Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g0134 ATGGCTCCATCAATTTTTCTTCATGTGTTCTTCTATATGGCTCATTTTTCTTTTGCAGATTCTACAATTTTATATAATGGATTTCGCGAGGCAACAAGATTGATTCTTGATGGCGCGGCGGTTGTTAAGCCGTCTGGTGCCTTACGCCTCACCGACAATTCACAAAATGTAGTAGGCCATGCCTTCTTTCCTGATGCAGTTAAAATGTTTGATAAAAGTTCTCCTTCATATCCCAACGCTTCATCTTTCAGTACAACTTTTGTGTTTGCTATCGAACCTTCAAGCCCTGGCCAAGGTGGGCACGGCTTAGCCTTCACCTTGGCTCCATCAACCAAGTTTGATGGAGCTGAAAGTGGACACTACCTCGGCTTATTCAACCCGGTCAATGATGGAAACCCATCCAACCATATAATCGCTGTCGAATTCGACACTGTTAATGGTCATGGTGAAGGAAGGAATTCCAGAGGAAACCATATTGGGATTAACATCAATGGCATTTCATCAGTTACATCTAGTCCAACTTCTTCTTCCTATTATCTTACTGATGATACAATTTGGAGAGAAATTCAAATTGATTCTGGTGATAAATTCGCTGTTTGGATTGAATATGATGCTCTAAGTAGAATTTTGAACGTCACTATAGGTTTTATGGAGCAAAAGCCAGAAAAGCCACTCATCTCATATCCTATTGATCTAACATCTGTTGTGAAGGAACAAATGTTCGTGGGGTTTGCCGCATCGACCGGGATCGAAACAAGCTCTCATTACATTTTGGGATGGAGCTTTGCAGTCAATGCACCGGCGCGGCAACTGTGGTACTCTCGCCTTCCCGACGGACCAAAAGAACAAAATCTTTCTTCTTCATCCAATAATCCCCAGTTGAAAGTTGTTCTAGCCGTTTCAACTATTGTGGCCATTTTGGGAATTGTTTTCTTAACCTTCTTGTTTATAAGAATGAAGAAGACAGAGAACTTGGAGGACTGGGAAAGAGATTGCCCTCACAGATTCAACTACAAGGATCTTTACACAGCAACTAATGGATTTAATGATAGTGAGCTAATTGGAATTGGGGGATTTGGGTCAGTATATAAAGGCAAGTTACGTTCAACTGGAGCTGAGATTGCTGTGAAGAGAGTCAAACGAAACTCAAGCCAAGGAATGAAGGAATTCGCTGCGGAAATCGAAAGCTTGGGACGATTAAGACACAAGAACTTGGTTAATCTTCAAGGATGGTGCAAGAAAAAGAACGATCTTCTCATAGTTTATGATTATATTCCAAATGGGAGTCTTCATTCTCTTCTCTATACTCCAAAACAGAGCTTGGTATTGAAATGGGAGCAAAGATTCAACATCCTTAAAGGCATTGCTGCAGGATTACTATATCTTCATGAAGATTGGGAGCAAGTAGTGATCCACCGAGACGTAAAGCCAAGCAATGTTCTGATTGACGCTGACATGAATGCCCGGTTGAGCGATTTCGGATTGTCCAGGCAATACGACCACGACGAAATATCACACACGACTCGAGTCGTCGGCACAATAGGCTACATACCACCAGAGTTGTTTCGCACGGGGAAGGCGTCGAAGAGCGCGGATGTGTTTGCATATGGAGTTCTGCTGCTAGAAGTGGCATGTGGAAGAAAGCCTCTAGGATCAAACCAATTCATATTGGTGGACTGGGTGATGGAATGGTATGAAAGAGGGGACATTCTTTATGTGGTTGATTCAAAATTGGATTCAATTTATAAGGTGGAAGAGATGGAGATGGTGTTGCAACTTGGCCTTCTTTGTACGCATTGGAAACTAGAAGCTCGACCGTCAATGAGACAAGTCATGAGGTTCCTTAATGGAGAAGATCCACTTCCTGCATTCGATGCGTGGGCTAGTTCTCAAAGTATCTTCGAACCTACTTCGAGCTTGACAATGAATGATCGCTCATCGGCCCTGTCCATCGGCCTTATCTCCTCTGCCTCCATAAACGTAGGTAGATAG 1992 42.87 MAPSIFLHVFFYMAHFSFADSTILYNGFREATRLILDGAAVVKPSGALRLTDNSQNVVGHAFFPDAVKMFDKSSPSYPNASSFSTTFVFAIEPSSPGQGGHGLAFTLAPSTKFDGAESGHYLGLFNPVNDGNPSNHIIAVEFDTVNGHGEGRNSRGNHIGININGISSVTSSPTSSSYYLTDDTIWREIQIDSGDKFAVWIEYDALSRILNVTIGFMEQKPEKPLISYPIDLTSVVKEQMFVGFAASTGIETSSHYILGWSFAVNAPARQLWYSRLPDGPKEQNLSSSSNNPQLKVVLAVSTIVAILGIVFLTFLFIRMKKTENLEDWERDCPHRFNYKDLYTATNGFNDSELIGIGGFGSVYKGKLRSTGAEIAVKRVKRNSSQGMKEFAAEIESLGRLRHKNLVNLQGWCKKKNDLLIVYDYIPNGSLHSLLYTPKQSLVLKWEQRFNILKGIAAGLLYLHEDWEQVVIHRDVKPSNVLIDADMNARLSDFGLSRQYDHDEISHTTRVVGTIGYIPPELFRTGKASKSADVFAYGVLLLEVACGRKPLGSNQFILVDWVMEWYERGDILYVVDSKLDSIYKVEEMEMVLQLGLLCTHWKLEARPSMRQVMRFLNGEDPLPAFDAWASSQSIFEPTSSLTMNDRSSALSIGLISSASINVGR 663
