Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g0842 ATGGATCCCAACAAATTAAACCTAAGTACTTTGGAGCAACAATCCAATTTGGAGATCCAAACAAAGGAATTCGACTACTCGAAACGTGCACAATGGCTACGTGCTGCCGTGCTTGGTGCCAACGACGGGCTCGTCTCGACCGCGTCGCTTATGATGGGAGTTGGAGCTGTGAAACAAGACATCAAGGCCATGATCCTCACCGGTTTTGCCGGGCTAGTTGCGGGGGCGTGTAGTATGGCGATCGGGGAGTTTGTGTCTGTTTACTCTCAATTAGACATTGAAATGGCTCAAATAAAAAGAGAGAAATTACAAAGAAGTAGTAATATAGAAGGAGTAGTACAAGGGCAAGAGAGCAAAGATGAAGAAAAATTACCAAATCCACTTCAAGCAGCTGCAGCCTCTGCCTTAGCTTTCTCTCTAGGAGCAATGGTGCCATTATTGGCAGCTTCCTTTATAAGAGAATATAAAGTAAGGCTGGCGGTGGTTGTGGCAGCGGTGACGTTAGCTCTCGTCGTGTTCGGGTGGTTGGGCGCGGTCCTTGGAAAAGCATCACCGATCAAATCGGCCGCTAGAGTGTTGGTCGGAGGTTGGTTAGCTATGGCTATAACGTTTGGCTTGACAAAGCTAATCGGAGCAAGCGGACTCTAG 648 47.84 MDPNKLNLSTLEQQSNLEIQTKEFDYSKRAQWLRAAVLGANDGLVSTASLMMGVGAVKQDIKAMILTGFAGLVAGACSMAIGEFVSVYSQLDIEMAQIKREKLQRSSNIEGVVQGQESKDEEKLPNPLQAAAASALAFSLGAMVPLLAASFIREYKVRLAVVVAAVTLALVVFGWLGAVLGKASPIKSAARVLVGGWLAMAITFGLTKLIGASGL 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 18461279 18461926 + ClG42_08g0084200.10 Clacu08g0842 255184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g0842 215 Pfam VIT family 33 110 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Clacu08g0842 215 Pfam VIT family 120 207 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Clacu08g0842 215 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 11 211 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu08g0842 Clacu-Chr8:18461279 Clacu09g0964 Clacu-Chr9:9035772 1.30E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g0842 K22736 - csv:101204048 370.933