Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g0088 | ATGAATCTAGGTGCGGCGGAGGAAGAATCGCCGCAGGAGATTCATATTCCGGCCGAAATCGATTGGCAAATGCTCGATAAATCTAAATTCTTCTTTCTCGGTGCAGCGTTGTTTTCAGGTGTTTCGGCTTCTCTTTACCCTATGGTGGTGTTGAAAACTCGGCAACAGGTTGCTCATTCGCAACTTCCTTGCATCAGAACTGCATTTTCACTTGTCCGCCATGAAGGTTTTCGAGCTCTCTACCGAGGATTTGGTACTTCTCTAATGGGGACTATCCCGGCTAGAGCTCTATACATGGGAGCTCTTGAGATTACAAAGAGCTATGTCGGAACTGCCACCATTAAAGTGGGATTTCCAGAGACTACTGCAGCTACCATGGCTAACGCAGCTGCTGGATTGAGTGCTGCAATGGCAGCTCAGCTTGTGTGGACTCCTGTTGATGTTGTGAGTCAAAGGCTCATGGTTCAACCTAGCTACAACAATCCCAATTCTTCCTCAACTCATTACATCAATGGAATCGATGCATTTAGAAAGATCCTCAATGCCGACGGCCTCCGAGGCCTCTACCGAGGATTCGGGATATCGATTTTGACCTACGCACCATCGAATGCTGTGTGGTGGGCTTCTTATTATGTAGCCCAGCGGCTAGTTTGGGGTGGAATTGGCTGCTGTTATCATGCAAAGAAGGTTGATGAAGGCAATGAAAATGGAGGTTGTAGTAATGTCTACAAACCGGATTCCAAGACTGTGATTGCGGTTCAGGGGGCGAGCGCAGCAATGGCCGGGAGTATATCGGCTTTGATAACAATGCCACTTGATACAATCAAGACAAGATTGCAAGTTTTGGATGGGGATGAAAATGGGAGAAGAGGGCCAACTATAGGACAGACATTGAGGAATTTGGTAAGGGAAGGAGGGTGGACGGCATGTTACCGAGGCTTGGCACCGCGATGCGCATCAATGTCGATGTCTGCAACGACGATGATCACTACATATGAGTTTTTGAAACGGCTATCAACAAAGAATCAAGAGAGTTTAACAAGCTAA | 1047 | 47.18 | MNLGAAEEESPQEIHIPAEIDWQMLDKSKFFFLGAALFSGVSASLYPMVVLKTRQQVAHSQLPCIRTAFSLVRHEGFRALYRGFGTSLMGTIPARALYMGALEITKSYVGTATIKVGFPETTAATMANAAAGLSAAMAAQLVWTPVDVVSQRLMVQPSYNNPNSSSTHYINGIDAFRKILNADGLRGLYRGFGISILTYAPSNAVWWASYYVAQRLVWGGIGCCYHAKKVDEGNENGGCSNVYKPDSKTVIAVQGASAAMAGSISALITMPLDTIKTRLQVLDGDENGRRGPTIGQTLRNLVREGGWTACYRGLAPRCASMSMSATTMITTYEFLKRLSTKNQESLTS | 348 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 846194 | 847240 | + | ClG42_09g0008800.10 | Clacu09g0088 | 256396 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g0088 | 348 | SUPERFAMILY | Mitochondrial carrier | 23 | 335 | IPR023395 | - | |
Clacu09g0088 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 26 | 108 | IPR018108 | - | |
Clacu09g0088 | 348 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 8 | 344 | - | - | |
Clacu09g0088 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 123 | 216 | IPR018108 | - | |
Clacu09g0088 | 348 | Pfam | Mitochondrial carrier protein | 253 | 341 | IPR018108 | - | |
Clacu09g0088 | 348 | Pfam | Mitochondrial carrier protein | 36 | 110 | IPR018108 | - | |
Clacu09g0088 | 348 | Pfam | Mitochondrial carrier protein | 125 | 217 | IPR018108 | - | |
Clacu09g0088 | 348 | Gene3D | Mitochondrial carrier domain | 30 | 347 | IPR023395 | - | |
Clacu09g0088 | 348 | PRINTS | Mitochondrial carrier protein signature | 81 | 99 | IPR002067 | GO:0055085(InterPro) | |
Clacu09g0088 | 348 | PRINTS | Mitochondrial carrier protein signature | 132 | 154 | IPR002067 | GO:0055085(InterPro) | |
Clacu09g0088 | 348 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 249 | 338 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu09g0088 | Clacu-Chr9:846194 | Clacu10g0165 | Clacu-Chr10:1974042 | 7.10E-10 | dispersed | |
Clacu05g0786 | Clacu-Chr5:6756815 | Clacu09g0088 | Clacu-Chr9:846194 | 6.20E-64 | transposed | |
Clacu05g1976 | Clacu-Chr5:28864369 | Clacu09g0088 | Clacu-Chr9:846194 | 1.80E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g0088 | K15121 | - | csv:101210602 | 630.943 |