Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu09g0062 | ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTGACCACCATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACAAACTCCCTTTGGGATCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCGGACCATCCCGAAACCTTCATGGACAAGCGTCGGCGCCTCTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTCTTATCCGAAATCTTTAACAGAATTGATGGGGAAGTCCTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGAAACAGTTTCAAGAATTCATAGCTGGGCTCATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCCCGTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCGGATTGCCCTGCCGCACTTCAACAATTAACTGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCGTTTACGCAGAGTGTGATCACTGAGACATTAAGGATGGGAAACATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTGCTTACATACTTTAGATCTGTTCATCTTGACCACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAAAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGACCCATAA | 1425 | 41.33 | MDSLWDVLVVTAIFLTTIILYRNCFRLLRSKFCNKLPLGSLGWPFIGETIEFISCAYSDHPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLHPGQRMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISRVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGLKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDHNHYDCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDRIINFPTVRMKKRMPVWVKRRRDP | 474 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 628159 | 632072 | - | ClG42_09g0006200.10 | Clacu09g0062 | 256370 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu09g0062 | 474 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 415 | 424 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu09g0062 | 474 | PANTHER | CYTOCHROME P450 26 | 35 | 447 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) | |
| Clacu09g0062 | 474 | CDD | CYP90-like | 68 | 466 | - | - | |
| Clacu09g0062 | 474 | PRINTS | E-class P450 group I signature | 412 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | PRINTS | E-class P450 group I signature | 340 | 358 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | PRINTS | E-class P450 group I signature | 380 | 404 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | PRINTS | E-class P450 group I signature | 422 | 445 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 27 | 471 | - | - | |
| Clacu09g0062 | 474 | SUPERFAMILY | Cytochrome P450 | 34 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | Pfam | Cytochrome P450 | 38 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | Gene3D | Cytochrome P450 | 29 | 471 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g0062 | 474 | Coils | Coil | 307 | 327 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu09g0062 | Clacu-Chr9:628159 | Clacu09g0966 | Clacu-Chr9:9067824 | 3.50E-60 | dispersed | |
| Clacu01g2056 | Clacu-Chr1:32352584 | Clacu09g0062 | Clacu-Chr9:628159 | 5.70E-138 | transposed | |
| Clacu06g0159 | Clacu-Chr6:1805901 | Clacu09g0062 | Clacu-Chr9:628159 | 5.60E-60 | transposed | |
| Clacu06g0396 | Clacu-Chr6:4711518 | Clacu09g0062 | Clacu-Chr9:628159 | 1.40E-80 | transposed | |
| Clacu07g0414 | Clacu-Chr7:4793282 | Clacu09g0062 | Clacu-Chr9:628159 | 5.70E-95 | transposed | |
| Clacu07g0913 | Clacu-Chr7:22881363 | Clacu09g0062 | Clacu-Chr9:628159 | 5.20E-91 | transposed | |
| Clacu09g1984 | Clacu-Chr9:34706283 | Clacu09g0062 | Clacu-Chr9:628159 | 3.80E-55 | transposed | |
| Clacu10g0351 | Clacu-Chr10:4410471 | Clacu09g0062 | Clacu-Chr9:628159 | 1.60E-61 | transposed | |
| Clacu11g0638 | Clacu-Chr11:6110154 | Clacu09g0062 | Clacu-Chr9:628159 | 8.10E-86 | transposed | |
| Clacu07g1367 | Clacu-Chr7:28484042 | Clacu09g0062 | Clacu-Chr9:628159 | 2.70E-169 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu09g0062 | K12638 | - | csv:101217830 | 876.315 |