Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0110 ATGGCGAATTTCCATCGCTCTTCTTCACTTTTCTTCTTCTTCATCTTCTGTTTCGTCCCTGTAATTTTCTCTCGATCGCCGGATAATCAAGAGACATTCATCGTTCATGTCTCTAAATCGGAGAAGCCTTCTTTATTTTCCTCCCATCGTCACTGGCACTCTTCCATTCTCGAATCACTCTCTCCTTCTCCTCATCCGACGAAGCTTCTTTACAACTACGAACATGCCGTTAATGGATTCTCCGCACGCATCACGGCTGCTCAGGCGGCGGAGCTGCGTCATGTTCCCGGTGTTATTTCGGTGATTCCTGATCGGATCCGTCAGCTTCATACGACTCGGACGCCTCATTTCTTGGGACTGGCGGATAACCTAGGGCTCTGGCCTGACACGAATTATGCCGAAGATGTGATTATTGGCGTTCTTGATACCGGAATTTGGCCGGAGAGGCCGAGTTTCTCCGATGAAGGTTTGTCTCCGGTTCCGGCAAGCTGGAAAGGCACCTGCGAGGCTGGGGAGGGATTTTCGGCTTCGACCTGTAATCGGAAGATTATTGGTGCGAGAGCGTACTTTAACGGATACGAGTCTAATTTAGGAAGATCGCTTCGTTCTTCGGATTTCAAATCTGCTAGGGATTCGGATGGCCATGGAACTCACACGGCCTCTACGGCTGCAGGTTCGTTCGTTAAAAATGCTAGTTTTTTCCAATACGCTCGTGGAGAAGCCAGAGGAATGGCGAGTAGAGCTCGTATCGCTGCCTACAAGATCTGCTGGGAATTTGGTTGTTTCGATTCTGACATACTCGCCGCTATGGATCAGGCGATTGCCGATGGCGTTCACATCATCTCTCTCTCAGTCGGATCCTCGGGCCGTGCGCCCGCGTACTATCGAGATTCCATTGCAATTGGAGCGTTTGGGGCAATGCAGCACGGTGTCGTCGTCTCTTGCTCCGCCGGTAATTCCGGTCCCGGTCCTTACACGGCTGTGAACATCGCTCCTTGGATCCTCACCGTCGGTGCCTCCACAATCGACAGGGAGTTTCTTGCCGATGTCATTCTCGGAGACGGCAGGGTTTTCAGCGGCGTGTCGCTGTACTCCGGCGAACCCCTTGGCGATTCCAAGCTTCCGTTGGTTTACGGTGGAGATTGCGGTAGCAGGTATTGTTATTCTGGATCCCTCGATCCGGCGAAAGTCGCAGGAAAAATTGTCGTGTGCGACCGAGGAGGGAACGCCAGAGTCGCCAAAGGAGGCGCAGTGAAGTCCGCCGGTGGTCTTGGTATGGTACTCGCCAATACGGAGGAAAACGGCGAAGAGCTCTTAGCAGATTCTCATCTTATTCCAGGAACAATGGTCGGTGAAATCGCCGGCAACAAGCTTAGAAACTACATCCATTCGGATCCGAATCCAACTGCTACAATCGTGTTTCGCGGAACTGTCATTGGCAATTCGCCTTCAGCTCCGAGAGTCGCCGCCTTCTCCAGCCGTGGTCCGAACTACCGGACGGCGGAGATTCTAAAACCAGATGTTATAGCTCCGGGAGTTAACATTTTGGCCGGCTGGAGCGGCTACAGCAGTCCGACCAGTCTAAGCATCGATTCTCGAAGAGTCGAGTTCAATATCATCTCCGGAACTTCAATGTCTTGCCCTCACGTCAGTGGCGTCGCCGCCTTGCTCCGTAAGGCTTTTCCGACGTGGTCACCGGCTGCTATCAAATCTGCTCTGATAACCACTTCTTACTCTTTGGACAGTTCCGGCAGCCCAATCAAAGATCTCTCCACCAGCAAAGAATCAAATCCATTCGTCCATGGCGCCGGCCACATCGATCCCAACAAAGCTCTGAATCCGGGCCTGATTTATGATCTCACTCCTCAAGACTACGTTTCATTTCTCTGCTCAATCGGTTACGACTCTAGACAAATAGCTGTTTTCGTGAAGGATTCTTCATACTCCCAACTATGTGAGCACAAACTGAGCAATCCAGGCAACCTGAATTACCCATCATTCTCTGTCGTGTTCGACGGCGAGGAGGTGGTGAAATATACAAGAACAGTGACAAATGTAGGAGATGAAACTGATGTTTATGAAGTGAAAGTAGAATCCCCACAAGGAGTTGAAATCAGTGTTGTTCCAAACAAGCTGGAGTTCAATGCAAAGAAGACAACACAGTCTTATGAGATTACATTCACCAAAATCAGTGGATTCAAGGAATCAGCAAGCTTCGGATCAATTCAATGGAGTGATGGAAGCCACAATGTTAGGAGTCCAATTGCTGTCTCGTTCAACACTGGATCCATAGCTTCGATGTAA 2304 50.3 MANFHRSSSLFFFFIFCFVPVIFSRSPDNQETFIVHVSKSEKPSLFSSHRHWHSSILESLSPSPHPTKLLYNYEHAVNGFSARITAAQAAELRHVPGVISVIPDRIRQLHTTRTPHFLGLADNLGLWPDTNYAEDVIIGVLDTGIWPERPSFSDEGLSPVPASWKGTCEAGEGFSASTCNRKIIGARAYFNGYESNLGRSLRSSDFKSARDSDGHGTHTASTAAGSFVKNASFFQYARGEARGMASRARIAAYKICWEFGCFDSDILAAMDQAIADGVHIISLSVGSSGRAPAYYRDSIAIGAFGAMQHGVVVSCSAGNSGPGPYTAVNIAPWILTVGASTIDREFLADVILGDGRVFSGVSLYSGEPLGDSKLPLVYGGDCGSRYCYSGSLDPAKVAGKIVVCDRGGNARVAKGGAVKSAGGLGMVLANTEENGEELLADSHLIPGTMVGEIAGNKLRNYIHSDPNPTATIVFRGTVIGNSPSAPRVAAFSSRGPNYRTAEILKPDVIAPGVNILAGWSGYSSPTSLSIDSRRVEFNIISGTSMSCPHVSGVAALLRKAFPTWSPAAIKSALITTSYSLDSSGSPIKDLSTSKESNPFVHGAGHIDPNKALNPGLIYDLTPQDYVSFLCSIGYDSRQIAVFVKDSSYSQLCEHKLSNPGNLNYPSFSVVFDGEEVVKYTRTVTNVGDETDVYEVKVESPQGVEISVVPNKLEFNAKKTTQSYEITFTKISGFKESASFGSIQWSDGSHNVRSPIAVSFNTGSIASM 767
