Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu08g1859 ATGTTCTTCATTGAGGATTTGTGGCAGATGCTCTTCGTTCGAGGTTTTCAGGATACAACTCGACTTCTCTCTGAGTCTTTTATACGGACGATATCCGAATCCATGGCCAATTCATCTTGTGGGGTCTCGGAATTAGAACTCTGTAGGAATGATACGGCTGCGCTCCATTTCAAATTAGTCGCCATCGCCTCGATTCTAACATCGGGAGTCATCGGAATCGCCATTCCGTTGTTTGGTAGACAGAGTCGGTTCCTCAAAACAGACGGCAACCTGTTTGTGGCGGCGAAGGCGTTTGCCGCCGGTGTGATTCTAGCCACCGCCTTCGTCCATATGCTTCCGGATGGATCGAAGGCCCTCTCCGATCCGTGCTTGCCGGAATTTCCTTGGTCTAAATTCCCCTTCTCTGGATTCTTCGCGATGATGGCGTCGCTGTTGACGCTCCTCGTCGATTTCGTCGGAACTCAGTACTACGAGCGGAAACAGGGGATGATTCGGTCGAAAGAGGAGGCGAATCGGGTCGGGTCGATTATGGATTCGGGGTTGGAATCCGGCATTGTTCCGGCCGGAGATTTGAACGTGAAAGTGTTTGGGGAAGAGGACGGCGGCGCGATGCACATTGTCGGAATGCATGCCCACGCCGCCCACCACCGGCACAGTCATCCACAGGGGAAGCAGGCATGTGATGGGCACGTGACGGGTCATGATCATGGGCATGGGCACGGGCATGCCCATGGACATGTTCATTCTCATGGGCTGGACGGCGACGATGACGAAAGCGGTGTACGACATGTCGTTGTTTCCCAGATTTTGGAGCTTGGAATAGTGTCACATTCAGTCATAATTGGGCTATCTCTTGGAGTGTCCCACAGCCCATGCACCATTAGACCCTTAATTGCAGCTCTCTCCTTCCATCAGTTCTTTGAAGGCTTTGCCCTTGGTGGCTGCATTTCTCAGGCTCAATTCAACACCCTCTCCACCTCCCTCATGGCTGTCTTCTTCGCCATCACCACACCCCTCGGCATCTCCATAGGCGCTGCCATTGCCTCCACTTACAACCCCAACAGCACCGGGGCATTGGTTGCTGAAGGCATTTTGGACTCTCTATCGGCTGGAATTTTGGTGTACATGGCTCTGGTTGATTTGATTGCAGCCGACTTTCTTAGCAAAAGAATGAGCTGCAATTTTAGACTCCAAATTGTTTCGTATTGTACTCTCTTCCTCGGCGCGGGGTTGATGTCTTCGCTTGCGCTTTGGGCTTGA 1260 52.38 MFFIEDLWQMLFVRGFQDTTRLLSESFIRTISESMANSSCGVSELELCRNDTAALHFKLVAIASILTSGVIGIAIPLFGRQSRFLKTDGNLFVAAKAFAAGVILATAFVHMLPDGSKALSDPCLPEFPWSKFPFSGFFAMMASLLTLLVDFVGTQYYERKQGMIRSKEEANRVGSIMDSGLESGIVPAGDLNVKVFGEEDGGAMHIVGMHAHAAHHRHSHPQGKQACDGHVTGHDHGHGHGHAHGHVHSHGLDGDDDESGVRHVVVSQILELGIVSHSVIIGLSLGVSHSPCTIRPLIAALSFHQFFEGFALGGCISQAQFNTLSTSLMAVFFAITTPLGISIGAAIASTYNPNSTGALVAEGILDSLSAGILVYMALVDLIAADFLSKRMSCNFRLQIVSYCTLFLGAGLMSSLALWA 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
8 27893969 27896810 - ClG42_08g0185900.10 Clacu08g1859 256201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu08g1859 419 PANTHER ZINC/IRON TRANSPORTER 52 418 - GO:0005385(PANTHER)|GO:0005886(PANTHER)|GO:0016020(PANTHER)|GO:0071577(PANTHER)
Clacu08g1859 419 Pfam ZIP Zinc transporter 56 416 IPR003689 GO:0016020(InterPro)|GO:0030001(InterPro)|GO:0046873(InterPro)|GO:0055085(InterPro)
Clacu08g1859 419 NCBIfam ZIP zinc/iron transport family 40 419 IPR004698 GO:0005385(InterPro)|GO:0016020(InterPro)|GO:0071577(InterPro)
Clacu08g1859 419 MobiDBLite consensus disorder prediction 235 254 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu08g1859 Clacu-Chr8:27893969 Clacu11g1868 Clacu-Chr11:29811139 7.20E-73 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu08g1859 K14709 - csv:101218224 747.658