Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g1704 ATGTCGACAACCTCCATTACTATCCCTTCTCTTCAACCCCACTTGCGATTTCCCTCCCAAGAAAAGTCTCACAGATCTCGTTCTAGAGTTGGGTTCGTTTCCCTACGCCCAATCTACGCCGCCGACAGGGTTTCCTCCTCGTCTCCCTCGCCTGTTCAAGTGCCGCAGCGGACTGTTTCGCCGCCGGAACCCACGAAGCTTCCTTTGAGGAAGATTCCAGGTGACTATGGGCCGCCGATGTTTGGGGCGTTGAAGGACCGACAAGATTATTTCTACAATCAGGGGAGAGAAGAGTATCTGAAATCTCGAATGCTACGATATGAATCCACTGTTTATAGAACCAATATGCCACCGGGTCCATTTATCACTTCTGATTCTCGAGTTGTTGTTTTACTCGACGGGAAGAGTTTTCCTGTTCTTTTCGACAATTCTAAAGTTGAGAAGAAGGATCTCTTTACCGGGACTTACATGCCTTCAACAGAGCTCACAGGCGGTTACAGGGTTCTCTCTTATATTGACCCATCTGAGCCCAATCACGAGAAGCTTAAACAGCTGATCTTCTTCCTCCTCAAGCACCGTCGGGACAAAATTATGCCCGAATTTCACTCTACTTTTTCCGAGCTATTCGAGACTCTGGAGAAGGATTTGGCTGCTGCTGGTAAAGCCGAGTACAATGCTTCCGGTGAACAGGCGGCGTTTAATTTCTTGGCTCGGTCTCTTTTCGGCGCCAATCCGGTCGATACAAAATTGGGTCGGGACGCTCCGAAATTGATTGCGAAATGGGTTTTGTTCCAGCTTGGCCCTGTTCTCAGTCTCGGCCTCCCCAAGGTTGTCGAGGAGCTTCTCCTCCGCACGTTCCGGCTCCCGCCGGCGCTGATCAAAGCCGATTACCGGCGGCTGTACGACTTCTTTTACCAATCGTCGGAGGCGGTGTTTGAGGAAGCAGATAGATTGGGGATTTCGAGGGAAGAAGCTTGCCACAACTTGCTATTTACAACTTGTTTTAATTCATTCGGAGGGATGAAGATCTTCTTCCCCAATATGATCAAATGGATCGGCCGAGCCGGAGTGAATCTCCACACCCAACTCGCACGGGAGATTCGCACTGCGGTAAAAGCCAACGGTGGGAAAATCACGATGAGGGCTATGGAACAGATGCCGCTGATGAAATCAGTGGTGTATGAAGCGTTCAGAATCGAGCCGCCGGTTCCGGTTCAGTACGGTCGGGCGAAGAAAGACCTTGTGGTCGAAAGCCACGACGCGGCTTTCGAGATCAAAGAAGGGGAAGTGATTTGTGGGTATCAGCCATTCGCTACCAGAGATCCGAAAATCTTCGACAGAGCCGATGAGTTCGTGCCTGATCGGTTCACCGGCGACGGCGAAGAGTTGCTGAAACACGTGCTATGGTCAAACGGACCGGAGACTCAATCGCCGACGGTTCAGAACAAACAGTGCGCCGGAAAAGACTTCATCGTCTTCATCTCTCGCCTTCTCGTCGTGGAACTGTTCCTCCGGTACGACTCGTTCGACATCGAAGCCGCAAACACTCCGTTAGGCGCTGCCGTCACTGTAACTTCCCTAAAGAAAGCAAGTTTCTGA 1599 51.03 MSTTSITIPSLQPHLRFPSQEKSHRSRSRVGFVSLRPIYAADRVSSSSPSPVQVPQRTVSPPEPTKLPLRKIPGDYGPPMFGALKDRQDYFYNQGREEYLKSRMLRYESTVYRTNMPPGPFITSDSRVVVLLDGKSFPVLFDNSKVEKKDLFTGTYMPSTELTGGYRVLSYIDPSEPNHEKLKQLIFFLLKHRRDKIMPEFHSTFSELFETLEKDLAAAGKAEYNASGEQAAFNFLARSLFGANPVDTKLGRDAPKLIAKWVLFQLGPVLSLGLPKVVEELLLRTFRLPPALIKADYRRLYDFFYQSSEAVFEEADRLGISREEACHNLLFTTCFNSFGGMKIFFPNMIKWIGRAGVNLHTQLAREIRTAVKANGGKITMRAMEQMPLMKSVVYEAFRIEPPVPVQYGRAKKDLVVESHDAAFEIKEGEVICGYQPFATRDPKIFDRADEFVPDRFTGDGEELLKHVLWSNGPETQSPTVQNKQCAGKDFIVFISRLLVVELFLRYDSFDIEAANTPLGAAVTVTSLKKASF 532
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 26607930 26609528 + ClG42_08g0170400.10 Clacu08g1704 256046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g1704 532 FunFam Allene oxide synthase, chloroplastic 67 532 - -
Clacu08g1704 532 Gene3D Cytochrome P450 63 532 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1704 532 SUPERFAMILY Cytochrome P450 67 507 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1704 532 MobiDBLite consensus disorder prediction 1 17 - -
Clacu08g1704 532 MobiDBLite consensus disorder prediction 44 72 - -
Clacu08g1704 532 MobiDBLite consensus disorder prediction 1 28 - -
Clacu08g1704 532 PRINTS E-class P450 group IV signature 386 402 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1704 532 PRINTS E-class P450 group IV signature 485 503 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1704 532 PRINTS E-class P450 group IV signature 439 457 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1704 532 Pfam Cytochrome P450 361 459 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu08g1704 532 CDD CYP74 101 525 - -
Clacu08g1704 532 PANTHER CYTOCHROME P450 26 71 506 - GO:0009535(PANTHER)|GO:0009695(PANTHER)|GO:0009941(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu02g0215 Clacu-Chr2:2049262 Clacu08g1704 Clacu-Chr8:26607930 2.40E-104 dispersed
Clacu02g0584 Clacu-Chr2:5642251 Clacu08g1704 Clacu-Chr8:26607930 1.90E-146 dispersed
Clacu02g0583 Clacu-Chr2:5633518 Clacu08g1704 Clacu-Chr8:26607930 3.20E-149 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g1704 K01723 - csv:101221732 987.638