Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g0481 | ATGGTGGCTGAAGCTGAGGTTGTTGTTTGTTCGAAGAGCCTCCCGGTTTTGGAGGTCCCGTATTTCGGTAAAGAGACTCATCTTGTGGATGAAATTGAGTCCATCGATGGTGGGATTTCGGTTGATCCGACTCTCAATCGTGTTCGTGCTTCCGAATCTGTTTGTTCCAGTTCTCAATCGGATATTAAACCCATGAAGAAAATTCCAGATTCCGACGTCGATACGGAGAACGGAAGGGAATTTCCGAGCCTCCGGTCGGGGAGCTTTGCTGATATTGGCCCTAGGAGATACATGGAAGATGAACATATACGGATAGATGATTTGTCTTCACATTTAGGATCGCTCTTTAAGTTTCCCAAGCCAAGTGCTTTCTATGGGGTATTCGATGGACATGGAGGTCCTGAAGCAGCAGCTTATATCAGAAAGAACGTTCTTAGACTCTTTTTTGAGGATGTTAGTTTTCCTCAAATTCCAGATATTGGTGAAGTCTTGCCGGAGGAGATAGAAAATTGTCTCCGAAAAGCATTTCTTCTAGCTGATCGAGCTCTGGCTGATGATTCCAGTGTCAGTAGTTCATCCGGGACAACGGCCCTGACAGCTCTTGTGCTTGGAAGGCATTTAATGGTGGCAAATGCTGGAGATTGCCGAGCTGTTCTCAGCCGGAATGGGGAGGCAGTAGATATGTCTCAAGACCACCGGCCAGTTTATTCTCCAGAGAAGCAACGGGTAGAAGAGTTGGGTGGCTTTGTTGATGGTGGCTATCTCAACGGGGTTTTATCGGTTTCCAGGGCTTTGGGGGATTGGGACATGAAGCTCCCTGATGGTTCTCCTTCGCCTCTCATTGCAGAACCAGAATGCAGGCAGGTGGTGCTTACAGAAGAGGATGAGTTCTTGATCATAGCCTGTGATGGGATTTGGGACGTGATGTCGAGCCAACAAGCAGTCAATGTAGTTCGACAGGGGCTTCAACGTCACGATGACCCTGAGCGGTGTGCTCGAGACCTTGTCCTTCAGGCTTTGCGACTAGACTCATTCGACAACCTCACTGTTGTTGTTGTTTGCTTCTCCAGTTTCCATCCTGGCAATTCTCCACGACCACAGCAGCGGAACTTAAGATACTGCAGTCTCTCTGCACAGGCTCTTTGTAGCTTGCAAAGATGGCTGGATAACAGTGGATGCCAATGA | 1185 | 48.19 | MVAEAEVVVCSKSLPVLEVPYFGKETHLVDEIESIDGGISVDPTLNRVRASESVCSSSQSDIKPMKKIPDSDVDTENGREFPSLRSGSFADIGPRRYMEDEHIRIDDLSSHLGSLFKFPKPSAFYGVFDGHGGPEAAAYIRKNVLRLFFEDVSFPQIPDIGEVLPEEIENCLRKAFLLADRALADDSSVSSSSGTTALTALVLGRHLMVANAGDCRAVLSRNGEAVDMSQDHRPVYSPEKQRVEELGGFVDGGYLNGVLSVSRALGDWDMKLPDGSPSPLIAEPECRQVVLTEEDEFLIIACDGIWDVMSSQQAVNVVRQGLQRHDDPERCARDLVLQALRLDSFDNLTVVVVCFSSFHPGNSPRPQQRNLRYCSLSAQALCSLQRWLDNSGCQ | 394 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 4141035 | 4142739 | - | ClG42_09g0048100.10 | Clacu09g0481 | 256789 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g0481 | 394 | Gene3D | - | 65 | 359 | IPR036457 | - | |
Clacu09g0481 | 394 | CDD | PP2Cc | 85 | 355 | IPR001932 | - | |
Clacu09g0481 | 394 | ProSiteProfiles | PPM-type phosphatase domain profile. | 85 | 355 | IPR001932 | - | |
Clacu09g0481 | 394 | SMART | PP2C_4 | 75 | 353 | IPR001932 | - | |
Clacu09g0481 | 394 | MobiDBLite | consensus disorder prediction | 59 | 79 | - | - | |
Clacu09g0481 | 394 | MobiDBLite | consensus disorder prediction | 65 | 79 | - | - | |
Clacu09g0481 | 394 | PANTHER | PROTEIN PHOSPHATASE 2C | 67 | 355 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Clacu09g0481 | 394 | Pfam | Protein phosphatase 2C | 95 | 347 | IPR001932 | - | |
Clacu09g0481 | 394 | ProSitePatterns | PPM-type phosphatase domain signature. | 124 | 132 | IPR000222 | GO:0043169(InterPro) | |
Clacu09g0481 | 394 | FunFam | Probable protein phosphatase 2C 22 | 70 | 358 | - | - | |
Clacu09g0481 | 394 | SMART | PP2C_SIG_2 | 100 | 355 | IPR001932 | - | |
Clacu09g0481 | 394 | SUPERFAMILY | PP2C-like | 80 | 357 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu05g1773 | Clacu-Chr5:26860648 | Clacu09g0481 | Clacu-Chr9:4141035 | 3.50E-35 | dispersed | |
Clacu09g0339 | Clacu-Chr9:2882172 | Clacu09g0481 | Clacu-Chr9:4141035 | 3.10E-33 | dispersed | |
Clacu09g0481 | Clacu-Chr9:4141035 | Clacu11g1596 | Clacu-Chr11:27124233 | 4.70E-34 | dispersed | |
Clacu02g1758 | Clacu-Chr2:31141035 | Clacu09g0481 | Clacu-Chr9:4141035 | 5.50E-72 | transposed | |
Clacu10g1623 | Clacu-Chr10:29581419 | Clacu09g0481 | Clacu-Chr9:4141035 | 6.40E-30 | transposed | |
Clacu11g2066 | Clacu-Chr11:31577997 | Clacu09g0481 | Clacu-Chr9:4141035 | 1.80E-89 | transposed | |
Clacu06g0411 | Clacu-Chr6:4916388 | Clacu09g0481 | Clacu-Chr9:4141035 | 2.40E-104 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g0481 | K14803 | - | csv:101216626 | 713.761 |