Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0081 ATGAAAATCGAGTCGATGAGACGGGGAAGGATAAGGGAGAGGCTCCGGCGAAGCCATCTATATACGTTCGCTTGCCTTCGGGCAGACAGCACGCGGGAGGTTGACAATTCAAATCCGTTAACAGGACCTGGCTTCTCACGAACTGTCTGTTGTAATCAACCTGAAGTCCATGAGAAAAAGCCATTGAAATACTGCTCGAATTACATATCCACGACCAAATATAATGTTCTTTCTTTCTTGCCTAAGGCTCTCTTTGAGCAATTCCGGAGGGTTGCCAATTTGTACTTCCTTTTGGCTGCATTGTTATCGCTCACACCAGTTGCCCCATTTTCTGCCATGAGCATGATTGCTCCTTTGGTATTTGTTGTTGGGCTCAGTATGGCTAAAGAAGCTCTTGAGGACTGGCGTCGATTTGTGCAGGATATGAAGGTTAATCTCAGGAAAGTGAATGTCCACAAAGGGGAAGGTGTTTTTGGTTATAGACCATGGCACAAGATTCGAGTAGGAGATATAGTGAAAGTAGAGAAGGATCAGTTCTTTCCAGCCGATCTGCTTCTCTTGTCATCGTGCTATGAGGACGGTATATGTTATGTGGAAACGATGAATTTGGATGGCGAGACAAATCTCAAAGTAAAGAGATCTTTGGAAGTAACCTTACCTTTGGATGATGATGCAACTTTCAAAGATTTTACTGGAAAAATTTACTGTGAAGATCCAAACCCGAATCTTTACACCTTTGTAGGTAACTTTGAGTATGATCGGCAGATTTATCCTCTTGATCCTAATCAGATTCTCCTCAGAGATTCAAAATTGAGGAATACAGCTTATGCCTATGGGGTGGTGATATTTACTGGACATGATAGCAAAGTCATGCAGAATGCTACAAAATCCCCTTCGAAAAGAAGTAGAATAGAGAGAAAAATGGACAAAATTATTTACATCCTTTTTACTCTCCTTATATTGATCTCATCAATAAGCTCAATAGGTTTTGCTGTGAAAACAAAGTACCAAATGACAGACTGGTGGTATTTACGAACTACTGGTGATGATCACGATCCATTGTACAACCCTCGTAAGCCAACCTTATCAGGACTCATACATCTAATCACTGCTCTTATACTTTATGGATATTTGATACCCATCTCGTTATATGTTTCCATCGAGGTTGTTAAGGTTCTGCAAGCTTCCTTCATTAACCAGGATATTAACATGTATTGTGAGGAGACTGGCAATCCAGCTCGAGCTCGAACTTCAAACTTGAACGAGGAGTTGGGTCAGGTAGACACAATCCTATCCGACAAAACAGGCACTTTGACTTGCAACCAGATGGACTTTCTGAAATGTTCCATTGCTGGCACTGCATATGGTGTTAAATCTAGTGAGGTTGAACTTGCAGCTGCAAGGCAGATGGCATATGACTTTGAGGAGCAGGACGGAGAATATTCTGATGTCCAAGGGCAAAAGAATAGCCAACAGCCTTCGATGCCAAATAGCAGAGCAGGGTCCGAGATCGAACTGGAGACTGTTGTTACTTCAAATGATGGCAAGGATCAGAAGTCTGCCATAAAGTATTTTAGCTTTGAGGACAGCCGCCTAACAGGTGGAAACTGGTTGAATGAGCCCAATCATGATGTTCTTCTATTATTCTTCCGAATTTTGGCAATTTGTCACACTGCAATTCCCGAGCTGAATGAGGAGACTGGTGTTTATACATATGAGGCAGAGTCCCCGGATGAAGGTGCTTTTCTTGTTGCAGCAAGAGAATTTGGTTTTGAATTTTGTAAGAGAACACAATCAACCTTGGTTGTCCGTGAAAGATATCCTTCACCTGACCAAGTGGTTGAAAGGGAATACAAAATTTTGAATCTTTTGGATTTCACAAGCAAGAGAAAGAGAATGTCTGTAATTATTAGGGACGAGGAGGGCCAGATTATTCTTCTCTGCAAAGGTGCTGATAGCATCATCTTCGACCGACTATCAAAGAATGGAAGAACATATGAGGAAGCAACCACAAGGCATTTGAATGAATATGGAGAAGCAGGGCTGCGAACTCTGGCACTTGCTTATAGGAGGCTTGAGGAGGCTGAATATAATGCTTGGAACAACGAGTTTCAGAAGGCGAAGACATCCATTGGAGGAGATAGAGACGCAATGCTCGAGCGAGTATCCGACCTCATGGAGCGAGAATTAATCCTGGTTGGTGCTACTGCTGTGGAGGACAAGTTACAGAATGGGGTGCCCCAATGCATAGACAAACTTGCACAAGCTGGTCTTAAGATCTGGGTTCTGACAGGAGATAAGATGGAAACTGCCATCAACATAGGATATGCATGCAGTTTACTACGACAGGGAATGAAGCGGATCTGCATATCAGTAAACTCAGATTCCTTAGCACAGGATGGCAAAGAGGCCATGAAAGAAAATATTATGAATCAAATCACCAATGCCTCACAAATGATCAAGCTGGAAAAAGATCCGCATGCTGCATTTGCTTTAATCATTGATGGGAAGACTCTAACTTATGCTCTCGAGGATGATATGAAGCTTCAATTCCTTGGACTCGCTGTTGATTGTGCATCGGTCATTTGCTGTCGAGTCTCCCCCAGGCAGAAGGCACTGGTAACAAGGTTAGTGAAAGAAGGTACTGGGAAAACCACTTTAGCGATTGGTGATGGTGCAAACGATGTAGGAATGATTCAGGAGGCCGATATTGGTGTCGGTATCAGTGGGGTTGAAGGTATGCAGGCTGTGATGGCTAGTGATTTCTCTATAGCTCAATTTCGGTTTCTTGAAAGGCTTCTGGTAGTCCATGGTCATTGGTGCTACAAGAGGATTGCACAAATGATTTGCTATTTCTTCTATAAGAATATTGCATTCGGATTAACGCTATTCTACTTCGAAGCATACGCTGGATTTTCTGGGCAATCAATTTATGATGATTTCTACATGCTATCATTTAATGTCATACTCACCTCATTGCCTGTAATTTCCCTTGGAGTTTTTGAGCAAGATGTCTCTTCTGAGGTGTGCCTACAGTTCCCTGCGCTTTATCAGCAAGGACCTCGAAACTTGTTCTTTGACTGGCCTCGGATTTTCGGATGGATGGGGAACGCTCTCTACTCATCTCTAGTTACTTTCTTCCTCAATCTCATCATATTTTATGACCAGGCATTCCGCTCAGGCGGCCAAACTGCGGATATGACTGCTGTAGGAACCACCATGTTTACTTGCATCATATGGGCAGTAAATTGCCAGATTGCTCTCACAATGAGCCATTTCACCTGGATCCAACACCTTCTCGTCTGGGGTAGTATCGCCATGTGGTATTTGTTCATCTTACTCTATGGAATGATAATATCCTCTGGGAATGCGTATAAAATCTTTGTTGAAGCACTAGGTCCTGCCCCTGTTTACTGGATAGCCACCATTTTAGTAACAATTACCTGTAATCTCCCATATCTTGCCCACATATCCTTCCAAAGAAGCTTCCATCCAATGGATCATCACATTATCCAAGAAATCAAATACTACAGAAAGGATGTTGAAGATACTCACATGTGGACAAGGGAAAGATCAAAGGCAAGGCAAAAGACCAAGATAGGATTCACAGCCAGAGTAGAAGCAAAGATCAGACAATTGAAAGGAAGGCTGCAAAAGAAGCACTCTTCCCTTGGTGTGCCTCCAAATGCTGCTACTGCTATATCATGA 3708 42.77 MKIESMRRGRIRERLRRSHLYTFACLRADSTREVDNSNPLTGPGFSRTVCCNQPEVHEKKPLKYCSNYISTTKYNVLSFLPKALFEQFRRVANLYFLLAALLSLTPVAPFSAMSMIAPLVFVVGLSMAKEALEDWRRFVQDMKVNLRKVNVHKGEGVFGYRPWHKIRVGDIVKVEKDQFFPADLLLLSSCYEDGICYVETMNLDGETNLKVKRSLEVTLPLDDDATFKDFTGKIYCEDPNPNLYTFVGNFEYDRQIYPLDPNQILLRDSKLRNTAYAYGVVIFTGHDSKVMQNATKSPSKRSRIERKMDKIIYILFTLLILISSISSIGFAVKTKYQMTDWWYLRTTGDDHDPLYNPRKPTLSGLIHLITALILYGYLIPISLYVSIEVVKVLQASFINQDINMYCEETGNPARARTSNLNEELGQVDTILSDKTGTLTCNQMDFLKCSIAGTAYGVKSSEVELAAARQMAYDFEEQDGEYSDVQGQKNSQQPSMPNSRAGSEIELETVVTSNDGKDQKSAIKYFSFEDSRLTGGNWLNEPNHDVLLLFFRILAICHTAIPELNEETGVYTYEAESPDEGAFLVAAREFGFEFCKRTQSTLVVRERYPSPDQVVEREYKILNLLDFTSKRKRMSVIIRDEEGQIILLCKGADSIIFDRLSKNGRTYEEATTRHLNEYGEAGLRTLALAYRRLEEAEYNAWNNEFQKAKTSIGGDRDAMLERVSDLMERELILVGATAVEDKLQNGVPQCIDKLAQAGLKIWVLTGDKMETAINIGYACSLLRQGMKRICISVNSDSLAQDGKEAMKENIMNQITNASQMIKLEKDPHAAFALIIDGKTLTYALEDDMKLQFLGLAVDCASVICCRVSPRQKALVTRLVKEGTGKTTLAIGDGANDVGMIQEADIGVGISGVEGMQAVMASDFSIAQFRFLERLLVVHGHWCYKRIAQMICYFFYKNIAFGLTLFYFEAYAGFSGQSIYDDFYMLSFNVILTSLPVISLGVFEQDVSSEVCLQFPALYQQGPRNLFFDWPRIFGWMGNALYSSLVTFFLNLIIFYDQAFRSGGQTADMTAVGTTMFTCIIWAVNCQIALTMSHFTWIQHLLVWGSIAMWYLFILLYGMIISSGNAYKIFVEALGPAPVYWIATILVTITCNLPYLAHISFQRSFHPMDHHIIQEIKYYRKDVEDTHMWTRERSKARQKTKIGFTARVEAKIRQLKGRLQKKHSSLGVPPNAATAIS 1235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 755600 760315 + ClG42_09g0008100.10 Clacu09g0081 256389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0081 1235 SUPERFAMILY Calcium ATPase, transduction domain A 155 294 IPR008250 -
