Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0599 ATGGCCGGTTCTATCAAGGTCCATGGAATTCCCACTTCCACAGCCACTGGTAGGGTTCTTGCTGCCCTTTACGAGAAGGGTCTTCAATTCGAGCTTGTGAATGTCAAATTACACGAAGGAGAACACAAGAGAGAGCCCTTCCTCTCGTTGAATCCCTTTGGTCAAGTTCCTGCGTTCCAAGATGGAGATCTGGCGCTTTTTGAATCTAGAGCGATCACGCAGTACATCTCGGGAAATTATGCTAGTAATGGAACTCAGTTGATTCCTCAAGATCCCAAGAAAGGGGCGCTCGTATTAACATGGATTGAGGTTGAGAGCCATCATTTTGACCCAGTAGCCATGAAATTGGTGTTCGAGCTGTGCTTGAAGCCAGTTTTTGGGTTGGGTGAGGCAGATCCTGCAGTAGTTGAGCAAAGTGAAGCCGAGTTAGGCAAAGTTCTTGATATCTACGAGAAAAGGCTGTCTGAATCCAAATACTTAGGAGGTGAGTCCTTCAGTTTGGCTGATCTGCACCATCTCCCTGTTCTGGGATACTTGTTGGCCACACAGTCCAAGAAACTCTTTGAATCCCGACCCCATGTCAATGCTTGGGTGGCTGATATCATAGCCAGGCCATCTTGGGCTAAAGTTCTTGAACTTCGCAAGTAA 648 47.22 MAGSIKVHGIPTSTATGRVLAALYEKGLQFELVNVKLHEGEHKREPFLSLNPFGQVPAFQDGDLALFESRAITQYISGNYASNGTQLIPQDPKKGALVLTWIEVESHHFDPVAMKLVFELCLKPVFGLGEADPAVVEQSEAELGKVLDIYEKRLSESKYLGGESFSLADLHHLPVLGYLLATQSKKLFESRPHVNAWVADIIARPSWAKVLELRK 215
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5120066 5120871 - ClG42_09g0059900.10 Clacu09g0599 256907
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0599 215 PANTHER GLUTATHIONE S-TRANSFERASE RHO 1 215 - GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER)
Clacu09g0599 215 Pfam Glutathione S-transferase, N-terminal domain 5 77 IPR004045 -
Clacu09g0599 215 SUPERFAMILY GST C-terminal domain-like 75 214 IPR036282 -
Clacu09g0599 215 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 215 IPR010987 -
Clacu09g0599 215 SFLD Main.5: Phi-like 4 213 - -
Clacu09g0599 215 CDD GST_N_Phi 5 77 - -
Clacu09g0599 215 FunFam Glutathione S-transferase F2 89 211 - -
Clacu09g0599 215 Gene3D - 91 215 - -
Clacu09g0599 215 Pfam Glutathione S-transferase, C-terminal domain 111 205 IPR004046 -
Clacu09g0599 215 Gene3D Glutaredoxin 3 88 - -
Clacu09g0599 215 SFLD Glutathione Transferase (cytosolic) 4 213 IPR040079 -
Clacu09g0599 215 FunFam Glutathione S-transferase F2 4 88 - -
Clacu09g0599 215 SUPERFAMILY Thioredoxin-like 4 89 IPR036249 -
Clacu09g0599 215 CDD GST_C_Phi 93 211 IPR034347 -
Clacu09g0599 215 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 84 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g0599 Clacu-Chr9:5120066 Clacu09g0601 Clacu-Chr9:5132466 5.60E-82 dispersed
Clacu09g0599 Clacu-Chr9:5120066 Clacu09g0600 Clacu-Chr9:5130537 3.00E-91 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0599 K00799 - csv:101212291 411.379