Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g0332 | ATGCCGGTTGACGGTTCTTCAACTGCCGCCTCCACCGTATGCGTCACCGGCGCCGGCGGCTTCATTGCCTCATGGATCGTCAAACTCCTCCTCCAGAAAGGCTATATCGTAAGAGGAACCGTCAGAAATCCAGAGGATCCGAAGAACCGCCATTTGAGAGAACTCGAAGGTGCGGCGGAGCGGCTCAGTTTGCATAAAGCGGATCTTCTCGATTTCGAAAGCCTCAGAGCGGCGATCGACGGCTGCGATGGCGTTTTCCACACTGCGTCGCCTGTGACTGACGATCCGGAGCAAATGGTGGAACCGGCGGTTAACGGAACGAAGAACGTCATAATCGCGGCAGCCGAAGCCAATGTCCGTCGCGTGGTGTTCACTTCCTCGATTGGTGCAGTCTACATGGACCCCAACCGTGGTCCAGACGACATCGTCGACGAGTCCTGTTGGAGCGATCTCGAGTTCTGTAAGAACACAAAGAATTGGTATTGCTATGGAAAAGCTGTGGCGGAGCAAGCCGCATGGGAGGTTGCGAAGGAGAAGGGGGTGGATTTGGTGGTGGTGAATCCAGTGCTGGTGCTAGGGCCATTGTTGCAATCCACCATTAATGCGAGCATAATTCATATACTGAAGTACTTGACTGGATCAGCTAAGACGTATGCCAATTCCGTTCAGGCATACGTACACGTGAAGGATGTGGCTCTAGCTCATATCCTTGTGTACGAGACTCCCTCCGCCGCCGGCCGGTACCTCTGCGCCGAGAGTGTGCTTCACAGAGGGGAGGTTGTTGAGATTCTGGCCAAATTGTTCCCGGAATATCCTGTTCCTACCAAGTGCTCAGATGAAGTGAACTCGAGGAAGAAGGCATACAACTTCTCCAACAAGAAGCTGAAGGACTTGGGATTGGAGTTCACTCCAGCAAAGCAGTGTTTATACGACACCGTTAAGAGCCTACAAGAGAAAGGTCATCTCCCAATTCCCACTTCTACTCAACCAGTTGACTCCATTCGAATTCAATCTTGA | 1017 | 52.41 | MPVDGSSTAASTVCVTGAGGFIASWIVKLLLQKGYIVRGTVRNPEDPKNRHLRELEGAAERLSLHKADLLDFESLRAAIDGCDGVFHTASPVTDDPEQMVEPAVNGTKNVIIAAAEANVRRVVFTSSIGAVYMDPNRGPDDIVDESCWSDLEFCKNTKNWYCYGKAVAEQAAWEVAKEKGVDLVVVNPVLVLGPLLQSTINASIIHILKYLTGSAKTYANSVQAYVHVKDVALAHILVYETPSAAGRYLCAESVLHRGEVVEILAKLFPEYPVPTKCSDEVNSRKKAYNFSNKKLKDLGLEFTPAKQCLYDTVKSLQEKGHLPIPTSTQPVDSIRIQS | 338 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 2828996 | 2835120 | + | ClG42_09g0033200.10 | Clacu09g0332 | 256640 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g0332 | 338 | Gene3D | - | 4 | 337 | - | - | |
Clacu09g0332 | 338 | FunFam | Cinnamoyl-CoA reductase 1 | 4 | 335 | - | - | |
Clacu09g0332 | 338 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 11 | 317 | IPR036291 | - | |
Clacu09g0332 | 338 | CDD | FR_SDR_e | 13 | 300 | - | - | |
Clacu09g0332 | 338 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 12 | 315 | IPR050425 | GO:0016616(PANTHER) | |
Clacu09g0332 | 338 | Pfam | NAD dependent epimerase/dehydratase family | 13 | 245 | IPR001509 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu02g2351 | Clacu-Chr2:36580555 | Clacu09g0332 | Clacu-Chr9:2828996 | 1.40E-84 | dispersed | |
Clacu02g2359 | Clacu-Chr2:36637662 | Clacu09g0332 | Clacu-Chr9:2828996 | 1.50E-78 | dispersed | |
Clacu05g2470 | Clacu-Chr5:32822844 | Clacu09g0332 | Clacu-Chr9:2828996 | 6.60E-62 | dispersed | |
Clacu09g0332 | Clacu-Chr9:2828996 | Clacu10g1294 | Clacu-Chr10:25869989 | 6.00E-147 | dispersed | |
Clacu09g0332 | Clacu-Chr9:2828996 | Clacu11g2087 | Clacu-Chr11:31671316 | 2.80E-75 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g0332 | K09753 | - | csv:101213412 | 632.098 |