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 1017185 1019488 - ClG42_09g0011000.10 Clacu09g0110 256418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0110 767 Pfam Fibronectin type-III domain 661 757 IPR041469 -
Clacu09g0110 767 Pfam PA domain 374 458 IPR003137 -
Clacu09g0110 767 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 110 IPR037045 -
Clacu09g0110 767 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Clacu09g0110 767 Gene3D - 629 760 - -
Clacu09g0110 767 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 755 IPR045051 -
Clacu09g0110 767 CDD PA_subtilisin_like 349 472 - -
Clacu09g0110 767 FunFam subtilisin-like protease SBT1.5 343 479 - -
Clacu09g0110 767 FunFam Subtilisin-like protease SBT1.5 629 760 - -
Clacu09g0110 767 Pfam Subtilase family 135 590 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Clacu09g0110 767 CDD Peptidases_S8_3 108 578 IPR034197 -
Clacu09g0110 767 Gene3D Peptidase S8/S53 domain 135 625 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu09g0110 767 FunFam Subtilisin-like protease SBT1.5 135 355 - -
Clacu09g0110 767 Pfam Peptidase inhibitor I9 32 110 IPR010259 -
Clacu09g0110 767 ProSiteProfiles Serine proteases, subtilase domain profile. 108 612 - -
Clacu09g0110 767 SUPERFAMILY Subtilisin-like 109 616 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Clacu09g0110 767 SUPERFAMILY PA domain 363 465 IPR046450 -
Clacu09g0110 767 Gene3D - 343 480 - -
Clacu09g0110 767 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Clacu09g0110 767 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Clacu09g0110 767 PRINTS Subtilisin serine protease family (S8) signature 211 224 IPR015500 -
Clacu09g0110 767 FunFam Subtilisin-like protease SBT1.9 22 110 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu07g0648 Clacu-Chr7:11384816 Clacu09g0110 Clacu-Chr9:1017185 3.70E-200 dispersed
Clacu07g0649 Clacu-Chr7:11480330 Clacu09g0110 Clacu-Chr9:1017185 7.60E-193 dispersed
Clacu08g1797 Clacu-Chr8:27298284 Clacu09g0110 Clacu-Chr9:1017185 5.90E-214 dispersed
Clacu08g1807 Clacu-Chr8:27392404 Clacu09g0110 Clacu-Chr9:1017185 1.20E-139 dispersed
Clacu09g0110 Clacu-Chr9:1017185 Clacu09g0137 Clacu-Chr9:1294650 2.30E-202 dispersed
Clacu01g0994 Clacu-Chr1:13140100 Clacu09g0110 Clacu-Chr9:1017185 1.40E-82 transposed
Clacu01g1302 Clacu-Chr1:23399807 Clacu09g0110 Clacu-Chr9:1017185 1.60E-118 transposed
Clacu01g2489 Clacu-Chr1:35283850 Clacu09g0110 Clacu-Chr9:1017185 4.00E-162 transposed
Clacu05g1711 Clacu-Chr5:25924186 Clacu09g0110 Clacu-Chr9:1017185 1.00E-149 transposed
Clacu07g0813 Clacu-Chr7:20617322 Clacu09g0110 Clacu-Chr9:1017185 5.40E-136 transposed
Clacu08g1226 Clacu-Chr8:22159748 Clacu09g0110 Clacu-Chr9:1017185 1.70E-143 transposed
Clacu03g1549 Clacu-Chr3:29058726 Clacu09g0110 Clacu-Chr9:1017185 3.30E-217 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0110 - - - 0.0