Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0062 ATGGACAGTTTATGGGATGTTTTGGTAGTGACAGCCATTTTTTTGACCACCATTATTCTCTATAGGAACTGCTTTAGACTTCTCAGATCAAAATTCTGCAACAAACTCCCTTTGGGATCTCTTGGCTGGCCTTTCATTGGTGAGACTATTGAGTTCATCTCCTGTGCTTATTCGGACCATCCCGAAACCTTCATGGACAAGCGTCGGCGCCTCTATGGGAAGGTGTTCAAGTCACATATTTTTGGAAGTCCTACCATTGTTTCTACTGATGCAGAAGTCAGTAAGTTCATTCTGCAAAGTGATGCCAAGGCTTTTGTACCGTCTTATCCGAAATCTTTAACAGAATTGATGGGGAAGTCCTCTATTTTGCTGATAAATGGGAGCTTGCAGAAGAGAATTCATGGTCTTGTGGGAGCTTTCTTCAAGTCTTCACATCTCAAAGCTCAAATAACCAAGGATATGGAGTGTTATGTCAAACTATCAATGGCAAATTGGACTGAGAACAATCCTATTTACCTTCAAGATGAAACCAAAAATATTTCCTTTCAAGTATTAGTAAAGATATTGATTAGTTTACATCCTGGTCAAAGGATGGAGTTTCTCAAGAAACAGTTTCAAGAATTCATAGCTGGGCTCATGGCTTTGCCAGTGAACATACCTGGAAGCAGGCTTTACCAATCCTTGCAGGCCAAAAGGAATATGGTCAAACTAGTAAAGAAGATAATACAAGAGAGAAAAAGCTGTGGAATTTCCCGTGTCCCAAAAGATGTCATGGAAGTTTTGCTCAAAGATGAAAATGAAGAACTAACAGATGATCTAATAGCAGAGAACATGATTGACATGATGATTCCTGGGGAAGATTCAGTGCCAATCTTAATGACTCTTGCAGTAAAATACCTCTCGGATTGCCCTGCCGCACTTCAACAATTAACTGAGGAAAACTTGAAGATGAAAGGACTGAAAGAGCAGCTCGGTGAGGCATTGCATTGGAGCGATTACTTATCGATGCCGTTTACGCAGAGTGTGATCACTGAGACATTAAGGATGGGAAACATTATAATTGGGGTGATGCGTAAGGCCATGAAAGACATGAAGATAAAAGGATACCTAATACCTAAGGGTTGGTCAGTGCTTACATACTTTAGATCTGTTCATCTTGACCACAATCACTATGACTGCCCTTACAAGTTCAATCCATGGAGGTGGCAAGACAGAGACTTGAGTAGTTGTAACTTCACTCCTTTTGGAGGTGGACAAAGACTATGCCCTGGACTTGACTTAGCCAGGCTTGAAGCTTCCATCTTCCTTCACCACTTTGTCACTCACTTCAGATGGATTGCTGAGGAAGATAGAATCATAAACTTCCCCACAGTGAGGATGAAGAAAAGGATGCCAGTTTGGGTGAAGAGAAGAAGGGACCCATAA 1425 41.33 MDSLWDVLVVTAIFLTTIILYRNCFRLLRSKFCNKLPLGSLGWPFIGETIEFISCAYSDHPETFMDKRRRLYGKVFKSHIFGSPTIVSTDAEVSKFILQSDAKAFVPSYPKSLTELMGKSSILLINGSLQKRIHGLVGAFFKSSHLKAQITKDMECYVKLSMANWTENNPIYLQDETKNISFQVLVKILISLHPGQRMEFLKKQFQEFIAGLMALPVNIPGSRLYQSLQAKRNMVKLVKKIIQERKSCGISRVPKDVMEVLLKDENEELTDDLIAENMIDMMIPGEDSVPILMTLAVKYLSDCPAALQQLTEENLKMKGLKEQLGEALHWSDYLSMPFTQSVITETLRMGNIIIGVMRKAMKDMKIKGYLIPKGWSVLTYFRSVHLDHNHYDCPYKFNPWRWQDRDLSSCNFTPFGGGQRLCPGLDLARLEASIFLHHFVTHFRWIAEEDRIINFPTVRMKKRMPVWVKRRRDP 474
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 628159 632072 - ClG42_09g0006200.10 Clacu09g0062 256370
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0062 474 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 415 424 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu09g0062 474 PANTHER CYTOCHROME P450 26 35 447 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER)
Clacu09g0062 474 CDD CYP90-like 68 466 - -
Clacu09g0062 474 PRINTS E-class P450 group I signature 412 422 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 PRINTS E-class P450 group I signature 340 358 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 PRINTS E-class P450 group I signature 380 404 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 PRINTS E-class P450 group I signature 422 445 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 FunFam 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 27 471 - -
Clacu09g0062 474 SUPERFAMILY Cytochrome P450 34 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 Pfam Cytochrome P450 38 451 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 Gene3D Cytochrome P450 29 471 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0062 474 Coils Coil 307 327 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g0062 Clacu-Chr9:628159 Clacu09g0966 Clacu-Chr9:9067824 3.50E-60 dispersed
Clacu01g2056 Clacu-Chr1:32352584 Clacu09g0062 Clacu-Chr9:628159 5.70E-138 transposed
Clacu06g0159 Clacu-Chr6:1805901 Clacu09g0062 Clacu-Chr9:628159 5.60E-60 transposed
Clacu06g0396 Clacu-Chr6:4711518 Clacu09g0062 Clacu-Chr9:628159 1.40E-80 transposed
Clacu07g0414 Clacu-Chr7:4793282 Clacu09g0062 Clacu-Chr9:628159 5.70E-95 transposed
Clacu07g0913 Clacu-Chr7:22881363 Clacu09g0062 Clacu-Chr9:628159 5.20E-91 transposed
Clacu09g1984 Clacu-Chr9:34706283 Clacu09g0062 Clacu-Chr9:628159 3.80E-55 transposed
Clacu10g0351 Clacu-Chr10:4410471 Clacu09g0062 Clacu-Chr9:628159 1.60E-61 transposed
Clacu11g0638 Clacu-Chr11:6110154 Clacu09g0062 Clacu-Chr9:628159 8.10E-86 transposed
Clacu07g1367 Clacu-Chr7:28484042 Clacu09g0062 Clacu-Chr9:628159 2.70E-169 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0062 K12638 - csv:101217830 876.315