTCTCCGATTTCAACACCCTCCATATTTCGATAAGCTTCCAACCTCATCGGCAACATTTACATGTTTACAGCCAGTGGAAGCATATGGCCTCGACGCATCCGATCTCAAATACATTACCAAACACTTCCGTTACATGTTTGCTACTGAAAAGCTGAAGCAAACTATGCGTTATTACTCTTCATATTGGCGAACATGGGGAGCTGTGATTATTCAGTTTTCATGGCGTCGTCATCGGACACAAAACCGACCCATGACTCACAACCGACTAAGGCAGTATCATATACAATTTTCTTATCTTTGA 1785 46.55 MMPKCKTFTTTTTHAKLDKYQEHDEYGSFAGSSRRRVLDPRAAWVQRWNRVVLLARAASVAVDPLFFYVIFLTKAGSPCFYRDTAIAAVVTAVRTCVDMVHVCHVWMQFRLAFISTASLVVGSGSLVWDARAITSHYLRSFRGFWLDLFVIIPIPQFLPKLYHSIYLMKKLQKVTGFIFGSIWWRFNLNVFAYLIASHVVGGCWYLLATQRLISCLEQKCEKRKTCKLALSCSISGYKGAGNFGAFSHGNNLTKIKSLCLEVDGPFSYGIYEPVLLVFSSNSLAVRILYPIFWGLLNLSSFGNELDPTCDLVEVIFSSCITLGGLVLFVTLIGNIQIFLQTVMASKEDMQIRFRDMEWWMKRRQLPIHLRERVRNFEYQRWVAMGGLDETELIGGLPDGLRRDIKRYLCLDLVKKVPFFHMLDDLILDNICDRVKLLLFAKGEKIVREGDPVQRMVFIIEGCVERRRGCLSKGFVGTSCWLNSGGFFGEELLSWCLRFQHPPYFDKLPTSSATFTCLQPVEAYGLDASDLKYITKHFRYMFATEKLKQTMRYYSSYWRTWGAVIIQFSWRRHRTQNRPMTHNRLRQYHIQFSYL 594
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 31777533 31781393 - ClG42_07g0170000.10 Clacu07g1700 254298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1700 594 Gene3D Jelly Rolls 416 539 IPR014710 -
Clacu07g1700 594 SUPERFAMILY Voltage-gated potassium channels 43 340 - -
Clacu07g1700 594 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 28 579 - -
Clacu07g1700 594 Gene3D Helix hairpin bin 344 409 - -
Clacu07g1700 594 ProSiteProfiles cAMP/cGMP binding motif profile. 418 492 IPR000595 -
Clacu07g1700 594 SUPERFAMILY cAMP-binding domain-like 346 538 IPR018490 -
Clacu07g1700 594 CDD CAP_ED 418 533 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1700 Clacu-Chr7:31777533 Clacu11g0608 Clacu-Chr11:5862014 1.00E-194 dispersed
Clacu07g1700 Clacu-Chr7:31777533 Clacu10g1427 Clacu-Chr10:27418634 1.20E-92 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1700 K05391 - gmx:100798823 708.368