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 2565546 2567537 + ClG42_08g0013400.10 Clacu08g0134 254476
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g0134 663 Pfam Legume lectin domain 24 271 IPR001220 GO:0030246(InterPro)
Clacu08g0134 663 Pfam Protein kinase domain 349 612 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu08g0134 663 FunFam serine/threonine-protein kinase PBS1-like 317 424 - -
Clacu08g0134 663 SUPERFAMILY Protein kinase-like (PK-like) 332 640 IPR011009 -
Clacu08g0134 663 PANTHER - 27 623 IPR050528 GO:0002229(PANTHER)|GO:0004675(PANTHER)|GO:0005886(PANTHER)|GO:0042742(PANTHER)
Clacu08g0134 663 SMART serkin_6 348 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu08g0134 663 CDD lectin_legume_LecRK_Arcelin_ConA 25 265 IPR001220 GO:0030246(InterPro)
Clacu08g0134 663 CDD STKc_IRAK 354 617 - -
Clacu08g0134 663 Gene3D Phosphorylase Kinase; domain 1 333 424 - -
Clacu08g0134 663 FunFam L-type lectin-domain containing receptor kinase V.9 20 267 - -
Clacu08g0134 663 ProSitePatterns Protein kinases ATP-binding region signature. 354 377 IPR017441 GO:0005524(InterPro)
Clacu08g0134 663 ProSitePatterns Legume lectins beta-chain signature. 138 144 IPR019825 -
Clacu08g0134 663 Gene3D Transferase(Phosphotransferase) domain 1 425 620 - -
Clacu08g0134 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 470 482 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Clacu08g0134 663 FunFam L-type lectin-domain containing receptor kinase S.4 425 627 - -
Clacu08g0134 663 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 280 IPR013320 -
Clacu08g0134 663 ProSiteProfiles Protein kinase domain profile. 348 624 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Clacu08g0134 663 Gene3D - 16 267 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu08g0134 Clacu-Chr8:2565546 Clacu10g2200 Clacu-Chr10:35075347 7.50E-226 dispersed
Clacu08g0134 Clacu-Chr8:2565546 Clacu10g2199 Clacu-Chr10:35070479 2.80E-257 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
73733 PF00069 Pkinase 8.50E-51 CL0016 Clacu PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g0134 - - - 0.0