Clacu09g0081 1235 ProSitePatterns E1-E2 ATPases phosphorylation site. 433 439 IPR018303 -
Clacu09g0081 1235 SFLD C1.7: P-type atpase like 415 940 - -
Clacu09g0081 1235 Pfam Phospholipid-translocating ATPase N-terminal 50 116 IPR032631 -
Clacu09g0081 1235 Gene3D - 428 440 IPR023214 -
Clacu09g0081 1235 SUPERFAMILY HAD-like 419 933 IPR036412 -
Clacu09g0081 1235 Pfam Phospholipid-translocating P-type ATPase C-terminal 917 1165 IPR032630 -
Clacu09g0081 1235 NCBIfam HAD-IC family P-type ATPase 861 970 IPR001757 GO:0005215(InterPro)|GO:0005524(InterPro)|GO:0016020(InterPro)|GO:0016887(InterPro)
Clacu09g0081 1235 MobiDBLite consensus disorder prediction 483 501 - -
Clacu09g0081 1235 FunFam Phospholipid-transporting ATPase 733 929 - -
Clacu09g0081 1235 Pfam Cation transport ATPase (P-type) 555 661 - -
Clacu09g0081 1235 SFLD p-type atpase 415 940 IPR044492 -
Clacu09g0081 1235 SUPERFAMILY Calcium ATPase, transmembrane domain M 59 1161 IPR023298 -
Clacu09g0081 1235 NCBIfam phospholipid-translocating P-type ATPase 64 1173 IPR006539 GO:0000287(InterPro)|GO:0005524(InterPro)|GO:0015914(InterPro)|GO:0016020(InterPro)|GO:0140326(InterPro)
Clacu09g0081 1235 MobiDBLite consensus disorder prediction 478 501 - -
Clacu09g0081 1235 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 532 696 IPR023299 GO:0000166(InterPro)
Clacu09g0081 1235 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 43 1179 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Clacu09g0081 1235 Gene3D - 441 465 IPR023299 GO:0000166(InterPro)
Clacu09g0081 1235 Gene3D - 124 297 - -
Clacu09g0081 1235 PRINTS P-type cation-transporting ATPase superfamily signature 889 908 - -
Clacu09g0081 1235 PRINTS P-type cation-transporting ATPase superfamily signature 431 445 - -
Clacu09g0081 1235 FunFam Phospholipid-transporting ATPase 600 731 - -
Clacu09g0081 1235 FunFam Phospholipid-transporting ATPase 125 295 - -
Clacu09g0081 1235 Gene3D - 729 929 IPR023214 -
Clacu09g0081 1235 Gene3D - 594 708 IPR023299 GO:0000166(InterPro)
Clacu09g0081 1235 CDD P-type_ATPase_APLT_Dnf-like 66 1048 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g0874 Clacu-Chr6:11039642 Clacu09g0081 Clacu-Chr9:755600 0.00E+00 dispersed
Clacu08g0999 Clacu-Chr8:20034903 Clacu09g0081 Clacu-Chr9:755600 1.30E-175 dispersed
Clacu09g0081 Clacu-Chr9:755600 Clacu09g0159 Clacu-Chr9:1502362 9.30E-12 dispersed
Clacu09g0081 Clacu-Chr9:755600 Clacu05g2515 Clacu-Chr5:33258268 0.00E+00 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0081 K01530 - csv:101221220 2360.1