Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g0930 ATGGAGGTTTCCGGCAGCGGCGGCGGCGGAGGAAGTTCATCAAGCGAGAAACGGCGTCGTTCGCTCAGAGAAATCACGACCTCCTTCTTCATCGACGTACTAACCGGACCTTGGTTCATGGTGTTCGCTTCATTCCTCGTCATGTCCACCGCCGGAACGCCGTACATGTTCGGACTTTACTCCGGCGCCATAAAATCCGTCCTCGGCTACGATCAGAGCACTCTGAATCTAATCAGTTTTTTCAAAGACCTAGGAACGAACGTCGGCGTAATTTCCGGCCTAATCGCCGAAATTACGCCGCCGTGGGTGGTTCTAGCGATCGGCGCGGCGATGAACTTCGTCGGATACTTCATGATTTGGTTATCGGTGACGGAAAAAGTGGCGGCGCCGTCGGTGTGGCTGATGTGTCTTTACATTTGCTTAGGGGCAAATTCGACGGCGTTTGCGAACACCGGGGCTTTAGTGACTTGTGTGAAGAATTATCCGGCGAGAAGAGGAGCGGTTTTAGGGATTTTGAAAGGATATGTTGGATTAAGCGGAGCAATTTTGACGCAATTCTATCATGCGATTTATGGTGATGATTCGAAATCGTTGATTCTTCTTATTGCTTGGCTTCCGGCGGTTATTTCTGTGGTGTTCTTGAGGACGATTCGGGTTATGAAGGTTCAACATCAGCCTAATGAACTCACAGTTTTCTACAGGTTCTTGTACATTTCTCTTGGCCTAGCCGGATTTCTCATGGTGATGATCGTTCTTCAGCAGAAATTCAAATTCTCCCACATCGAATACAGTTCCAGCGCCGCCGTCGTCGTCTTCCTCCTCTTCTTTCCGATCTTCATCGTCATCGCCGAAGATTACAAATTCTGGCGCAAAAAGCTATCTCAACTCCAAAATCCTTCTCCACTCACCATCATCACTCAAAAACCGCCGCCGTCGCAACAGTTCCCAATCAACCTCGAAACCTCCAACACATCTCCCGCCGGACAACCAAAGCCACAAACGCTATCCTGCTGGAGAACCGCCCTAAATCCGCCGCCAAGAGGCGAAGATTACACGATTCTACAAGCGCTCTTTAGCGCCGACATGCTCCTCCTATTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGCTTCTCTACGGTATCCTAAACAGAGCATTAGCACATTTGTATCATTAGTCAGTATTTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCACCTCAGAAATTTTCCTCACCAAATACAAATTCCCACGAACCCTAATTCTAACCCTAATTCTCCTCCTCTCTTGCGTCGGCCACCTCCTAATCGCCTTCAATCCTCCCGGCGGCCTCTACTTCGCTTCAATCGTCATCGGATTCTGCTACGGTGCTCAATGGCCGATTCTATTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACACTTTACAATTTCGGATCCGCCGCGAGTCCGATCGGGTTGTATTTCGTCAATGTTCGAGTCGCCGGACATTTGTACGACAAGGAGGCCGACCGGCAAATGGCGGCGGCAGGGAGGACGAGGATAGCCGGAGAAGAGTTGAACTGCGTTGGCGTTAATTGCTTTAAAATGTCGTTCATTATAATCACCGGAGTTACTTTGATTGGAGCTCTGTTTTCATTCATTTTGGTTCTTAGAACCAAAGGTTTTTATAAGACTGATATTTATAGGAGGTTTAGGGATGAGGTTGAAGAAGAAGCAGCTGCTGGAAACGACGTCGTTTCAAATGATGATAGAAATGTAGAAGGCAACAAGTAA 1821 49.09 MEVSGSGGGGGSSSSEKRRRSLREITTSFFIDVLTGPWFMVFASFLVMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLISFFKDLGTNVGVISGLIAEITPPWVVLAIGAAMNFVGYFMIWLSVTEKVAAPSVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGAVLGILKGYVGLSGAILTQFYHAIYGDDSKSLILLIAWLPAVISVVFLRTIRVMKVQHQPNELTVFYRFLYISLGLAGFLMVMIVLQQKFKFSHIEYSSSAAVVVFLLFFPIFIVIAEDYKFWRKKLSQLQNPSPLTIITQKPPPSQQFPINLETSNTSPAGQPKPQTLSCWRTALNPPPRGEDYTILQALFSADMLLLFLSTACGVGGTLTAIDNLGQIGASLRYPKQSISTFVSLVSIWNYLGRVVSGFTSEIFLTKYKFPRTLILTLILLLSCVGHLLIAFNPPGGLYFASIVIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSAASPIGLYFVNVRVAGHLYDKEADRQMAAAGRTRIAGEELNCVGVNCFKMSFIIITGVTLIGALFSFILVLRTKGFYKTDIYRRFRDEVEEEAAAGNDVVSNDDRNVEGNK 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 19443626 19447213 + ClG42_08g0093000.10 Clacu08g0930 255272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g0930 606 Pfam Nodulin-like 37 282 IPR010658 -
Clacu08g0930 606 SUPERFAMILY MFS general substrate transporter 235 571 IPR036259 -
Clacu08g0930 606 SUPERFAMILY MFS general substrate transporter 40 284 IPR036259 -
Clacu08g0930 606 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 37 581 - GO:0016020(PANTHER)
Clacu08g0930 606 Gene3D MFS general substrate transporter like domains 357 573 IPR036259 -
Clacu08g0930 606 CDD MFS_Mch1p_like 36 558 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu04g0263 Clacu-Chr4:8129539 Clacu08g0930 Clacu-Chr8:19443626 5.10E-159 dispersed
Clacu05g2321 Clacu-Chr5:31561976 Clacu08g0930 Clacu-Chr8:19443626 2.80E-194 dispersed
Clacu05g2322 Clacu-Chr5:31572034 Clacu08g0930 Clacu-Chr8:19443626 3.00E-218 dispersed
Clacu08g0930 Clacu-Chr8:19443626 Clacu10g1976 Clacu-Chr10:33278980 6.50E-192 dispersed
Clacu10g1973 Clacu-Chr10:33252910 Clacu08g0930 Clacu-Chr8:19443626 3.90E-194 wgd
Clacu05g2320 Clacu-Chr5:31550671 Clacu08g0930 Clacu-Chr8:19443626 3.50E-219 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g0930 - - - 0.0