Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0450 ATGTTTTCCCATGCATTTCCATTCCTTCATCACAAACCTATGATGGATTCCGGCAACCTCTCCTCCTCCTCCCCCACCGCGGCCTTGCCTCCTCCAATTTCTGTTGGAAACGGGCTCCGGTTGCTCCTCGATGTCCAAATCTTGGAAATCTCTTTCGCTCTTTTTGTGTTCTTAGTCATCCATGTCATTAGACAGAAGAGACGATATGGCTTGCCTATATGGCCAATCGTTGGAATGTTACCGGCTTTGATTACGGCAGCACGTGGGAATCTCTACGACTGGATTACTGACCTCCTCCGCCATCACAAGGGCACGTTTCAATTTCGAGGCCCCTGGCTTACTAGTCTCAATTGTGTCGTCACTGCTGATCCTCGAAACTTGGAGCACCTTCTCAAGACCAAATTTTCCTCCTACCCAAAAGGGCCATTCTTTCGTGACACGGTGAGAGACCTACTCGGTGACGGAATATTCGGTGCCGACGATGAGACGTGGCAACGTCAAAGGAAGGTGGCGAGCATTGAGTTTCACTCGGCGAGGTTCCGACAAATGACGGTGGAGTCGTTGGTGGAGCTCGTCCACTCGAGGTTAGAAGCGGTGTTGGAGGATTTCGCGGGACGGTCGGCAACGGTGGACCTGCAGGATGTTCTTCTGAGGTTAACGTTTGACAATGTGTGTATGATTGCCTTTGGGGTGGATCCTGGCTGTTTGCGCGGCGGCTTACCGGAGATTCCATTTGCTAAGGCCTTTGAGGATGCCACTGAAGTTACTGTTATACGCTTCATCACACCTACTTTCGTATGGAAAGCCATGAGGTACCTGAACTTGGGTATGGAAAAGAAACTGAAGCAATCGATCAAAGCCGTCGACGAATTTGCAGATAATGTGATTCGAACACGGAAGAGAGAGCTCTCTACGGCGGCGCAACCGCAAGCCGATAACCAAAGATCTGACCTATTAACCGTATTCATGAAGCTAAGAGACGAGCAAGGGCGGCCGTTCTCCGACAAGTTTCTCAGAGATATTTGCGTCAATTTCATACTTGCCGGAAGAGACACATCTTCCGTAGCATTGAGTTGGTTCTTCTGGTTGCTCGATCAAAATCCCCATGTGGAAGACAAAATTCTGGCAGAAATTGGCAGAATCGTCGGCGAACGAGAAGAAGCCAAAACCAGAGAGCTTCGATTCGATTTGTTAGTGTTCAAACCAGAGGAAATCAAGAAAATGGAGTATTTGCACGCCGCCATTTCCGAAGCCCTAAGATTGTATCCATCAGTTCCAGTCGATCACAAAGAGGTCGTGGAGGACGATGTATTCCCAGACGGAACGATTCTGAAGAAAGGAACGAAAATCATCTACGCAATATACGCAATGGGAAGAATGGAAGCGATTTGGGGGAAAGATTGTCGCGAATTCAAACCTGAGAGATGGATGAGAGACGGTCGGTTCATGAGCGAATCGGCGTATCGGTTCACAGCCTTCAACGGCGGCCCTCGGCTGTGTCTTGGAAAGGATTTTGCGTACTATCAAATGAAATACGTCGCCGCTTCGATCATGAGCCGGTACCGGGTGGCGGTGGTGACGGGCCATTCAGTGGAGCCGAAGCTTGCCCTAACTTTCTACATGAAAAACGGCCTGAAAGTCAATTTGATTAAACGAGAAGAGGGGCAGATTCGGAAATACATGAAGTTAAATTGA 1695 49.03 MFSHAFPFLHHKPMMDSGNLSSSSPTAALPPPISVGNGLRLLLDVQILEISFALFVFLVIHVIRQKRRYGLPIWPIVGMLPALITAARGNLYDWITDLLRHHKGTFQFRGPWLTSLNCVVTADPRNLEHLLKTKFSSYPKGPFFRDTVRDLLGDGIFGADDETWQRQRKVASIEFHSARFRQMTVESLVELVHSRLEAVLEDFAGRSATVDLQDVLLRLTFDNVCMIAFGVDPGCLRGGLPEIPFAKAFEDATEVTVIRFITPTFVWKAMRYLNLGMEKKLKQSIKAVDEFADNVIRTRKRELSTAAQPQADNQRSDLLTVFMKLRDEQGRPFSDKFLRDICVNFILAGRDTSSVALSWFFWLLDQNPHVEDKILAEIGRIVGEREEAKTRELRFDLLVFKPEEIKKMEYLHAAISEALRLYPSVPVDHKEVVEDDVFPDGTILKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWMRDGRFMSESAYRFTAFNGGPRLCLGKDFAYYQMKYVAASIMSRYRVAVVTGHSVEPKLALTFYMKNGLKVNLIKREEGQIRKYMKLN 564
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 3917298 3919612 + ClG42_09g0045000.10 Clacu09g0450 256758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0450 564 PRINTS E-class P450 group I signature 337 354 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS E-class P450 group I signature 412 430 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS E-class P450 group I signature 500 523 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS E-class P450 group I signature 357 383 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS E-class P450 group I signature 490 500 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 493 502 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Clacu09g0450 564 PRINTS P450 superfamily signature 500 511 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS P450 superfamily signature 348 365 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS P450 superfamily signature 491 500 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PRINTS P450 superfamily signature 413 424 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 Gene3D Cytochrome P450 69 562 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 CDD CYP86A 106 545 - -
Clacu09g0450 564 Pfam Cytochrome P450 72 537 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 PANTHER CYTOCHROME P450 61 545 - -
Clacu09g0450 564 SUPERFAMILY Cytochrome P450 70 552 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Clacu09g0450 564 FunFam Cytochrome P450 62 555 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g1674 Clacu-Chr1:28868300 Clacu09g0450 Clacu-Chr9:3917298 1.60E-39 dispersed
Clacu01g1675 Clacu-Chr1:28879202 Clacu09g0450 Clacu-Chr9:3917298 1.60E-97 dispersed
Clacu03g0086 Clacu-Chr3:1050234 Clacu09g0450 Clacu-Chr9:3917298 7.10E-123 dispersed
Clacu09g0450 Clacu-Chr9:3917298 Clacu10g1629 Clacu-Chr10:29650224 1.80E-103 dispersed
Clacu10g1200 Clacu-Chr10:24767446 Clacu09g0450 Clacu-Chr9:3917298 4.00E-209 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0450 K15402 - csv:101212202 1035.4