Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0029 ATGGGAAATTGTTTGCTCTTAATTCATCCAAGGTTTGACTGCCTCTTCTCTGTTCTCTCTTGTTCTGGAATAATTTTTTTTACTGAATTCCAATGTATTGAACTTGAACCCAGCAGTTTGGTACAGCACCAGTTCGCTGTCACTTTCATGGGGCTGATTCCGCAGTCAGGATACCAGGGTGTAGTCTCGCATTGTGTTAGGAAGCATTTTTGTTACAGCCATAATTCGAGGAAGTCATCAAAAAGGGGGATGGCATTTAGAGGGCGAGGACGAGGACGAGGTGGCGGCGGTGGGGCCTTTCAGTATGCCAAGCAAGAACCCTTTGAGCTTTTTCCAGAGGTGGGTAGTTCTAATGTAACTCTACCGAGCGTCAGTGATATGCCTGAAGAAAGAAGCTTGGCTTTACGTAACAACAAATTTCTGAATTATTGGAAGGCCTCTCCTTTTTATCTAGAGGAAAATGTTATGAAAAAGGTGCAAAGAACTGAGATAGAGAAATTTTCCGATAGATCTAAGTCGAATAGTACGTTGAAGCGTGATTCCCTTGCACAAATTCTACAGCTCACATCCAGGAACTTTCCTGAAGAATTGGTTGAAGATACTCTACTGTTAAATTTTCAGGTTTCAAAGGGAAGTTGCAGACCAAAAGAAAAGTTCAATGGAATCCCGGCTCAGGGACAGGATAAGGATGATAAGGAGAAGAAAGAAGGAGAAGAAGGTGAAGATGAAGATGAAGACGAAGACGATGCACAGTCCGAGGAACTTACTGATGATGATTATTATCAGAATGAATACTTCGACGACGATGAAGATGATTACAACATGGAAGAAGAAGGTGGAGGTATGGTTTTTTACTCTAATGGACTGATTAATATTATGAACCAGAATATTAGCAGAATGGAAATTGGTGGTAAGATTTGGGGCTTGTTTCTCCAACTCAAAGAATTTAATTGGTGTAGGACATTGGATTGTTTGGAAAAAATGTCGTGGCAAACGTACGTGGACGATCACCTGATGTGTGAGATTGAAGGAAACCATCTGACCTCCGCCGCAATCATCGGACACGACGGCAGTGTTTGGGCGCAGAGCTCCTCATTCCCTCAGTTTAAGGCGGAGGAGATATCGGCGATTATGAAGGATTTGGATGAGCCAGGTTCTCTTGCACCAACTGGATTACACCTGGGAGGCACTAAATACATGGTCATCCAAGGAGAGCCTGGATCCGTTGTTCGTGGCAAAAAGGGTGCTGGGGGAATCACTGTGAAGAAAACTGAGAAGGCTGTCATAATTGGGATTTATGATGAACCTTTGACTCCTGGACAATGCAATATGGTGGTTGAAAGGTTGGGAGATTACCTCATCGAACAGGCTTTGTAG 1377 43.28 MGNCLLLIHPRFDCLFSVLSCSGIIFFTEFQCIELEPSSLVQHQFAVTFMGLIPQSGYQGVVSHCVRKHFCYSHNSRKSSKRGMAFRGRGRGRGGGGGAFQYAKQEPFELFPEVGSSNVTLPSVSDMPEERSLALRNNKFLNYWKASPFYLEENVMKKVQRTEIEKFSDRSKSNSTLKRDSLAQILQLTSRNFPEELVEDTLLLNFQVSKGSCRPKEKFNGIPAQGQDKDDKEKKEGEEGEDEDEDEDDAQSEELTDDDYYQNEYFDDDEDDYNMEEEGGGMVFYSNGLINIMNQNISRMEIGGKIWGLFLQLKEFNWCRTLDCLEKMSWQTYVDDHLMCEIEGNHLTSAAIIGHDGSVWAQSSSFPQFKAEEISAIMKDLDEPGSLAPTGLHLGGTKYMVIQGEPGSVVRGKKGAGGITVKKTEKAVIIGIYDEPLTPGQCNMVVERLGDYLIEQAL 458
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 366032 373051 - ClG42_09g0002900.10 Clacu09g0029 256337
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0029 458 FunFam Profilin 328 458 - -
Clacu09g0029 458 MobiDBLite consensus disorder prediction 237 277 - -
Clacu09g0029 458 PRINTS Profilin signature 367 387 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Profilin signature 330 339 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Profilin signature 427 440 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Profilin signature 348 357 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Profilin signature 391 405 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Profilin signature 440 457 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 Pfam Profilin 328 456 IPR048278 GO:0003779(InterPro)
Clacu09g0029 458 SUPERFAMILY Profilin (actin-binding protein) 329 456 IPR036140 -
Clacu09g0029 458 PRINTS Plant profilin signature 431 444 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Plant profilin signature 354 367 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Plant profilin signature 379 393 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Plant profilin signature 444 457 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Plant profilin signature 411 426 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Plant profilin signature 398 407 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 PRINTS Plant profilin signature 328 341 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 CDD PROF 329 456 IPR005455 GO:0003779(InterPro)
Clacu09g0029 458 MobiDBLite consensus disorder prediction 215 278 - -
Clacu09g0029 458 Gene3D Dynein light chain 2a, cytoplasmic 326 457 - -
Clacu09g0029 458 PANTHER DNA-DIRECTED RNA POLYMERASE III 84 280 IPR024661 GO:0005666(PANTHER)|GO:0006383(InterPro)
Clacu09g0029 458 SMART prof_2 328 458 IPR005455 GO:0003779(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g0029 Clacu-Chr9:366032 Clacu11g0347 Clacu-Chr11:3143179 3.10E-61 dispersed
Clacu07g1338 Clacu-Chr7:28238065 Clacu09g0029 Clacu-Chr9:366032 4.00E-57 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0029 K05759 - cit:102614190 243.817