Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1733 ATGAATTATATTCCCAACGCGGAACCAATGGCCAATACCATCTTCCCTCTCTTCCTCTTCTTCTTCTTCTTCTTCTTCCTCCACTTTCCATCGCTTTCTCCGGCCAAACTCCGCCCCGATTTCTACACCTACTCATGCCCTCAGGCGGAATCCATCGTCCGGTCTGTGATGCAGAAAGCTCTCATCAGAGAGCCTCGGAGTGTCGCCTCCGTTATGCGCTTCCAGTTTCACGATTGCTTCGTTAATGGCTGTGATGCTTCTATGCTGCTCGATGATACGCCGACCATGCTCGGAGAGAAACTCGCTCTCTCTAACATTAATTCGCTTAGATCTTACGAAGTTGTCGATGAAGTGAAGGACGCCTTGGAGAAGGTCTGTCCTGGAATCGTCTCTTGTGCAGACATCATAATTATGGCATCCAGAGACGCCGTTGCTCTCACTGGCGGCCCCAACTGGGCAGTGCGATTGGGGAGGCTGGACAGCTTAACAGCAAGCCAAGAGGACTCAAACCAGATCATGCCAAGTCCAAGAGCCAATGCAACCTCTCTCATTGACCTTTTCAACAAATACAACCTCTCTGTTAAAGATTTGGTTTCTCTTTCGGGTTCGCACTCGATCGGCCAAGGCCGGTGTTTCTCCATCATGTTTCGTCTGTACAACCAGTCCGGTACAGGGCGGCCGGACCCAGCCATCGAGCCGAGCTTCAGAGAAGAGCTCTTCAAGCGATGCCCTCAAGGTGGGGATGAAAATGTGACAGTGAACCTTGATTCCACACCTTATGTTTTTGACAATCAGTACTTCAAGGACTTGGTTGGTGGGAGAGGGTTGTTGAATTCTGATGAAACTCTTTACACATTTGGTGAAACTAGAAGGTATGTGAGATTGTTTAGCCAAAATCAAAGTGCATTTTTCAGGGCGTTTGTGGAGGGTATGTTGAAGATGGGTGACTTGCAGTCTGGCCGCCCAGGGGAAGTAAGAAGGAACTGTCGGGTAGTCAATGGCCAGTCAGTGATCATATAA 1020 49.22 MNYIPNAEPMANTIFPLFLFFFFFFFLHFPSLSPAKLRPDFYTYSCPQAESIVRSVMQKALIREPRSVASVMRFQFHDCFVNGCDASMLLDDTPTMLGEKLALSNINSLRSYEVVDEVKDALEKVCPGIVSCADIIIMASRDAVALTGGPNWAVRLGRLDSLTASQEDSNQIMPSPRANATSLIDLFNKYNLSVKDLVSLSGSHSIGQGRCFSIMFRLYNQSGTGRPDPAIEPSFREELFKRCPQGGDENVTVNLDSTPYVFDNQYFKDLVGGRGLLNSDETLYTFGETRRYVRLFSQNQSAFFRAFVEGMLKMGDLQSGRPGEVRRNCRVVNGQSVII 339
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32035101 32036980 - ClG42_07g0173300.10 Clacu07g1733 254331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1733 339 ProSitePatterns Peroxidases proximal heme-ligand signature. 196 206 IPR019793 -
Clacu07g1733 339 Pfam Peroxidase 53 299 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 FunFam Peroxidase 174 314 - -
Clacu07g1733 339 PANTHER PEROXIDASE 72-RELATED 24 332 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 CDD secretory_peroxidase 36 332 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu07g1733 339 PRINTS Haem peroxidase superfamily signature 68 82 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Haem peroxidase superfamily signature 148 160 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Haem peroxidase superfamily signature 196 211 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Haem peroxidase superfamily signature 130 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Haem peroxidase superfamily signature 255 270 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 ProSiteProfiles Plant heme peroxidase family profile. 36 333 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 SUPERFAMILY Heme-dependent peroxidases 37 333 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 Gene3D Peroxidase, domain 2 174 314 - -
Clacu07g1733 339 PRINTS Plant peroxidase signature 110 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 195 207 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 46 65 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 148 163 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 129 139 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 70 90 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 269 286 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 309 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 PRINTS Plant peroxidase signature 253 268 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu07g1733 339 FunFam Peroxidase 40 183 - -
Clacu07g1733 339 Gene3D - 40 333 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1733 Clacu-Chr7:32035101 Clacu11g0236 Clacu-Chr11:2127974 1.40E-71 dispersed
Clacu07g1733 Clacu-Chr7:32035101 Clacu07g0875 Clacu-Chr7:21869346 4.90E-80 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1733 K00430 - csv:101211442 582.793