Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu08g1754 | ATGGGTTGGCCTCTAATTGGCGAGACCTTTCATTTTTATTCTCAAGATCCAACCTCCTTCTTTCTTGGAAAACAAAAAAGATATGGGGAGATATTCAAGACCCACATTCATGGATGTCCGTGTGTGATGTTAGCGACTCCCGAGGCGGCTCGGTTCGTGCTAGTGACACAGGCTCATCTCTTCAAACCTACATATCCACAAAGTAAAGAGCGATTAATTGGGCCATCGGCTCTGTTTTTCCACCAAAGTGAAACCCATTTGCGTTTGCGTAAGCTAATCCAAAGCTCTCTGTCACCGGACCCTGTTCGAGCCTTAGTCCCTGACATCCACGCCCTAGCCATCTCTGCATTGCCCTCATGGCTCAATGGCCATCTCATTAACACTTTCCATCAAATGAAGAAGTTCTCTTTTGAAGTGGGGATTTTGGCAATTTTCGGGCATTTGGAAGACACCAATTACAGAGAGGAACTAATGAAAAACTATTCCATAGTGAACAAAGGCTATAATTCTTTCCCCACCAACATTCCCGGAACGCTTTACAAAAAAGCACTTAAAGCAAGAAAGAGGCTGGGAGAGATCATAAGCTGTATAATCTCAGAGAAAAGGGAGAAAAGAAAAGAATTAGGGGAGAAGAATCTATTAGCGTGTTTGCTAAAATGGAGAGATGAAAATGGAGAAACTTTAAGTGATGAACAGATCGCCGACAACATCATCGGAGTTCTGTTTGCTGCTCAGGACACGACGGCCAGTGTTCTCACTTGGGTTGTTAAATATCTACATGATAACCACAAAGTTCTAGAAGCTGTCAAGGTGGAACAAAAGGCAATTGAAGAAGGCATTAATGAAGGGAGCCGACCAATGAGCTGGGCTCAGACACGAAACATGCCCTTTACCAACAAGGTGGTGTTGGAGAGCTTGAGAATGGCGAGTATTATATCATTCACTTTTAGAGAAGCTGTGGCAGATGTTGAATATAAAGGATATTTAATTCCAAAGGGTTGGAAAGTAATGCCTTTGTTCAGGAATATTCACCACAATCCTGACTACTTTGTTGACCCTCATAAATTTGATCCTTCAAGATTTGAGGTTGCTCCAAGACCCAATACGTTCATGCCATTTGGCAGTGGGGTCCATGCCTGCCCAGGAAATGACCTTGCCAAGCTTGAAATCTTGATCATGATCCACCATCTAGTCACCAAATTCAGGTGGGAATTGGCAGGACAGAGAGATGGGATTCTGCATGGGCCTTTTCCAGTGCCTATGAATGGGCTTCCCATTAGAGTCTGGAGATTATCCACTTGA | 1302 | 43.7 | MGWPLIGETFHFYSQDPTSFFLGKQKRYGEIFKTHIHGCPCVMLATPEAARFVLVTQAHLFKPTYPQSKERLIGPSALFFHQSETHLRLRKLIQSSLSPDPVRALVPDIHALAISALPSWLNGHLINTFHQMKKFSFEVGILAIFGHLEDTNYREELMKNYSIVNKGYNSFPTNIPGTLYKKALKARKRLGEIISCIISEKREKRKELGEKNLLACLLKWRDENGETLSDEQIADNIIGVLFAAQDTTASVLTWVVKYLHDNHKVLEAVKVEQKAIEEGINEGSRPMSWAQTRNMPFTNKVVLESLRMASIISFTFREAVADVEYKGYLIPKGWKVMPLFRNIHHNPDYFVDPHKFDPSRFEVAPRPNTFMPFGSGVHACPGNDLAKLEILIMIHHLVTKFRWELAGQRDGILHGPFPVPMNGLPIRVWRLST | 433 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 8 | 26951111 | 26955459 | - | ClG42_08g0175400.10 | Clacu08g1754 | 256096 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu08g1754 | 433 | Pfam | Cytochrome P450 | 3 | 409 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | P450 superfamily signature | 243 | 260 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | P450 superfamily signature | 300 | 311 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | P450 superfamily signature | 371 | 380 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | P450 superfamily signature | 380 | 391 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | Gene3D | Cytochrome P450 | 1 | 431 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | FunFam | Abscisic acid 8 | 1 | 430 | - | - | |
| Clacu08g1754 | 433 | PRINTS | E-class P450 group I signature | 339 | 363 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | E-class P450 group I signature | 299 | 317 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | E-class P450 group I signature | 370 | 380 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | E-class P450 group I signature | 25 | 44 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | E-class P450 group I signature | 380 | 403 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PRINTS | E-class P450 group I signature | 232 | 249 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu08g1754 | 433 | PANTHER | CYTOCHROME P450 26 | 1 | 407 | - | GO:0004497(PANTHER)|GO:0010295(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER) | |
| Clacu08g1754 | 433 | CDD | CYP90-like | 25 | 428 | - | - | |
| Clacu08g1754 | 433 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 373 | 382 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu08g1754 | 433 | SUPERFAMILY | Cytochrome P450 | 2 | 429 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu07g1111 | Clacu-Chr7:25750565 | Clacu08g1754 | Clacu-Chr8:26951111 | 8.00E-150 | dispersed | |
| Clacu08g1754 | Clacu-Chr8:26951111 | Clacu09g0966 | Clacu-Chr9:9067824 | 6.50E-77 | dispersed | |
| Clacu03g1172 | Clacu-Chr3:22818023 | Clacu08g1754 | Clacu-Chr8:26951111 | 1.00E-62 | transposed | |
| Clacu02g0632 | Clacu-Chr2:6219695 | Clacu08g1754 | Clacu-Chr8:26951111 | 5.30E-171 | wgd | |
| Clacu05g2182 | Clacu-Chr5:30441181 | Clacu08g1754 | Clacu-Chr8:26951111 | 1.50E-183 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu08g1754 | K09843 | - | vvi:100245540 | 667.537 |