Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu08g1393 | AAGAGTAACCCCCATGTACTAATTAATTCTACCATTGTTCTGCACTGTGCGCAACATTGCGTACTATCGGCTTTGGCGGCAGGCCTGAGAATTTTAAAACTTCATTCGAATTCCATTACTTTTTGGCGCCGAGCGAGACGCTGCCGAGATCGTAGTTGGAGTTTCGCCAAGGTTCTCTCCATTGCCCATGAATGGCGTCCGGCTCTCCTCCTTCCCTTTTATGCTTCAAAGAAAAGGAAACCTCTTACTTCCAGTCTGAAGTCTGGGAGTTACGACAAGGATGGAAAAAAGTCACTTGAAGGGTCGCCTGGTGCTAAAGGTACGTTGGACAATTACCTAGTGACCTCACAGGACCATGGCAACTCTGATATCCCATCGCATTCAGTTCGGGAAAACTTGTCTGAGCAAGACCTAGTAAAGAGAAACCTATTGTTGAAAATTAATAGCTCCTCTAGAAATGAACACGAGGAACCCACTTTGTCTAGAGGGTGTGACACTTCTGCAGCAACTGAAGGAATCAAGAAAAGAACTCTGGAGGACTCGTACGAGACCAGAAGTTCAACAGTTAAATTGATGGCAGGTGACGGGGGTGTCACACCCTGCACGGAGAAACCAGAGCTTAAACAGTTTGCAGCTGATTTCTTGTCTCTGTACTGCAGCAATGAGTTGCATACAACTGTTAGTTCGCCGGGAGAGCAAAAAGTGACTTTTCTCAAGCGGCACTCCAGTCCATCTCTACTAGAGGGGGAGGCTAAATTACCAAAGAAGATACATTCTATTGCGGGTCCATCAAATGCCAAAGGTGAACCTGATTCCTCAAATGCATTGAGTGTTGGAAACAAGCAGTCCAATTTTGTTGTTGAAACTGGGGATACTGACAGTCATCCTCCCGTTGTGCTTAAGGCATGTCTGCAGAAATGCAATAAAGCACCTAGATCACCTTATTGTTTGACTGAATGCAAAACACCAGGCTTGTCAACTGCCAATACATGTTTTCAGGAGACTCCCAAGTCTGGAAGCTCGACATTTTCCCCTGGAGAAGCTTTTTGGAAAGAAGCAATCGTGTTTGCAGATGGTTTATGCGCTCCAAGCATTGACCTTACCAATTGTGATGCTGAAGGAGCTAATGTTGCAGAGAGTCAGAGTCATACGAAGAAACTTCCTATACCAGGGGAACCTGCTCAGAAAAGGTTAAAAGGACAGTTTGGTGGAGGTAGTGGTGGAGTCCGGCTTGGGGAACCTGGTGCTTCCATGGTTTCATTGAGGAGTGAATTAAAAGAGTTAAATAGAGAAGTGTCTTCACTACCTGTTAAGCATTTTGACTTCTCGGCTGATGATAAAAACTTGGATGGAAGTACATTACCTTATTGTGCTTCAAATGAATCTGAAGTTAATGCATATGACCTTAATGAGCAGTCTGATTGTTGTTATACTAATGATAGTCTACCAAACCATAATGATAAGACCCGCGACAGTGATTCTCTTACGAAAGAGAAGATACATGAAACAAATGTAACTTCCTCTGTTCCGGTAGTGACTGAAGTGAAATTAAACATATTTAGTCCCTCTGATAGTATCACATCTGACACAGCGGTTCATGAACTTAGGGCTTCTACTGTTCATGATTTTAAAGAGGAAACAACACCTTCAAGTTCAGTAAGACATAAAGATTGGCTGGATCTAAGTTGCTGGCTGCCTCCTGAAATTTGCAGCATTTATAAAGAGAAAGGAATAACAAAACTGCATCCTTGGCAGGTCGAATGTCTTAAGGTAGACGGTGTCTTGCAGAGAAGAAATCTTGTTTATTGTGCATCTACCAGTGCTGGAAAAAGTTTTGTTGCAGAGATCTTAATGTTAAGGCGGGTGATTTCTACCGGAAAGATGGCACTTCTTGTACTTCCATATGTATCAATTTGTGCAGAAAAGGCCGCACATCTTGATGTTCTTCTTGAACCTCTGGATAAGCATGTGCGTAGTTATTATGGAAATCAAGGTGGTGGAACGCTTCCTAAGGATACTTCTGTGGCTGTTTGCACAATTGAGAAGGCAAACTCTTTGATAAACAGATTGTTGGAGGAGGGTCGTTTGTCAGAAATTGGAATTATTGTGATCGATGAATTGCACATGGTTGGAGATCAGACGAGGGGTTATCTTTTGGAACTACTTTTGACTAAACTTCGTTATGCTGCCGGTGAAGGTAATTTAGATTCTAGCAGTGGTGAGAGTTCTGGGACGAGCAGTGGTAAGTCAGACCCTGCTCATGGTATTCAAATAGTTGGCATGAGTGCAACCATGCCAAATGTGGCAGCTGTTGCAGATTGGCTTCAGGCAGCCTTGTACCAGACTGATTTTCGACCTGTTCCTTTAGAGGAGTACATTAAAGTTGGGAATACCATTTATAATAGAAGTTTGGACATTGTTAGAACAATCTCAAAAACAGCTAATCTTGGCGGTAGGGATCCAGATCACATTGTGGAATTATGTAATGAGGTAGTTGAAGAGGGTCACTCAGTATTGATCTTTTGCTCCAGTCGGAAAGGATGTGAATCAACAGCAAAACACGTGTCAAAATTCCTCAAGAAGTTTTCTGTCAAAATTCACAATGAGAACAGTGAGTTTACAGACATTTTTTCGGCAGTTGATGCACTGCGAAGATGTCCTTCTGGACTGGATCCTGTATTAGAGGAAACCTTTCCGTCTGGTGTTGCCTACCATCATGCTGGCCTTACTGTAGAGGAGAGAGAGGTTGTTGAAACTTGCTACCGCAAGGGTCTTTTGCGTGTTTTAACTGCTACATCTACCTTAGCTGCTGGAGTTAACCTGCCAGCTCGAAGGGTCATTTTCCGACAACCCAAGATTGGGCGAGACTTTATTGATGGTGCAAGGTACAGACAGATGGCTGGTCGGGCTGGCCGGACTGGGATTGATACCAAGGGGGAGAGTGTACTCATTTGCAGACCAGAAGAGATTAAAAGAATTAATGAACTTCTTAACGAGAGCTGTCCACCTTTGCAATCATGTTTGTCTGAAGATAAGAATGGAATGACTCATGCAATTTTAGAAGTTGTGGCTGGTGGGATTGTTCAAACTGCAACTGATATTCATCGATATGTAAGGTGTACTCTTTTGAATTCTACAAAACCATTTCAAGATGTGGTTAAATCAGCACAGGAATCTCTTCGGTGGTTATGCCATGGAAAATTTCTTGAGTGGAATGGGGATACCAAGTTGTATAGTACCACACCTCTTGGACGTGCATCGTTTGGAAGCTCTCTTAGTCCAGAAGAATCACTTATTGTTTTGGATGATCTTTCAAGGGCCCGAGAAGGATTTGTGCTTGCATCTGATTTACATTTGGTGTACCTAGTCACACCGATCAATGTTGATGTTGAGCCAGATTGGGAGCTATATTATGAACGGTTTATGGGTTTGCCTTCTCTTGACCAGTCTGTTGGAAATCGAGTTGGAGTTACGGAACCATTTTTAATGCGTATGGCGCATGGTGCACCGATTCGACGTGCAAATATCTCAAGAAATGGTGTCGTGGGTTTACGTACCAAGCGTGATGAACATGGGTGCATGTATGATGACAGGCCTTCAGAGGAGCAAACTATTCGAGTGTGTAAACGATTTTACGTGGCCCTCATCTTGTCAAGACTTGTTCAGGAAACTCCCATTCCTGAAGTTTGTGAAGCTTTTAAAGTTGCCAGAGGGATGGTGCAAGCATTGCAAGAGAGTGCTGGAAGGTTTGCATCTATGGTCTCCGTATTTTGCGAGAGGCTCGGATGGCACGATCTGGAAGGTTTGGTAGCCAAGTTCCAAAACCGTGTTTCATTTGGAGTTAGAGCTGAGATTGTAGAACTTACTACTATTCCATACGTTAAGGGTTCTCGAGCCAGAGCACTCTATAAAGCTGGTTTGCGGACACCTTTAGCAATTGCAGAAGCCTCTGATGCTGAATTAGTTAAAGCTCTTTTTGAGTCTGCATCATGGACTGCAGAAGAGAGTACAGCACAAAAACGGATGCATGTTGGAATAGCTAGGAAGATTAAGCATGGTGCTCGTAAAGTTGTTCTTGATAAAGCTGAAGAGGCAAGGATTGCTGCATTTTCAGCTTTTAAATCATTGGGGTTCACTGTGCCACAAATTTCTCGTCCCTTGTCAGCAAGTGCAGATGGAAATATTACAGCACAAGTGGCTGCAAGTATTCCATCTGAAATCGATACTTTAAACAGAGTTGTTAGCACACGACAAATGGAGCATGCTTTAACAAAGTCATGTTTTGGAGGAACTTCCAGTTCTGAAAAAGTAGGTGGCAAGAATCTGAGTGAAACAGGAACAATTTCTGTTGAAGTAAAACCACCCAATTTTGGCGTTAATCCTCTGGTGAATGTTGAAGGGTCTGCAATCCAGGAGTCAAATACCGTTGTTGAATGTGCGGGAAAGGTAGATGTTACAATCTCTAATCACATGGAAAGAATTGCTCAGAGGGAACAACATAGTAGTGTCTTGCATCCTCCAAAAAGAGACAGTTCTTCCATGAAAGGTCCTATCCATGCAGCTAATACATCTGGCGGATTTGAATCTTTCTTGGATTTGTGGGATGCTAGCCAGGAATTTTTTTTTGATCTCTATTACACCAAACGGTCTGAAGTGAACTCTGTTGTCCCCTTTGAATTACATGGAATAGCCATCTGTTGGGAAAATTCTCCGGTGTATTATGTGAACCTCCCAAAGGATTTGTTGGGGCCCAAGAGTGGAAAAGGTCTTTATCCGGATGACAGGACATCTGGTGACCAGGTAGATGTTTCACAATATGAACATTGGTTTGAGATGATAGAAACGAGATGGAAAAAGATCAATAAAATTTTTGCGAAGAAAAATGTTAGAAAGTTTGCATGGAATTTGAAAATTCAGGTTCAGGTACTTAAATGTCCGGGAGTTTCCATCCAGAAATTGGGCTTCCTGAATTCTGCTCGACGTAATATGGGTCTTAAACTTGTAGACGGTTCATACTTAGTGTTGTCGAGAGTTCACATAAGCAATGTAATTGATATGTGCATTGTTGCTTGGATTCTTTGGCCAGATGACGAGAGAAATTCAACCCCGAACCTGGAGAAGGAAGTCAAGAAAAGATTATCTGGTGAAGCTGCTTCTGCTGCTAACCGGAGTGGCCAGTGGAAGAATCAGATGAGAAGAGTAGCCCATAATGGTTGCTGTCGGCGTGTTGCACAGACACGAGCCCTATGTTCTGTTCTCTGGAAGCTAATAATTTCTGAAAAGCTCTTGGAAGCTCTCAACAATATAGAGATTCCATTGGTAAGTATTCTTGCTGATATGGAGACCTGGGGTATAGGTGTTGACATGGAGGGATGCATTCGGGCCCGTAATTTACTGGGAAAAAAACTCAAGTGCCTTGAGAAGGAAGCTTATAGGCTAGCTGGCATGAGCTTCTCCCTGTACGCAGCAGCAGATATTGCTAATGTTCTATATGGACATTTGAAGCTCTCTATTCCAGAGGGGTTCAACAAAGGCAAACAACATCCAAGTACTGATAAACATTGTTTGGACTTGCTGAGGAATGAACACCCTATTGTTCCAGTCATTAAAGAGCACCGGACATTGGCGAAGCTCTTTAACTGTACTTTGGGATCCATTTGCTCGTTAGCTAAGCTATCTGCAAGGACACAGAAATACACGCTACATGGTCATTGGCTCCAAACATCCACAGCAACTGGTCGGCTTTCCATGGAGGAGCCTAACCTTCAGTGCGTTGAGCATGCGGTGGATTTCAAAATGAATGAAGATGATGTTGATCATTGTAAAATTAATGCTCGTGATTTCTTCATCTCTACTCAGGAAAATTGGCTGCTCGTATCAGCAGATTATTCTCAGATAGAGTTACGGCTGATGGCACATTTTTCAAAAGACTCCTCACTGATTGAACTCCTCAGTAAACCTCATGGGGATGTGTTTACCATGATTGCTGCTAGATGGACAGGGAAGACAGAAGACTCTATTGGACCTCATGAGCGAGATCAAACCAAAAGGTTGGTATATGGAATCCTTTATGGAATGGGCGCCAAAACACTTGCATTACAGTTGGAATGTAGTAAAGATGAGGCTGTAGAGAAAATTCGAAGTTTCAAGAGTTCTTTCCCTGGCGTGGCTTCCTGGCTTCATGAGGCGGTCACATTTTGCCGTCAGAAGGGGTACGTTGAAACTCTTAAAGGAAGAAGACGCTTTTTGTCAAAAATTAATTCTCCAAATAGCAAGGAAAAATCAAAAGCACAGCGACAAGCTGTGAATTCAATTTGTCAGGGTTCAGCAGCTGACATAATTAAAGTGGCTATGATCAACATTTACTCCGTCATTGGAACGGATGCCCCAGATCCTACAGGATTACCTGCAGCTAACACTAATATATTGAGGGGCCACTGCCGAATTGTATTACAGGTGCATGATGAGTTAGTGCTAGAAGTGGACCCTTCCGTCGTCAAGGAGGCAGCAGCTTTGTTACAGAAGAGCATGGAAAATGCTGCCTCCCTTCTGGTTCCATTGCAAGTCAAACTGAAAGTTGGACGAACATGGGGTTCTTTGGAGCCCTTCTTGCATGATAGCTTCAAGATTGAAGTTCTTGTACCTGGATCTTGA | 6654 | 43.03 | KSNPHVLINSTIVLHCAQHCVLSALAAGLRILKLHSNSITFWRRARRCRDRSWSFAKVLSIAHEWRPALLLPFYASKKRKPLTSSLKSGSYDKDGKKSLEGSPGAKGTLDNYLVTSQDHGNSDIPSHSVRENLSEQDLVKRNLLLKINSSSRNEHEEPTLSRGCDTSAATEGIKKRTLEDSYETRSSTVKLMAGDGGVTPCTEKPELKQFAADFLSLYCSNELHTTVSSPGEQKVTFLKRHSSPSLLEGEAKLPKKIHSIAGPSNAKGEPDSSNALSVGNKQSNFVVETGDTDSHPPVVLKACLQKCNKAPRSPYCLTECKTPGLSTANTCFQETPKSGSSTFSPGEAFWKEAIVFADGLCAPSIDLTNCDAEGANVAESQSHTKKLPIPGEPAQKRLKGQFGGGSGGVRLGEPGASMVSLRSELKELNREVSSLPVKHFDFSADDKNLDGSTLPYCASNESEVNAYDLNEQSDCCYTNDSLPNHNDKTRDSDSLTKEKIHETNVTSSVPVVTEVKLNIFSPSDSITSDTAVHELRASTVHDFKEETTPSSSVRHKDWLDLSCWLPPEICSIYKEKGITKLHPWQVECLKVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVISTGKMALLVLPYVSICAEKAAHLDVLLEPLDKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINRLLEEGRLSEIGIIVIDELHMVGDQTRGYLLELLLTKLRYAAGEGNLDSSSGESSGTSSGKSDPAHGIQIVGMSATMPNVAAVADWLQAALYQTDFRPVPLEEYIKVGNTIYNRSLDIVRTISKTANLGGRDPDHIVELCNEVVEEGHSVLIFCSSRKGCESTAKHVSKFLKKFSVKIHNENSEFTDIFSAVDALRRCPSGLDPVLEETFPSGVAYHHAGLTVEEREVVETCYRKGLLRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGARYRQMAGRAGRTGIDTKGESVLICRPEEIKRINELLNESCPPLQSCLSEDKNGMTHAILEVVAGGIVQTATDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHGKFLEWNGDTKLYSTTPLGRASFGSSLSPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVEPDWELYYERFMGLPSLDQSVGNRVGVTEPFLMRMAHGAPIRRANISRNGVVGLRTKRDEHGCMYDDRPSEEQTIRVCKRFYVALILSRLVQETPIPEVCEAFKVARGMVQALQESAGRFASMVSVFCERLGWHDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTPLAIAEASDAELVKALFESASWTAEESTAQKRMHVGIARKIKHGARKVVLDKAEEARIAAFSAFKSLGFTVPQISRPLSASADGNITAQVAASIPSEIDTLNRVVSTRQMEHALTKSCFGGTSSSEKVGGKNLSETGTISVEVKPPNFGVNPLVNVEGSAIQESNTVVECAGKVDVTISNHMERIAQREQHSSVLHPPKRDSSSMKGPIHAANTSGGFESFLDLWDASQEFFFDLYYTKRSEVNSVVPFELHGIAICWENSPVYYVNLPKDLLGPKSGKGLYPDDRTSGDQVDVSQYEHWFEMIETRWKKINKIFAKKNVRKFAWNLKIQVQVLKCPGVSIQKLGFLNSARRNMGLKLVDGSYLVLSRVHISNVIDMCIVAWILWPDDERNSTPNLEKEVKKRLSGEAASAANRSGQWKNQMRRVAHNGCCRRVAQTRALCSVLWKLIISEKLLEALNNIEIPLVSILADMETWGIGVDMEGCIRARNLLGKKLKCLEKEAYRLAGMSFSLYAAADIANVLYGHLKLSIPEGFNKGKQHPSTDKHCLDLLRNEHPIVPVIKEHRTLAKLFNCTLGSICSLAKLSARTQKYTLHGHWLQTSTATGRLSMEEPNLQCVEHAVDFKMNEDDVDHCKINARDFFISTQENWLLVSADYSQIELRLMAHFSKDSSLIELLSKPHGDVFTMIAARWTGKTEDSIGPHERDQTKRLVYGILYGMGAKTLALQLECSKDEAVEKIRSFKSSFPGVASWLHEAVTFCRQKGYVETLKGRRRFLSKINSPNSKEKSKAQRQAVNSICQGSAADIIKVAMINIYSVIGTDAPDPTGLPAANTNILRGHCRIVLQVHDELVLEVDPSVVKEAAALLQKSMENAASLLVPLQVKLKVGRTWGSLEPFLHDSFKIEVLVPGS | 2217 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 24023174 | 24038927 | - | ClG42_08g0139300.10 | Clacu08g1393 | 255735 |
Annotation
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu08g1393 | 2217 | Gene3D | Taq DNA Polymerase; Chain T, domain 4 | 1784 | 1896 | - | - | |
| Clacu08g1393 | 2217 | Pfam | DNA polymerase family A | 1795 | 2198 | IPR001098 | GO:0003677(InterPro)|GO:0003887(InterPro)|GO:0006260(InterPro) | |
| Clacu08g1393 | 2217 | Gene3D | - | 1966 | 2110 | - | - | |
| Clacu08g1393 | 2217 | MobiDBLite | consensus disorder prediction | 149 | 183 | - | - | |
| Clacu08g1393 | 2217 | SMART | ultradead3 | 577 | 792 | IPR014001 | - | |
| Clacu08g1393 | 2217 | FunFam | Helicase and polymerase-containing protein TEBICHI | 565 | 786 | - | - | |
| Clacu08g1393 | 2217 | MobiDBLite | consensus disorder prediction | 83 | 132 | - | - | |
| Clacu08g1393 | 2217 | CDD | DNA_pol_A_theta | 1784 | 2200 | - | - | |
| Clacu08g1393 | 2217 | SMART | helicmild6 | 892 | 974 | IPR001650 | - | |
| Clacu08g1393 | 2217 | MobiDBLite | consensus disorder prediction | 109 | 132 | - | - | |
| Clacu08g1393 | 2217 | PANTHER | DNA POLYMERASE I | 578 | 2205 | IPR002298 | GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006261(InterPro)|GO:0006302(PANTHER) | |
| Clacu08g1393 | 2217 | SUPERFAMILY | DNA/RNA polymerases | 1762 | 2200 | IPR043502 | - | |
| Clacu08g1393 | 2217 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 594 | 988 | IPR027417 | - | |
| Clacu08g1393 | 2217 | Gene3D | - | 1910 | 2197 | - | - | |
| Clacu08g1393 | 2217 | Gene3D | - | 1519 | 1781 | IPR036397 | GO:0003676(InterPro) | |
| Clacu08g1393 | 2217 | Pfam | DNA_pol_Q helicase like region helical domain | 1094 | 1277 | IPR048960 | - | |
| Clacu08g1393 | 2217 | Gene3D | - | 565 | 786 | IPR027417 | - | |
