Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g0601 | ATGGCGAGCATCAAAGTCCATGGAAGCCCCATTTCCACTGCCACAGCCAGAGTTCTCGCTTGTCTTTATGAGAAAGATCTCGATTACGAGTTTGTTCTTCTGGATATGAAAAATAACGAGCACAAGAAACACCCCTTTCTCTCCATTAACCCGTTTGGTCAAGTTCCTGGGTTTCAAGATGGGGATCTCACCATTTTCGAATCAAGGGCCATTACTCAATACTTGGCCAACGCCTACGCCAGCAAGGGAACCCAATTGATCTCCAACGACCCGAAGAAAGCGGCGATCATATCAACGTGGATTGAAGTGGAGGGCCACCATTACGACCCACCGGCGGTTGCTCTGTCGTTTGAGCATCTAGTCAAGCCGCTGTTTGGACTCGGTGAAACTGATCCCGCAGCGGTAGCGGAGAACGAAGCCAAGCTGGGGAAAGTTCTTGACATCTACGAGAATCAGCTTAGCAGAAACAAGTTCTTGGCTGGGGATGAGTTCAGTTTGGCGGATCTGCATCATATACCCAATGTGAGCTACTTGTTCATGACGCCGTCGAAGAAGCTGTTCGAGTCACGGCCACGTGTCAACGCTTGGGTGGCCGAGATCACTGCAAGGCCTTCGTGGGCTAAAGTTGTTGCCTTGCGCAACCAGAGTTAA | 651 | 50.38 | MASIKVHGSPISTATARVLACLYEKDLDYEFVLLDMKNNEHKKHPFLSINPFGQVPGFQDGDLTIFESRAITQYLANAYASKGTQLISNDPKKAAIISTWIEVEGHHYDPPAVALSFEHLVKPLFGLGETDPAAVAENEAKLGKVLDIYENQLSRNKFLAGDEFSLADLHHIPNVSYLFMTPSKKLFESRPRVNAWVAEITARPSWAKVVALRNQS | 216 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 5132466 | 5133952 | - | ClG42_09g0060100.10 | Clacu09g0601 | 256909 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g0601 | 216 | Gene3D | - | 90 | 214 | - | - | |
Clacu09g0601 | 216 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
Clacu09g0601 | 216 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 2 | 83 | IPR004045 | - | |
Clacu09g0601 | 216 | FunFam | Glutathione S-transferase F2 | 88 | 210 | - | - | |
Clacu09g0601 | 216 | CDD | GST_C_Phi | 92 | 210 | IPR034347 | - | |
Clacu09g0601 | 216 | Pfam | Glutathione S-transferase, C-terminal domain | 129 | 204 | IPR004046 | - | |
Clacu09g0601 | 216 | PANTHER | GLUTATHIONE S-TRANSFERASE RHO | 1 | 215 | - | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)|GO:0043295(PANTHER) | |
Clacu09g0601 | 216 | Pfam | Glutathione S-transferase, N-terminal domain | 5 | 77 | IPR004045 | - | |
Clacu09g0601 | 216 | CDD | GST_N_Phi | 4 | 76 | - | - | |
Clacu09g0601 | 216 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 90 | 216 | IPR010987 | - | |
Clacu09g0601 | 216 | SUPERFAMILY | Thioredoxin-like | 1 | 82 | IPR036249 | - | |
Clacu09g0601 | 216 | FunFam | Glutathione S-transferase F2 | 3 | 87 | - | - | |
Clacu09g0601 | 216 | SUPERFAMILY | GST C-terminal domain-like | 74 | 212 | IPR036282 | - | |
Clacu09g0601 | 216 | SFLD | Glutathione Transferase (cytosolic) | 1 | 212 | IPR040079 | - | |
Clacu09g0601 | 216 | SFLD | Main.5: Phi-like | 1 | 212 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu08g1561 | Clacu-Chr8:25444325 | Clacu09g0601 | Clacu-Chr9:5132466 | 8.40E-49 | dispersed | |
Clacu09g0599 | Clacu-Chr9:5120066 | Clacu09g0601 | Clacu-Chr9:5132466 | 5.60E-82 | dispersed | |
Clacu09g0600 | Clacu-Chr9:5130537 | Clacu09g0601 | Clacu-Chr9:5132466 | 1.10E-77 | tandem | |
Clacu09g0601 | Clacu-Chr9:5132466 | Clacu09g0602 | Clacu-Chr9:5135894 | 5.70E-50 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g0601 | K00799 | - | csv:101212771 | 412.92 |