Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g0693 ATGGCCAATGACCAGCTCCAGCTTCTGACTGTCCTTGACCGTGCAAAGACCCAATTCTACCATTTCACGGCGGTGGTAATCGCCGGAATGGGCTTCTTCACCGATTCCTACGATCTCTTCTGCATCTCTCTCGTCACAAAACTCCTCGGCCGCATTTACTACACCATCGAAGGCTCCCCCCGTCCCGGAACCCTCCCTCCCGCCGTCGCCGCCGCCGTAAACGGCGTCGCCCTCGCCGGCACTCTCGCCGGTCAACTCTTCTTCGGCTGGCTCGGCGACAAGCTCGGCCGGAAGCGCGTCTATGGCCTCACCCTCATCCTCATGGTCGTCTGTTCCATCGCCTCCGGTCTCTCCTTCAGCAGCTCTCCGACCGCCGTCATCACCACTCTCTGTTTCTTCCGATTCTGGCTTGGCTTCGGAATCGGCGGCGACTACCCTTTATCCGCTACCATCATGGCCGAATACTCCAACAAAAAAACCCGAGGTGCCTTCATAGCCGCCGTCTTCGCAATGCAGGGATTTGGAATTCTGGCCGGCGGCACGGTAGCAATTGTAATCTCGTCAATTTTCAAGACCCTTTTTAAAGCTCCACCGTACGCGGTGGACGCCATGAAGTCGACGGTTCCAGAAGCGGATTACGTATGGAGAATTATACTAATGTTGGGTTCTTTGCCTGCGGTTTTAACTTACTATTGGCGGATGAAAATGCCCGAAACGCCGCGTTACACTGCCTTGGTTGCGAACGACAATAAGAAAGCTTGTGACGACATGTCGAAAGTGTTGAATTTGGAAATTGGTCAACATGTGGTAAATGAAACCCAAATTAAAACAGACTCCAACTCGAATTCAAATTCATTTGGGTTTTTTAGTAAGAAATTTATTCAAAGACATGGGATTCATCTTTTAGGAACTGCCACTACTTGGTTTTTAATCGACGTGGCATATTATAGCCAAAATTTATTCCAAAAAGACATTTTTAGTGCCGTGGGTTGGTTGCCACAGCCCAAAACAATGAGTGCTTTAGAAGAGGTTTTCAAAATCGCCAAGGCTCAGACACTTATTGCCCTTTGTGGGACCGTTCCGGGCTATTGGGCCACGGTTCTTCTAATAGACCGGGTTGGTCGGTTTTTTATTCAGGTGGTTGGGTTTTTCTTCATGACGGTTTTTATGTTTGCGCTTGCTATTCCCTACCATCATTGGACCGGGAACCATGTGGGGTTTGTTGTTATGTATGGCCTTACTTTTTTCTTTGCTAATTTTGGTCCTAATAGTACTACCTTTGTTGTCCCTGCTGAGATTTTTCCGGCCCGGTTCCGGTCCACTTGTCATGGGATATCGGCTGCAGCTGGGAAAGCCGGAGCTATCTTTGGAGCTTTTGGGTTCTTGTATGCGGCTCAGAGTCAGGACCCGACAAAGACCGATGCCGGCTACCCACCCGGGATTGGAATGAGGAATTCTTTGATCATTTTGGGAGTTGTTAATGTGTTTGGATTGCTTTTTACTTTTTTGGTTCCGGAATCTAAAGGGAAGTCTTTGGAAGAAATGTCGAAGGAGGATCAAGTTGAAGAAGAACATGAAGAAAGTAAGGAGCAAGTTAATGGAGTTGAACAGGTTTAG 1617 48.61 MANDQLQLLTVLDRAKTQFYHFTAVVIAGMGFFTDSYDLFCISLVTKLLGRIYYTIEGSPRPGTLPPAVAAAVNGVALAGTLAGQLFFGWLGDKLGRKRVYGLTLILMVVCSIASGLSFSSSPTAVITTLCFFRFWLGFGIGGDYPLSATIMAEYSNKKTRGAFIAAVFAMQGFGILAGGTVAIVISSIFKTLFKAPPYAVDAMKSTVPEADYVWRIILMLGSLPAVLTYYWRMKMPETPRYTALVANDNKKACDDMSKVLNLEIGQHVVNETQIKTDSNSNSNSFGFFSKKFIQRHGIHLLGTATTWFLIDVAYYSQNLFQKDIFSAVGWLPQPKTMSALEEVFKIAKAQTLIALCGTVPGYWATVLLIDRVGRFFIQVVGFFFMTVFMFALAIPYHHWTGNHVGFVVMYGLTFFFANFGPNSTTFVVPAEIFPARFRSTCHGISAAAGKAGAIFGAFGFLYAAQSQDPTKTDAGYPPGIGMRNSLIILGVVNVFGLLFTFLVPESKGKSLEEMSKEDQVEEEHEESKEQVNGVEQV 538
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 16525829 16527445 - ClG42_08g0069300.10 Clacu08g0693 255035
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g0693 538 Gene3D MFS general substrate transporter like domains 272 533 IPR036259 -
Clacu08g0693 538 Gene3D MFS general substrate transporter like domains 20 266 IPR036259 -
Clacu08g0693 538 CDD MFS_PhT 25 508 - -
Clacu08g0693 538 FunFam Inorganic phosphate transporter 1-6 20 531 - -
Clacu08g0693 538 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 15 514 - -
Clacu08g0693 538 Pfam Sugar (and other) transporter 26 517 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
Clacu08g0693 538 SUPERFAMILY MFS general substrate transporter 12 518 IPR036259 -
Clacu08g0693 538 NCBIfam phosphate:H+ symporter 12 518 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
Clacu08g0693 538 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 509 IPR020846 GO:0022857(InterPro)
Clacu08g0693 538 MobiDBLite consensus disorder prediction 510 538 - -
Clacu08g0693 538 Coils Coil 518 538 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0111 Clacu-Chr7:1569448 Clacu08g0693 Clacu-Chr8:16525829 5.00E-236 dispersed
Clacu08g0693 Clacu-Chr8:16525829 Clacu11g2079 Clacu-Chr11:31635177 4.00E-137 dispersed
Clacu08g0693 Clacu-Chr8:16525829 Clacu07g0092 Clacu-Chr7:1336078 7.70E-229 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g0693 K08176 - csv:101205342 940.643