| Clacu08g1393 | 2217 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 591 | 783 | IPR014001 | - | |
| Clacu08g1393 | 2217 | MobiDBLite | consensus disorder prediction | 1497 | 1517 | - | - | |
| Clacu08g1393 | 2217 | FunFam | DNA polymerase I | 1966 | 2110 | - | - | |
| Clacu08g1393 | 2217 | MobiDBLite | consensus disorder prediction | 735 | 752 | - | - | |
| Clacu08g1393 | 2217 | Gene3D | - | 797 | 995 | IPR027417 | - | |
| Clacu08g1393 | 2217 | MobiDBLite | consensus disorder prediction | 734 | 753 | - | - | |
| Clacu08g1393 | 2217 | FunFam | Helicase and polymerase-containing protein TEBICHI | 797 | 994 | - | - | |
| Clacu08g1393 | 2217 | FunFam | Helicase and polymerase-containing protein TEBICHI | 1162 | 1304 | - | - | |
| Clacu08g1393 | 2217 | Pfam | Helicase conserved C-terminal domain | 899 | 974 | IPR001650 | - | |
| Clacu08g1393 | 2217 | Pfam | Helix-turn-helix domain | 979 | 1069 | IPR046931 | - | |
| Clacu08g1393 | 2217 | SUPERFAMILY | Sec63 N-terminal domain-like | 1194 | 1320 | - | - | |
| Clacu08g1393 | 2217 | CDD | SF2_C_Ski2 | 785 | 986 | - | - | |
| Clacu08g1393 | 2217 | CDD | DEXHc_POLQ-like | 565 | 786 | - | - | |
| Clacu08g1393 | 2217 | Gene3D | - | 1169 | 1304 | - | - | |
| Clacu08g1393 | 2217 | Pfam | DEAD/DEAH box helicase | 594 | 769 | IPR011545 | GO:0003676(InterPro)|GO:0005524(InterPro) | |
| Clacu08g1393 | 2217 | PRINTS | DNA-polymerase family A (pol I) signature | 2012 | 2037 | IPR002298 | GO:0003887(InterPro)|GO:0006261(InterPro) | |
| Clacu08g1393 | 2217 | PRINTS | DNA-polymerase family A (pol I) signature | 2049 | 2060 | IPR002298 | GO:0003887(InterPro)|GO:0006261(InterPro) | |
| Clacu08g1393 | 2217 | PRINTS | DNA-polymerase family A (pol I) signature | 1901 | 1923 | IPR002298 | GO:0003887(InterPro)|GO:0006261(InterPro) | |
| Clacu08g1393 | 2217 | PRINTS | DNA-polymerase family A (pol I) signature | 2103 | 2119 | IPR002298 | GO:0003887(InterPro)|GO:0006261(InterPro) | |
| Clacu08g1393 | 2217 | PRINTS | DNA-polymerase family A (pol I) signature | 1957 | 1980 | IPR002298 | GO:0003887(InterPro)|GO:0006261(InterPro) | |
| Clacu08g1393 | 2217 | PRINTS | DNA-polymerase family A (pol I) signature | 2071 | 2082 | IPR002298 | GO:0003887(InterPro)|GO:0006261(InterPro) | |
