Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0605 ATGGCCGGAGAAGTAGAAATAGACGATCTGAACAACAGTCCCAAAATGCTGTCACGGCCGAAACTACGGCGTTTCGACTCATTAGACATTGAATCGAACAAGCTGGACGGCGGCCGTGGGCACCGCGCCGCCGCGGGGTGGTTGGTGACTCTGCAACTGGCGTTTCAGAGCATCGGGATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTTTTTCAAAGCACTTTTCCGGCAGGGATAAAACATAAGGACGACGTTTTGGGAGTTCTATCGTTGATTTATTATACGCTCACTTTGATTCCTCTCTTTAAGTACGTCTTCATCGTCTTGCAGGCTAACGACAATGGCGACGGAGGGACATTTGCATTGTATTCTCTACTTTGCCGATATGCAAGAATAGGGTTAATACCTAGCCAACAAGTTGAGGATCGGGAGGTTTCTAATTACCGATTAGACATTCCCAACAACCGTGTGCGGCGGGCGTCGTGGTTGAAGTCTCAACTCGAGAACCGCCGCTCTGCCAAGCTTTTCTTGCTCTTTGCCACCATGCTCGGCACCTCCATGGTCATCGGTGACGGGGTTCTCACTCCTTGCATTTCTGTTTTGTCAGCTGTTGGAGGCATTAAGAGAGCTAGACCTTCAATAACACAGGATACAATAGTGGGGATATCAGCTGGTATATTGGTGTGTCTTTTCATGGCTCAAAGATTTGGAACAGACAAAGTTGGATACACATTTGCTCCAATTATATGCATTTGGTTCAGTTTCATAGCTGCCATTGGTTTCTACAATTTTGTCAAGTTTGATCCTTCAGTCATCAAAGCTTTAAACCCTAAATATATCATTCACTATTTTATAAGGAACAAAACCCAAGCTTGGATTTCCCTTGGTGGCATTGTTCTCTCCATAACAGGGACAGAAGCATTATTTGCTGATGTTGGGCATTTCAGTGTGAAATCAATTCAAATAAGCATGTGTGCTGTTACCTATCCAGCTTTATTGCTTGCTTACACAGGACAAGCCTCTTACCTTCACACACACATTAATGAAGTTGGAGACACCTTCTTCAAATCCATTCCAGAACGTTTATACTGGCCAATGTTTGTGGTGGCCGTATTATCAGCCATTATTGCAAGCCAAGCTATGATTTCAGGAACATTCTCTATCATTCAACAATCCCTTTCACTTGGGTGTTTCCCAAGAGTCAAAGTTGTTCATACTTCTTCCAAGTATGAAGGCCAAGTTTATATCCCTGAGGTTAACTTTCTACTCATGCTTGCTTGTTTGGTTGTCACTCTTGCCTTCAAGGAGACTGACAAGATAGGAAATGCCTATGGCATAGCTGTTGTGTTTGTGATGACTCTCACATCCTCATTTTTAGTATTAATCATGATCATGATATGGAAAACCCACATGATTTTGATAATCATTTACATTCTTGTCATTGGGTCAGTGGAACTTCTTTATTTGAGTTCAGTTCTTTACAAGTTTGATCAAGGAGGTTACCTTCCACTTGCTTTTGCCTTTGCACTTATGGCCATAATGTATACTTGGAACACTGTCTATAGAAGAAAATACTATTATGAGCTTGACAACAAGATCTCTTCTCATCAACTCAAGGACATTGTATCAAATGCCAATCCTTGTAGAGTTCAAGGCCTTGCCATTTTCTACTCTGAGCTTGTACAAGGCATTCCTCCCATTTTCAAGCTTTACATGGCCAACGTCCCCGTCCTTCATCGAGTCCTCGTCTTCGTCTCGATCAAGTCGTTGCCTATTAGCAAGGTCCCATTAGACGAGCGGTTTCTCTTTTGCAGAGTTGAGCCGAGAGAGCTTAATATCTTTCGATGCGTCGTGCGATACGGGTACACAGATGATCGAAACGAGCGAGAGTTGTTCGAGAGGAGTTTGGTGGAGAGATTGAAAGGGTTCTTAAGGGATGATGTTAGGGTTAATACCAAAGTGGAGGAGGAGAAAGATCATGAGAATGGGATAATAATTGAGGAAGAGAAACACAAGATTAGAGAAGTGGAATTGGAGGATGACATTGAGGAAGTTGATAAAGCTTGGGAAAATGGTGTGGTTCATTTGGTTGGAGAAAGTGAAGTTGTTGCTAAGGAAGGATCTAATATTTGGAAGAGGGTTTTGATTGATTATGCTTACAATTTCTTGAAGAACAATTTGAGACAAAGTGAGAGAGTCTTTGATATTCCTCACAAACGTTTGCTCAAAGTGGGAATGACATATGAACTTTAA 2259 42.59 MAGEVEIDDLNNSPKMLSRPKLRRFDSLDIESNKLDGGRGHRAAAGWLVTLQLAFQSIGIVYGDIGTSPLYVFQSTFPAGIKHKDDVLGVLSLIYYTLTLIPLFKYVFIVLQANDNGDGGTFALYSLLCRYARIGLIPSQQVEDREVSNYRLDIPNNRVRRASWLKSQLENRRSAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKRARPSITQDTIVGISAGILVCLFMAQRFGTDKVGYTFAPIICIWFSFIAAIGFYNFVKFDPSVIKALNPKYIIHYFIRNKTQAWISLGGIVLSITGTEALFADVGHFSVKSIQISMCAVTYPALLLAYTGQASYLHTHINEVGDTFFKSIPERLYWPMFVVAVLSAIIASQAMISGTFSIIQQSLSLGCFPRVKVVHTSSKYEGQVYIPEVNFLLMLACLVVTLAFKETDKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHMILIIIYILVIGSVELLYLSSVLYKFDQGGYLPLAFAFALMAIMYTWNTVYRRKYYYELDNKISSHQLKDIVSNANPCRVQGLAIFYSELVQGIPPIFKLYMANVPVLHRVLVFVSIKSLPISKVPLDERFLFCRVEPRELNIFRCVVRYGYTDDRNERELFERSLVERLKGFLRDDVRVNTKVEEEKDHENGIIIEEEKHKIREVELEDDIEEVDKAWENGVVHLVGESEVVAKEGSNIWKRVLIDYAYNFLKNNLRQSERVFDIPHKRLLKVGMTYEL 752
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5161440 5173537 + ClG42_09g0060500.10 Clacu09g0605 256913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0605 752 NCBIfam potassium uptake protein 53 751 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
Clacu09g0605 752 Pfam K+ potassium transporter integral membrane domain 53 539 IPR053951 -
Clacu09g0605 752 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 43 751 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Clacu09g0605 752 Pfam K+ potassium transporter C-terminal domain 554 752 IPR053952 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g0605 Clacu-Chr9:5161440 Clacu11g0182 Clacu-Chr11:1531686 3.60E-184 dispersed
Clacu09g0605 Clacu-Chr9:5161440 Clacu09g0606 Clacu-Chr9:5179953 6.80E-292 tandem
Clacu10g1060 Clacu-Chr10:22538122 Clacu09g0605 Clacu-Chr9:5161440 2.30E-287 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0605 K03549 - csv:101204520 1280.39