Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g0209 | ATGGATTTCTGGCCAGAATTCCTTGCAAGCAGTTGGGGTAGAGAATTTGTCGCTGGTGGATTTGGTGGCATCGCCGGCATAATCTCCGGCTACCCACTTGATACTCTTCGAGTAAGGCAACAGCAATCCATTTCTGGTTCTGCTTTGAAAATCTTTCGCAATATCATTGCCAACGATGGCGTTGCTGGTCTTTACAGAGGCATGGCTGCTCCTTTGGCCTCTGTCACTTTCCAGAACGCCGCCGTGTTTCAGATCTACGCCGTTCTTTCTCGGGCATTCAACTCCTCCTCCCAATCCAATGGTGACCCTCCAAGCTATAAGGCCGTGGCCTTTGGAGGATTTGGCACCGGAGCTCTTCAGAGCTTCATCTTGTCGCCGGTAGAGCTTGTGAAGATCCGCCTGCAATTGCAGAGTTCAAGCCATGCAGCAGCATCACACCAACAATTAATTTCTTCTTCCCATAGAGGTCCATTGAGCGTCGCCAAAAGCATCTGCAAAACAGAAGGATTGAGAGGAATTTACAGAGGACTTACCATAACCATGCTGAGAGATGCACCTGCACACGGCATCTATTTCTGGACATATGAGTGCATGAGAGAGCAGTTTCATCCTGGCTGCCGGAAGACCGGCCAAGAGAGCGTCGGCACAATGCTGGTCGCCGGAGGGCTTGCCGGAGTTGCTAGCTGGGTTTTTTGTTATCCCTTGGATGTATTGAAGACTAGAATTCAGGGTCAGACACAAAGTTCACCTCGAAAGTACAATGGAATTGTGGATTGTCTTAGCAAAAGTGTGAGAGAAGAGGGTTACAGAGTGCTATGGCGAGGGCTCGGGACAGCAGTTGCCAGAGCATTTGTGGTAAATGGGGCCATTTTTGCTGCTTATGAGATAACATTGAGGTGTTTGTTTAGCAATGGAAGCAATCAGACACAACAATAA | 936 | 48.82 | MDFWPEFLASSWGREFVAGGFGGIAGIISGYPLDTLRVRQQQSISGSALKIFRNIIANDGVAGLYRGMAAPLASVTFQNAAVFQIYAVLSRAFNSSSQSNGDPPSYKAVAFGGFGTGALQSFILSPVELVKIRLQLQSSSHAAASHQQLISSSHRGPLSVAKSICKTEGLRGIYRGLTITMLRDAPAHGIYFWTYECMREQFHPGCRKTGQESVGTMLVAGGLAGVASWVFCYPLDVLKTRIQGQTQSSPRKYNGIVDCLSKSVREEGYRVLWRGLGTAVARAFVVNGAIFAAYEITLRCLFSNGSNQTQQ | 311 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 1931961 | 1933003 | - | ClG42_09g0020900.10 | Clacu09g0209 | 256517 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g0209 | 311 | SUPERFAMILY | Mitochondrial carrier | 12 | 295 | IPR023395 | - | |
Clacu09g0209 | 311 | PRINTS | Mitochondrial carrier protein signature | 221 | 243 | IPR002067 | GO:0055085(InterPro) | |
Clacu09g0209 | 311 | PRINTS | Mitochondrial carrier protein signature | 174 | 192 | IPR002067 | GO:0055085(InterPro) | |
Clacu09g0209 | 311 | PRINTS | Mitochondrial carrier protein signature | 119 | 137 | IPR002067 | GO:0055085(InterPro) | |
Clacu09g0209 | 311 | PRINTS | Mitochondrial carrier protein signature | 15 | 28 | IPR002067 | GO:0055085(InterPro) | |
Clacu09g0209 | 311 | Gene3D | Mitochondrial carrier domain | 105 | 310 | IPR023395 | - | |
Clacu09g0209 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 212 | 300 | IPR018108 | - | |
Clacu09g0209 | 311 | Pfam | Mitochondrial carrier protein | 11 | 95 | IPR018108 | - | |
Clacu09g0209 | 311 | Pfam | Mitochondrial carrier protein | 212 | 302 | IPR018108 | - | |
Clacu09g0209 | 311 | Pfam | Mitochondrial carrier protein | 110 | 202 | IPR018108 | - | |
Clacu09g0209 | 311 | Gene3D | Mitochondrial carrier domain | 4 | 101 | IPR023395 | - | |
Clacu09g0209 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 104 | 201 | IPR018108 | - | |
Clacu09g0209 | 311 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 13 | 92 | IPR018108 | - | |
Clacu09g0209 | 311 | PANTHER | MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED | 8 | 301 | IPR050567 | GO:0006810(PANTHER)|GO:0022857(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu09g0209 | Clacu-Chr9:1931961 | Clacu10g2190 | Clacu-Chr10:35013085 | 7.30E-22 | dispersed | |
Clacu07g1308 | Clacu-Chr7:27906342 | Clacu09g0209 | Clacu-Chr9:1931961 | 6.30E-127 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g0209 | K15109 | - | csv:101222165 | 545.814 |