Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g1206 ATGTCATCACAAACCTTCAACTCTCTTCTTCTTTATTTCCCCATTTCCATTTCCCAAAGCTTCGAAGCTTTTCTTCTTACCCTTTTTCTCCTCTCCATTTTCGCCTTCTTCTTTCATCCCGGTGGCTTCGCTTGGGCCGTTTCCAAGTTCAAAACCACCGCCTCCACCGCCATCCCTGGCCCTTCCGGCCTCCCATTCATCGGGCTTCTCCATGTCTTCACTCTTTCAACTCCTCACAAAGCCCTCTCTGCCCTTGCTAATCGATTCAAAGCATACCCATTAATGGCTTTCTCTGTTGGGTTAACTAGATTTGTGATTTCTAGTAATCCTGATGTTGCTAAAGAGATTCTTAACAGCCCTGCCTTTGCTGATAGACCCGTGAAAGAGTCTGCTTATGAACTTCTTTTCAACAGAGCAATGGGGTTTGCTCCTTATGGTGAGTATTGGAGGAATTTGAGAAGGATTTCAGCTACTTATATGTTTAGTCCTAAGAGAATAGCTGGGTTTGAAGGGTTTAGGAAAGAAGTTGGGGTTAAAATGGTTAGGGAAATTGAGAAATCTATGGTTTTAAAAGGGGATGTGAGGGTTAAAGAGATTCTTCATTTTGGGTCTTTGAATAATGTTATGATGACTGTTTTTGGGAAATGTTATGAGTTTTGTAATGGGGATAGAGATGGGGTTGAGCTTGAAGAGTTGGTTAAAGAAGGGTATGATTTGCTTGGGATTTTCAATTGGAGTGACCATTTTCCTTTATTGGGTTTCTTGGATTTACAAGGTGTGAGGAAAAGATGTAGGTGTTTGGCTTCTAAAGTGAATGTATTTGTGGGAAAAATCATCGAGGAACATAGAATGAAAAGGGAAATCAAGGGATATCATCAACAAGAACATAACAAAGACTTTGTTGATGTTCTGCTTGATTTGGAGAAAGATGATAAACTCTCAGATTCTGACATGATTGCTGTTCTTTGGGAAATGATATTTAGAGGAACTGACACAGTAGCCATACTTTTGGAATGGATTTTAGCAAGAATGGTGATACACCAAGATATCCAAACCAAAGCCCAAAATGAAATTGATTCAGTAATAGGCAAGAAATGGAGAGCCATTTCAGATACTGATATCCAAAACCTTCCATATCTTCAAGCCATTGTGAAGGAATGTCTAAGAATGCACCCACCAGGACCACTTCTGTCATGGGCAAGGCTAGCTGTGGCGGATGTGCACGTCGATGGGAGAGTGATACCGGCGGGGACGACGGCGATGGTGAACATGTGGGCAATAACTCATAATGAAAAAGTATGGAGAGATGCAGAGAAGTTTGATCCAAATAGATTCATAGAAGAGGAAATTAGTGTAATGGGAAGTGATTTGAGATTGGCTCCATTTGGGGCAGGGAGAAGAGTTTGCCCTGGAAAAGCAATGGGATTGGCTACTGTCCATCTCTGGTTGGCTCAGTTGCTTCAAGCTTACAAATGGATGCCTTGTTCTGAAGAAGCCATTAATGGTGTTGACCTGTCAGAATGCCTTAAACTCTCTCTGGAAATGAAAACTCCATTGGTTTGCAGAGCTGTTCCCAGGGCTGGTTGGGGAGAGGACTGA 1599 42.09 MSSQTFNSLLLYFPISISQSFEAFLLTLFLLSIFAFFFHPGGFAWAVSKFKTTASTAIPGPSGLPFIGLLHVFTLSTPHKALSALANRFKAYPLMAFSVGLTRFVISSNPDVAKEILNSPAFADRPVKESAYELLFNRAMGFAPYGEYWRNLRRISATYMFSPKRIAGFEGFRKEVGVKMVREIEKSMVLKGDVRVKEILHFGSLNNVMMTVFGKCYEFCNGDRDGVELEELVKEGYDLLGIFNWSDHFPLLGFLDLQGVRKRCRCLASKVNVFVGKIIEEHRMKREIKGYHQQEHNKDFVDVLLDLEKDDKLSDSDMIAVLWEMIFRGTDTVAILLEWILARMVIHQDIQTKAQNEIDSVIGKKWRAISDTDIQNLPYLQAIVKECLRMHPPGPLLSWARLAVADVHVDGRVIPAGTTAMVNMWAITHNEKVWRDAEKFDPNRFIEEEISVMGSDLRLAPFGAGRRVCPGKAMGLATVHLWLAQLLQAYKWMPCSEEAINGVDLSECLKLSLEMKTPLVCRAVPRAGWGED 532
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
8 21978404 21980391 - ClG42_08g0120600.10 Clacu08g1206 255548
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g1206 532 FunFam Cytochrome P450 78A5 50 526 - -
Clacu08g1206 532 CDD CYP78 90 519 - -
Clacu08g1206 532 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS E-class P450 group I signature 381 399 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 SUPERFAMILY Cytochrome P450 58 526 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 Gene3D Cytochrome P450 46 522 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 Pfam Cytochrome P450 59 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PANTHER CYTOCHROME P450 78A7-RELATED 21 523 IPR051996 -
Clacu08g1206 532 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu08g1206 532 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS P450 superfamily signature 382 393 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1206 532 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu08g1206 Clacu-Chr8:21978404 Clacu03g0323 Clacu-Chr3:3737323 2.90E-71 dispersed
Clacu02g0093 Clacu-Chr2:997910 Clacu08g1206 Clacu-Chr8:21978404 1.20E-136 transposed
Clacu06g0278 Clacu-Chr6:3417367 Clacu08g1206 Clacu-Chr8:21978404 3.20E-134 transposed
Clacu11g1556 Clacu-Chr11:26668648 Clacu08g1206 Clacu-Chr8:21978404 5.10E-158 transposed
Clacu04g1225 Clacu-Chr4:26417156 Clacu08g1206 Clacu-Chr8:21978404 4.60E-194 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g1206 K20619 - csv:101221468 979.548