Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0549 ATGGCTACCGATTCTCATGCCCCTACTCCAAGAGGTCTTCTCTGTAATGCTGGGGCTGGTGCTGCTGCTGGAGTTCTTGCTGCTACGTTTGTTTGCCCTTTGGATGTTATCAAGACGAGATTTCAGGTTCATGGATTGCCAAACATCGGTAAAGGGAGTCTTATAGTTGGTAGTCTGCAACAAATTTTTCATAAGGAGGGGTTACGTGGAATGTATAGAGGTCTCGCACCTACTGTGCTTGCATTACTTCCTAACTGGGCTGTTTACTTCACAATATATGGGCAGCTTAAAAGCTTTCTTGGCTCTGATGGTGAAAATCGTCAGCTTTCAATAGGTGCTAATATGATGGCTGCTTCTGGTGCCGGGGCTGCTACAACTATTGCAACCAATCCTCTATGGGTAGTTAAGACCAGGCTACAGACACAGGGAATGAAATCTGGTGTGCTACCATATAGAAATACAGTGTCTGCCTTGAGGAGAATAGCCTCTGAAGAAGGCATTCGTGGATTGTACAGTGGGCTTGTACCTGCTTTGGCTGGTGTAAGTCACGTTGCGATCCAGTTTCCAACATATGAAAAAATAAAAAGTTATTTGGCTAGAAGAGACAATACGACAACGGACAAACTCACTGCACGCGATGTTGCGGTCGCCTCCTCTGTCTCCAAGATATTTGCTTCTACATTGACCTATCCACACGAGGTTGTACGATCCAGGCTTCAGGAACAAGGGTTTCACTCTGAGAAGCGTTATTCTGGGGTAGCCGATTGCGTAAAGAAAGTATTTCAACAAGATGGTCTCCCTGGTTTCTATAGAGGGTGTGCAACCAACCTTCTCAGGACGACGCCTGCTGCTGTCATCACATTTACAAGTTTTGAAATGATTCACCGTTTTCTTGTCAACTTATTTCCTCCCGATCCACATCCGCACACAATATGA 936 45.41 MATDSHAPTPRGLLCNAGAGAAAGVLAATFVCPLDVIKTRFQVHGLPNIGKGSLIVGSLQQIFHKEGLRGMYRGLAPTVLALLPNWAVYFTIYGQLKSFLGSDGENRQLSIGANMMAASGAGAATTIATNPLWVVKTRLQTQGMKSGVLPYRNTVSALRRIASEEGIRGLYSGLVPALAGVSHVAIQFPTYEKIKSYLARRDNTTTDKLTARDVAVASSVSKIFASTLTYPHEVVRSRLQEQGFHSEKRYSGVADCVKKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVNLFPPDPHPHTI 311
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 4685985 4689475 + ClG42_09g0054900.10 Clacu09g0549 256857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0549 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 99 IPR018108 -
Clacu09g0549 311 Gene3D Mitochondrial carrier domain 2 103 IPR023395 -
Clacu09g0549 311 Gene3D Mitochondrial carrier domain 104 301 IPR023395 -
Clacu09g0549 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 197 IPR018108 -
Clacu09g0549 311 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 301 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(PANTHER)|GO:0055085(InterPro)
Clacu09g0549 311 FunFam Nicotinamide adenine dinucleotide transporter 1, chloroplastic 1 106 - -
Clacu09g0549 311 FunFam NAD+ transporter 107 302 - -
Clacu09g0549 311 Pfam Mitochondrial carrier protein 15 102 IPR018108 -
Clacu09g0549 311 Pfam Mitochondrial carrier protein 108 200 IPR018108 -
Clacu09g0549 311 Pfam Mitochondrial carrier protein 214 300 IPR018108 -
Clacu09g0549 311 SUPERFAMILY Mitochondrial carrier 13 293 IPR023395 -
Clacu09g0549 311 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085(InterPro)
Clacu09g0549 311 PRINTS Mitochondrial carrier protein signature 74 94 IPR002067 GO:0055085(InterPro)
Clacu09g0549 311 PRINTS Mitochondrial carrier protein signature 218 240 IPR002067 GO:0055085(InterPro)
Clacu09g0549 311 PRINTS Mitochondrial carrier protein signature 124 142 IPR002067 GO:0055085(InterPro)
Clacu09g0549 311 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085(InterPro)
Clacu09g0549 311 ProSiteProfiles Solute carrier (Solcar) repeat profile. 209 297 IPR018108 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu01g0590 Clacu-Chr1:6093910 Clacu09g0549 Clacu-Chr9:4685985 1.70E-118 dispersed
Clacu01g2055 Clacu-Chr1:32340773 Clacu09g0549 Clacu-Chr9:4685985 2.30E-46 dispersed
Clacu05g2609 Clacu-Chr5:33880631 Clacu09g0549 Clacu-Chr9:4685985 2.50E-19 dispersed
Clacu06g0508 Clacu-Chr6:5850146 Clacu09g0549 Clacu-Chr9:4685985 4.50E-25 dispersed
Clacu09g0549 Clacu-Chr9:4685985 Clacu09g0639 Clacu-Chr9:5483747 2.30E-20 dispersed
Clacu09g0549 Clacu-Chr9:4685985 Clacu04g0824 Clacu-Chr4:22619829 1.10E-22 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0549 K15115 - csv:101204681 581.637