Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu08g1464 | ATGTACGAGTTCCAGGTCCCACATTTAGCAATCCTGGTTCCGGTCTTCACTAAACCCCGAGCCAAGCGCTGGAAGATCTGTCCTCCACCGCACCCTCTCTCTCACGAGAGGAAACGGAACCCTTTATCATCTCTCTGCCATATTCATCGGCCTCGAGTGATGGGGGCTCCGTTCGAGGGAATAGTAAAGGATTTGAAGGGAAGGGCGGCGTGCTATAAACAGGATTGGATAAGTGCACTATGTTCTGGCGTCAGGATTTTGGCTCCTACTATGTACATTTTCTTCGCCTCAGCTCTACCTGTTATTGCCTTTGGGGAGCAACTTAGTAGGGATACAGGTGGAAGATTGAGCACCGTGGAAACATTAGCCTCAACTGCGCTGTGTGGAATTATCCACTCAATCTTTGGGGGACAGCCTTTGTTGATTTTAGGAGTGGCAGAACCAACTGTTATAATGTACATTTACTTGTACAGTTTCTCCCAAGGCCGGCCAGAGTTAGGAGGCGATCTCTTTTTAGCTTGGGCTGGATGGGTGTGCATTTGGACAGGATTCTTCCTGATCCTCCTTGCAATCTTTAATGCTTGCACCGTCATCACCAAATTTACCAGAGTTGCGGGGGAATTATTTGGCATGCTTATTGCTGTTCTTTTCTTCCAAGAGGCAATAAAGGGATTGATAAGCGAATTCCAGATTCCCAAGTCAGAAAAGCCAGAGGTATTGGAGTACCAATTTGAGTGGTTGTATGCAAATGGGTTGCTTGCGGTAATTTTTTCAATGGGTCTACTCTTCACAGCCTTGAAAAGCAGACATGCAAGATCGTGGAAATATGGAACTGGCTGGTTCCGGAGTTTCATTGCGGACTATGGGGTTCCACTTATGGTTGTGTTCTGGACAGCATTGTCGTATGGAGTTCCCGGTGAAGTTCCAAATGGAGTTCCAAGGAGACTCTTTTGCCCATTACCTTGGGAACCAGCCTCATTGTACCACTGGACTGTAGTGAAGGACATGGGTAAGGTTCCATTGACTTACATCTTTGCTGCAACTCTGCCAGCCGTCATGATAGCAGGCCTATACTTTTTTGACCATAGTGTTGCATCGCAAATGGCGCAACAGAAAGAGTTTAATCTTCAAAATCCATCTGCATATCATTATGATGTCTTCTTGCTCGGGATTATGACTGTGATTTGTGGATTGCTTGGATTGCCTCCTTCTAATGGTGTCCTCCCACAGTCCCCAATGCACACCAAGAGTCTTGCAGTGCTTAAACGGCAGCTAATTCGAAGAAAAATGGTAAAGAGTGCAAAGGAATGTATCAAACAAAAAGCAAGCAACTCTGAAATTTATGGAAAGATGCAGGCTGTGTTCATTGAAATGGACGCATCTCCAACTCCTAAAGAGCTAGAAACCTTGACGAAGGCAGTAATGAATGCTGATGAAGGTGATCGAAAGGGAAAATTCGATGCTGAGAAAAATATAGATCCTTATTTGCCTGTTCGTGTGAATGAGCAAAGGATGAGCAACTTGCTGCAGTCTTTCCTTGTTGCTGTATTAATATTTGCTATCCCTATAATGAGAATGATACCTACTTCAGTTCTTTGGGGATACTTTGCTTACATGGCTGTTGATAGTCTCCCAGGAAATCAGTTCTGGGAAAGGATGTTGTTACTCTTCATTACACCCGGTCGGCGTTTCAAAGTCTTGGAGGGGTCTCATTTATCTTTCGTTGAATCTGTGCCATTCAAGATCATTGCTACGTTTACCCTCCTCCAGTTTGCATATTTCCTGTTGTGCTTTGGTGTAACATGGATACCTGTAGCTGGGATCCTGTTCCCACTGCCATTTTTCCTCCTCATTAGCATAAGAGAGCATGTGCTCCCCAAGTTCTTCCAGCATAGCCATCTTCAAGAGCTAGATGCTTCAGAGTATGAGGAGATTGCTGGTGCCGGACATCGCGCCATTAATCTCACAGCACCAGAAAAGGAGCCACCTGATTCAATTGCGGAAGAGAGTAACGAAGAATACTATGATGCCGAGATATTAGATGAGATGACAACTCATAGAGGAGAATTAAAGCTTAGAACTTCAAACCAATACACCCATCCGACCGAAGGGTCGCCGCCGAGAGCGACGGCGTGGCCGGAGTACTTCAGGTCCGCCGCCGCCATCTCCGAGAGCAAGTTGAATCTGGGAATTGACAGTGCATGCGAAAAATAA | 2214 | 45.66 | MYEFQVPHLAILVPVFTKPRAKRWKICPPPHPLSHERKRNPLSSLCHIHRPRVMGAPFEGIVKDLKGRAACYKQDWISALCSGVRILAPTMYIFFASALPVIAFGEQLSRDTGGRLSTVETLASTALCGIIHSIFGGQPLLILGVAEPTVIMYIYLYSFSQGRPELGGDLFLAWAGWVCIWTGFFLILLAIFNACTVITKFTRVAGELFGMLIAVLFFQEAIKGLISEFQIPKSEKPEVLEYQFEWLYANGLLAVIFSMGLLFTALKSRHARSWKYGTGWFRSFIADYGVPLMVVFWTALSYGVPGEVPNGVPRRLFCPLPWEPASLYHWTVVKDMGKVPLTYIFAATLPAVMIAGLYFFDHSVASQMAQQKEFNLQNPSAYHYDVFLLGIMTVICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRRKMVKSAKECIKQKASNSEIYGKMQAVFIEMDASPTPKELETLTKAVMNADEGDRKGKFDAEKNIDPYLPVRVNEQRMSNLLQSFLVAVLIFAIPIMRMIPTSVLWGYFAYMAVDSLPGNQFWERMLLLFITPGRRFKVLEGSHLSFVESVPFKIIATFTLLQFAYFLLCFGVTWIPVAGILFPLPFFLLISIREHVLPKFFQHSHLQELDASEYEEIAGAGHRAINLTAPEKEPPDSIAEESNEEYYDAEILDEMTTHRGELKLRTSNQYTHPTEGSPPRATAWPEYFRSAAAISESKLNLGIDSACEK | 737 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
8 | 24652074 | 24661028 | + | ClG42_08g0146400.10 | Clacu08g1464 | 255806 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu08g1464 | 737 | MobiDBLite | consensus disorder prediction | 690 | 704 | - | - | |
Clacu08g1464 | 737 | Gene3D | Helical hairpin bin | 68 | 110 | - | - | |
Clacu08g1464 | 737 | FunFam | probable boron transporter 2 | 68 | 110 | - | - | |
Clacu08g1464 | 737 | MobiDBLite | consensus disorder prediction | 690 | 710 | - | - | |
Clacu08g1464 | 737 | Pfam | HCO3- transporter integral membrane domain | 250 | 424 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Clacu08g1464 | 737 | Pfam | HCO3- transporter integral membrane domain | 498 | 640 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Clacu08g1464 | 737 | Pfam | HCO3- transporter integral membrane domain | 57 | 235 | IPR011531 | GO:0006820(InterPro)|GO:0016020(InterPro) | |
Clacu08g1464 | 737 | PANTHER | ANION EXCHANGE PROTEIN | 28 | 687 | IPR003020 | GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu01g0519 | Clacu-Chr1:5091489 | Clacu08g1464 | Clacu-Chr8:24652074 | 3.30E-261 | dispersed | |
Clacu04g0292 | Clacu-Chr4:9599832 | Clacu08g1464 | Clacu-Chr8:24652074 | 3.70E-07 | dispersed | |
Clacu08g1464 | Clacu-Chr8:24652074 | Clacu10g1172 | Clacu-Chr10:24365206 | 1.00E-215 | dispersed | |
Clacu07g1288 | Clacu-Chr7:27678743 | Clacu08g1464 | Clacu-Chr8:24652074 | 2.50E-269 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu08g1464 | K24194 | - | csv:101220188 | 1213.75 |