Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g1229 ATGGCTACTGAGGGCAGTCCCAGGACTGATATCTCAACAGATGGGGACACAGATGAAAAAAGCCGGAGGCCTGATAGAGGCCAACTTACTCTTACTATGGCTTCTGATTCTAGTGACAGATCCAAGGATAAAACTGATCAGAAGACTCTTCGCCGGCTAGCACAAAATCGTGAGGCTGCAAGGAAAAGCCGATTGAGAAAAAAAGCATACGTTCAACAGCTAGAGAGCAGTCGATTAAAATTGACACAACTTGAGCAGGAGCTTCAGCGAGCACGACAGCAGGGAATTTTCATATCAAGCTCAGGTGATCAGACCCATTCAATGAGTGGAAATGGGGCCATGGCATTTGATGTAGAATATGCTCGATGGCTTGAGGATCACAACCGTCAATTGAATGAATTGAGATCAGCTGTTAATTCTCATGCAAGTGACCCGGAACTGCGTATTGTTGTCGATGGCATCTTGGTTCATTATGATGAGCTCTTTAGGCTCAAGGGAAATGCAGCAAAGGCTGACGTTTTCCATTTATTATCAGGCATGTGGAAAACACCTGCAGAAAGATGTTTTCTTTGGCTCGGGGGTTTTCGTTCATCCGAGCTCCTAAAGCTTCTTGTAAATCAACTGGAGCCTCTAACAGAGCAGCAGTTGGTGGGAATAACAAACTTGCAGCAATCATCGCAGCAGGCAGAAGATGCATTATCACAAGGGATGGAGGCCTTGCAACAGTCCCTGGCAGAGACATTGTCGAGTGGAGCTCTCGGCTCCTCTGGTTCGTCAGGGAACGTTGCAAACTACATGGGTCAAATGGCCATGGCCATGGGTAAACTTGGGACCCTCGAGGGCTTTATACGCCAAGCTGACAACTTGCGACAACAGACACTTCAACAAATGCACCGTATATTGACAACTCGTCAGTCTGCTCGTGCTCTTCTTGCCATACATGACTACTTCTCCAGGCTACGAGCTCTTAGTTCGCTCTGGCTTGCTCGTCCGAGAGAGAAGTTGGATACAGAGAGAGTTCCGATGACCAAAGGGAAAACCTTAATTCTCGACGTCTCCGGTTGGCTCAGACTATTCGACGACGGATCCGTCGACCGGACCTGGACCGGACCGCCGGAGGTCAAGTTCGTCGCGGAGTCTGTGCCGCCTCATGACGAATTAATCGACGGAGTCGCGGTTCGTGATTTGGTGATTGATCAGAACTCTGGTCTTCGTGTTCGAATCTATTTACCAGAGGTGAAATGCGGCGGCGGAAAGAAACTTCCGGTTGTCGTTCATTTTCACGGCGGTGGATTTTGTATTAGCGAAGCGGATTGGTTTATGTATTATCATACTTACACTAACTTTGTGAAATCCGCCGAAGCAATATGTGTCTCTGTTTATCTCCGTCGAGCGCCAGAGCACCGTCTTCCAGCAGCGATCGACGACGGCTTCTCCGCTCTCAAGTGGTTGCAATCAGTGGCTCTCGGTAACGAAATCGAGCCTTGGATTGCCGAAAATGCGGATTTCAATCGTGTGTTCCTAATCGGAGATAGCTCTGGCGGAAATCTTGTTCACTCTGTCGCTGCCCTAGCCGGAGAAACCGATCTCACTCCGCTGAAACTTGCCGGTGGAATTCCGATTCATCCTGGTTTTGTCCGAGCAAAACGAAGCAAATCAGAGATTGAGAATCCGCAATCGCCGTTCTTGACTTTGGATATGGTAGACAAATTTCTGAGTCTCGCATTACCGGTGGGGAGTTCAAAGGATCATCCGATTACATGTCCGATGGGAATCGACGCGCCGCCGCTTGAAAAGCTAAATTTGCCACCGTTTCTACTGTGCATTGCAGAGAAGGATCTGATAATCGACACTGAAATGGAGTATTACGAAGCAATGAAGGCGGCGAATAAAGAAGTGGAGATTTTAATGAGCAAAGGAATGGGACATAGCTTCTATTTAAACAAGATCGCCATGAAAATGGACCCTGAAACAGCCGCTGAATCGGACCACCTATTTGCCGGAATTGCTCGATTTATTAAACAACATTAG 2031 47.91 MATEGSPRTDISTDGDTDEKSRRPDRGQLTLTMASDSSDRSKDKTDQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQELQRARQQGIFISSSGDQTHSMSGNGAMAFDVEYARWLEDHNRQLNELRSAVNSHASDPELRIVVDGILVHYDELFRLKGNAAKADVFHLLSGMWKTPAERCFLWLGGFRSSELLKLLVNQLEPLTEQQLVGITNLQQSSQQAEDALSQGMEALQQSLAETLSSGALGSSGSSGNVANYMGQMAMAMGKLGTLEGFIRQADNLRQQTLQQMHRILTTRQSARALLAIHDYFSRLRALSSLWLARPREKLDTERVPMTKGKTLILDVSGWLRLFDDGSVDRTWTGPPEVKFVAESVPPHDELIDGVAVRDLVIDQNSGLRVRIYLPEVKCGGGKKLPVVVHFHGGGFCISEADWFMYYHTYTNFVKSAEAICVSVYLRRAPEHRLPAAIDDGFSALKWLQSVALGNEIEPWIAENADFNRVFLIGDSSGGNLVHSVAALAGETDLTPLKLAGGIPIHPGFVRAKRSKSEIENPQSPFLTLDMVDKFLSLALPVGSSKDHPITCPMGIDAPPLEKLNLPPFLLCIAEKDLIIDTEMEYYEAMKAANKEVEILMSKGMGHSFYLNKIAMKMDPETAAESDHLFAGIARFIKQH 676