| Clacu08g1393 | 2217 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 823 | 1015 | IPR001650 | - | |
| Clacu08g1393 | 2217 | SMART | polaultra3 | 1942 | 2165 | IPR001098 | GO:0003677(InterPro)|GO:0003887(InterPro)|GO:0006260(InterPro) | |
| Clacu08g1393 | 2217 | FunFam | Helicase and polymerase-containing protein TEBICHI | 1784 | 1896 | - | - |
Pathway
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu08g1393 | K02349 | - | - | csv:101215433 | 3825.4 |
Dupl-types
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu08g1393 | Clacu-Chr8:24023174 | Clacu09g1958 | Clacu-Chr9:34468065 | 9.10E-26 | dispersed |
Deco-Alignment
| Select | Vvi1 | Blo1 | Blo2 | Bda1 | Bda2 | Bpe1 | Bpe2 | Bma1 | Bma2 | Cmo1 | Cmo2 | Cma1 | Cma2 | Car1 | Car2 | Sed1 | Cpe1 | Cpe2 | Bhi1 | Tan1 | Cmetu1 | Lac1 | Hepe1 | Mch1 | Lcy1 | Cla1 | Cam1 | Cec1 | Cco1 | Clacu1 | Cmu1 | Cre1 | Cone1 | Cone2 | Cone3 | Cone4 | Lsi1 | Csa1 | Chy1 | Cme1 | Blo3 | Blo4 | Bda3 | Bda4 | Bpe3 | Bpe4 | Bma3 | Bma4 | Sed2 | Cmo3 | Cmo4 | Cma3 | Cma4 | Car3 | Car4 | Cpe3 | Cpe4 | Bhi2 | Tan2 | Cmetu2 | Lac2 | Hepe2 | Mch2 | Lcy2 | Cla2 | Cam2 | Cec2 | Cco2 | Clacu2 | Cmu2 | Cre2 | Lsi2 | Csa2 | Chy2 | Cme2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Vvi4g343 | . | . | . | . | Bpe02g01197 | . | . | . | Cmo05g00632 | . | . | Cma05g00730 | . | . | . | . | . | Bhi04g00821 | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | Cone17ag1106 | . | . | . | . | Cme03g01725 | . | Blo18g00068 | . | . | . | . | Bma01g01331 | . | . | . | . | . | . | . | Car05g00549 | Cpe11g00651 | . | . | . | . | . | . | . | . | Cla08g01238 | Cam08g1696 | Cec08g1275 | Cco08g1396 | Clacu08g1393 | . | Cre08g1178 | Lsi08g01101 | . | Chy03g01230 | . |
Syn-Orthogroups
| Select | Orthogroup | Bda | Bhi | Blo | Bma | Bpe | Cam | Car | Cco | Cec | Chy | Cla | Clacu | Cma | Cme | Cmetu | Cmo | Cmu | Cone | Cpe | Cre | Csa | HCH | Hepe | Lac | Lcy | Lsi | Mch | Sed | Tan | Vvi | Total |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| OG0007306 | 0 | 5 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 2 | 1 | 1 | 1 | 1 | 2 | 1 | 35 |