Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu07g1741 ATGGGATCATCGGTGAGCGATGAGGAAGCCCAGCTGTTTGCTATGCAAATGGCTAGCGCGTCTGTGCTTCCAATGGTGCTGAAGGCGGCGATTGAGCTGGATTTGCTGGAAATCATTGGGAGGGGCGGGGAGGGGGCTGTGTTATCCCCATCCCAAATCGCTTCCCAGCTATCAGGGGTTAAAAACCCAGAGGCCCACGTGATGCTAGACCGCATGTTGCGCCTGCTGGCCAGCTACTCCATCCTCACTTACTCCCTCAATACCCTCCCCGATGGCACCGTGGAGAGGCTCTATGGCCTCGCCCCTGTCTCCAAGTTCTTGATCAACAATGAAGACGGTGTCTCTATTGCCCCTCTTTGTCTCATGAATCAAGATAAAGTCCTTATGGAGAGCTGGTACCATTTGAAAGATGCAGTACTTGAAGGAGGGATTCCCTTCAACAGAGCCTACGGAATGGGGGCGTTCCAATACCATGGAACAGATCCAAGATTCAACAAGGTGTTCAACAAGGGAATGTCCGACCATTCCACCATTACCATGAAGAAGATTCTGGAGACCTACAAAGGGTTTGAAGGGCTTAATTCAGTGGTGGATGTTGGGGGTGGCACCGGAGCGGTTCTCCACATGATAGTTTCCAAGTACCCTTCTATTAGGGGCATCAACTTCGACCTCCCTCATGTCATTGAGGATGCCCCTGCCTACCCAGGCGTGGAACATGTTGGGGGCGACATGTTTGACAGCGTTCCAAAGGGGGATGCCATTTTCATGAAGTGGATCTGCCACGATTGGAGCGACCACCACTGCCTCAAGTTCTTGAAGAATTGCTACGATGCGCTGCCGCAGCAGGGCAAGGTGATTGTGGCGGAATGCATTCTTCCGGTAGCACCGGACAGCAGCCTCGCCACCAAGGGAGTCATTCACATCGACCTCATAATGCTGGCTCACAACCCCGGAGGCAAAGAAAGGACCGAGAATGAGTTTCAAGCCTTGTCTAAGGCTGCAGGATTTCATGGTTTCAAGGTCCACTGCTGTGCTTTTAACACTTATGTCATGGAATTTCTCAAGACACCTTAG 1074 51.96 MGSSVSDEEAQLFAMQMASASVLPMVLKAAIELDLLEIIGRGGEGAVLSPSQIASQLSGVKNPEAHVMLDRMLRLLASYSILTYSLNTLPDGTVERLYGLAPVSKFLINNEDGVSIAPLCLMNQDKVLMESWYHLKDAVLEGGIPFNRAYGMGAFQYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLNSVVDVGGGTGAVLHMIVSKYPSIRGINFDLPHVIEDAPAYPGVEHVGGDMFDSVPKGDAIFMKWICHDWSDHHCLKFLKNCYDALPQQGKVIVAECILPVAPDSSLATKGVIHIDLIMLAHNPGGKERTENEFQALSKAAGFHGFKVHCCAFNTYVMEFLKTP 357
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
7 32103587 32104660 - ClG42_07g0174100.10 Clacu07g1741 254339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu07g1741 357 FunFam Caffeic acid 3-O-methyltransferase 1 107 - -
Clacu07g1741 357 Pfam Dimerisation domain 25 77 IPR012967 GO:0046983(InterPro)
Clacu07g1741 357 PIRSF O-mtase 2 355 IPR016461 GO:0008168(InterPro)
Clacu07g1741 357 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 15 355 IPR016461 GO:0008168(InterPro)
Clacu07g1741 357 Gene3D - 2 107 IPR036388 -
Clacu07g1741 357 Pfam O-methyltransferase domain 132 336 IPR001077 GO:0008171(InterPro)
Clacu07g1741 357 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 353 IPR029063 -
Clacu07g1741 357 FunFam Caffeic acid O-methyltransferase 108 355 - -
Clacu07g1741 357 Gene3D Vaccinia Virus protein VP39 108 355 IPR029063 -
Clacu07g1741 357 SUPERFAMILY Winged helix DNA-binding domain 6 110 IPR036390 -
Clacu07g1741 357 CDD AdoMet_MTases 196 287 - -
Clacu07g1741 357 PANTHER O-METHYLTRANSFERASE 9 344 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g1741 Clacu-Chr7:32103587 Clacu10g0403 Clacu-Chr10:5108521 2.40E-114 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu07g1741 K13066 - csv:101204109 674.47