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 22184320 22195921 - ClG42_08g0122900.10 Clacu08g1229 255571
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g1229 676 Pfam Seed dormancy control 130 205 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Clacu08g1229 676 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 51 66 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Clacu08g1229 676 MobiDBLite consensus disorder prediction 11 26 - -
Clacu08g1229 676 CDD bZIP_HBP1b-like 48 100 - -
Clacu08g1229 676 Gene3D alpha/beta hydrolase 343 675 IPR029058 -
Clacu08g1229 676 Pfam alpha/beta hydrolase fold 424 646 IPR013094 GO:0016787(InterPro)
Clacu08g1229 676 Coils Coil 67 94 - -
Clacu08g1229 676 Gene3D - 47 99 - -
Clacu08g1229 676 PANTHER TRANSCRIPTION FACTOR TGA9 25 334 - -
Clacu08g1229 676 SMART brlzneu 44 107 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Clacu08g1229 676 ProSiteProfiles DOG1 domain profile. 113 330 IPR025422 GO:0006351(InterPro)|GO:0043565(InterPro)
Clacu08g1229 676 FunFam BZIP family transcription factor 47 96 - -
Clacu08g1229 676 MobiDBLite consensus disorder prediction 1 50 - -
Clacu08g1229 676 SUPERFAMILY alpha/beta-Hydrolases 348 676 IPR029058 -
Clacu08g1229 676 Pfam bZIP transcription factor 48 88 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Clacu08g1229 676 Coils Coil 124 144 - -
Clacu08g1229 676 SUPERFAMILY Leucine zipper domain 48 91 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Clacu08g1229 676 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 46 90 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g2452 Clacu-Chr2:37484262 Clacu08g1229 Clacu-Chr8:22184320 2.70E-52 dispersed
Clacu05g2894 Clacu-Chr5:36148547 Clacu08g1229 Clacu-Chr8:22184320 3.50E-142 dispersed
Clacu07g1629 Clacu-Chr7:30874429 Clacu08g1229 Clacu-Chr8:22184320 1.30E-51 dispersed
Clacu08g0661 Clacu-Chr8:15622560 Clacu08g1229 Clacu-Chr8:22184320 2.80E-118 dispersed
Clacu08g1229 Clacu-Chr8:22184320 Clacu10g1614 Clacu-Chr10:29522068 6.20E-127 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
48180 PF07859 Abhydrolase_3 1.70E-48 CL0028 Clacu TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g1229 K14431 - csv:101212972 634.409