Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0653 ATGGCTGGGAGTAATGAAGTCAACCTTAATGAATCTAAGAGAGTTGTTCCACTGAATACATGGGTGCTTATCTCCAATTTCAAGCTTGCCTACACCATCCTCCGCCGTGCCGATGGAACCTTCAACCGTGAGTTAGCAGAGTATCTCGAGCGTAAAGTTCCGGCCAATGTGATTCCGGTGGATGGGGTTTTCTCATTTGATCATGTTGATCGAGCATCTGGCCTTCTCAACCGAGTTTACCAGCTGGCCCCAGAGAATGAAGCTCGATGGGGCATCATTGATCTGGAGAAGCCTCTAAGCACGTCGAAAGTTGTCCCTGTCATTCTGTTTTTTCATGGTGGAAGTTTTGCTCATTCATCAGCCAACAGTGCTATCTATGACACTTTTTGCCGCCGCATCGTAAGTGTATGTAAGGCGGTTGTAGTCTCGGTTAACTACCGTCGGTCACCCGAACACCGATATCCATGTGCGTATGAGGATGGCTGGACTGCACTCAAATGGGTTAAATCAAAGACATGGTTGCAAAGTGGGAAGGATTGTAAGGTTCATGTGTATTTGGCTGGAGACAGTTCTGGTGGCAACATAGCTCATCATGTTGCAGTGAGGGCAGCTGAAGAAGACATCGAGGTACTCGGCAACATCCTTCTTCACCCGATGTTTGGGGGTGAAAAGAGAACTGAATCGGAGAAAAAACTCGATGGTAAATACTTCGTAAGCATTCAAGACCGAGATTGGTACTGGAGAGCTTTTCTCCCTGAAGGAGAAGACAGAGATCATCCAGCTTGTAACATTTTTGGCCCCAGAGCCAAAAGCCTTGTAGGACTTGACTTCCCAAAAAGTTTAGTCGTGGTTGCCGGTTTGGATCTGATGCAAGATTGGCAACTCGCTTATGTGCAAGGCCTAAAAGACTCTGGTCACGACGTGAAACTTCTCTTCCTCGAGCAGGCAACAATTGGGTTCTACTTCTTGCCAAACAATGAACATTTCTACTGTCTAATGGAAGAGATAAGCAACTTCATCAACCCTTAA 1029 46.45 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYTILRRADGTFNRELAEYLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLAPENEARWGIIDLEKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRIVSVCKAVVVSVNYRRSPEHRYPCAYEDGWTALKWVKSKTWLQSGKDCKVHVYLAGDSSGGNIAHHVAVRAAEEDIEVLGNILLHPMFGGEKRTESEKKLDGKYFVSIQDRDWYWRAFLPEGEDRDHPACNIFGPRAKSLVGLDFPKSLVVVAGLDLMQDWQLAYVQGLKDSGHDVKLLFLEQATIGFYFLPNNEHFYCLMEEISNFINP 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 5626290 5627927 + ClG42_09g0065300.10 Clacu09g0653 256961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0653 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787(InterPro)
Clacu09g0653 342 PANTHER ARYLACETAMIDE DEACETYLASE 37 326 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Clacu09g0653 342 FunFam Gibberellin receptor GID1 1 342 - -
Clacu09g0653 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
Clacu09g0653 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Clacu09g0653 342 SUPERFAMILY alpha/beta-Hydrolases 100 341 IPR029058 -
Clacu09g0653 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu03g1701 Clacu-Chr3:30759292 Clacu09g0653 Clacu-Chr9:5626290 2.10E-150 dispersed
Clacu09g0653 Clacu-Chr9:5626290 Clacu09g0774 Clacu-Chr9:6951371 3.10E-58 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0653 K14493 - csv:101219912 678.707