Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0726 ATGGGTAACGCCGATTACGTGTACCCATCATCCACGGCAGCAGGGGATGGCGGCGAGTGCATGCACAGGGCGGCGATTCCGCCGGCGCAGCCGTTCGTGAAGTCGCTGAAGAACGGTCTGAAGGAGACATTCTTCCCGGACGACCCGCTCCGGCAGTTCAAGAATCAGCCGGCGGGAAGGAAGATAATTCTGGGTTTGCAGTACTTTTTTCCTGTGGTGGAATGGGGGCCGCGCTATAATTTAGGGCTTCTGAAATCGGATCTTATCTCTGGAATCACCATTGCTAGCCTCGCCATTCCTCAGGGCATTAGCTACGCAAAGCTTGCTAACTTGCCTCCTATACTCGGCCTCTATTCGAGTTTTATTCCGCCGTTAATTTATGCGATGATGGGAAGCTCAAAGGACTTGGCCGTCGGAACAGTGGCAGTGGCGTCACTTCTGATTAGCTCAATGTTAGGAGCAGAGGTTAACCCTGTTCAAAACCCCACTCTTTATCTCCATCTTGCTTTCACCGCGACTTTCTTCGCCGGAGTCTTCCAAGCCTCCTTAGGGCTCTTAAGGCTAGGGTTCATTGTTGATTTCTTGTCACATGCAACCATTGTTGGGTTCATGGCGGGCGCTGCCACGGTGGTGTGCCTACAGCAACTCAAAGGCATCCTAGGGCTAACCCATTTCACCCACGCGACCGACCTCGTTTCCGTCCTCCGCTCCGTCTTCTCCCAAGTTCACCAGTGGAGATGGGAAAGTGGGGTCTTGGGATGCTGTTTTCTCTTCTTCCTCCTCATCACTAGATACTTTAGCAAGAAAAAGCCAAAGTTCTTCTGGATATCAGCAATGGCACCTTTGACCTCAGTGATTTTAGGAAGCCTTCTAGTGTTTCTTACTCACGCTGAAAAACACGGCGTCGAAGTGATTGGAGAATTGAAGAAAGGGCTAAATCCAGTGTCAATAACAAATTTGGTGTTTGTGTCACCTTATCTTTCAACTGCCATTAAAACTGGCATCATCACTGGCGTCATAGCTCTTGCGGAAGGAATAGCAGTTGGAAGAAGCTTTGCGATGTTCAAGCATTACAACATCGATGGCAACAAAGAAATGGTAGCCATTGGCACAATGAACATGGTCGGCTCTTGCTTCTCTTGCTATCTCACAACAGGGCCCTTTTCGCGATCGGCTGTGAATTACAATGCAGGATGCAAAACCGCGGTATCAAACGTGGTAATGGCGATTGCAGTGATGTTGACATTGTTATTCTTGACTCCTCTCTTCCACTACACTCCTCTGGTGGTGCTTTCTTCCATCATCATTTCCGCCATGCTTGGCCTCATTGATTACGAAGCTGCTATTCACTTGTGGAAGGTTGATAAATTTGATTTCCTTGTCTGCATTGGCGCTTATGCTGGTGTTGTCTTTGCCAGTGTTGAAATTGGCTTGGTCATTGCGGTGGTGATATCTCTGCTTAGACTACTTTTGTTCGTTGCGAGGCCGAGGACGCTTGTGCTTGGAAACCTTCCCAATTCCACAGTTTACAGGAACGTAGAGCAGTACCCGAATGCCGATCATGTTCCTGGCATTCTCATACTTGAGATTGACGCTCCCATTTACTTTGCTAATTCCAGCTACTTGAGAGAAAGGATTATAAGGTGGGTTGATGAAGAGGAAGATAGGATAAAAGCTTCGGGTGAAAGTACCTTACAATATGTCGTATTGGACATGAGTGCTGTTGGCAACATTGATACAAGTGGAATAAGTATGTTTGAAGAGATGAAGAAGATTTTAGAAAGAAGGGGATTGAAGATAGTTTTGGCCAACCCTGGAGCTGAGGTAATGAAGAAGCTGGACAAGGGCAAGTTCATTGAGACCCTTGGACACGAATGGATCTATCTAACAGTTGCCGAAGCTGTAGCGGCCTGCAACTATATGCTTCACTCTTGCAAACCGAACCCTGTAACTGATGAGAAAGCTGAGCCATGGAACAATGTGTAA 1986 47.63 MGNADYVYPSSTAAGDGGECMHRAAIPPAQPFVKSLKNGLKETFFPDDPLRQFKNQPAGRKIILGLQYFFPVVEWGPRYNLGLLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVASLLISSMLGAEVNPVQNPTLYLHLAFTATFFAGVFQASLGLLRLGFIVDFLSHATIVGFMAGAATVVCLQQLKGILGLTHFTHATDLVSVLRSVFSQVHQWRWESGVLGCCFLFFLLITRYFSKKKPKFFWISAMAPLTSVILGSLLVFLTHAEKHGVEVIGELKKGLNPVSITNLVFVSPYLSTAIKTGIITGVIALAEGIAVGRSFAMFKHYNIDGNKEMVAIGTMNMVGSCFSCYLTTGPFSRSAVNYNAGCKTAVSNVVMAIAVMLTLLFLTPLFHYTPLVVLSSIIISAMLGLIDYEAAIHLWKVDKFDFLVCIGAYAGVVFASVEIGLVIAVVISLLRLLLFVARPRTLVLGNLPNSTVYRNVEQYPNADHVPGILILEIDAPIYFANSSYLRERIIRWVDEEEDRIKASGESTLQYVVLDMSAVGNIDTSGISMFEEMKKILERRGLKIVLANPGAEVMKKLDKGKFIETLGHEWIYLTVAEAVAACNYMLHSCKPNPVTDEKAEPWNNV 661
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 6321830 6329790 - ClG42_09g0072600.10 Clacu09g0726 257034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0726 661 Gene3D STAS domain 495 641 IPR036513 -
Clacu09g0726 661 CDD STAS_SulP_like_sulfate_transporter 516 631 - -
Clacu09g0726 661 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Clacu09g0726 661 Pfam STAS domain 516 634 IPR002645 -
Clacu09g0726 661 SUPERFAMILY SpoIIaa-like 517 639 IPR036513 -
Clacu09g0726 661 ProSiteProfiles STAS domain profile. 515 638 IPR002645 -
Clacu09g0726 661 PANTHER SULFATE TRANSPORTER 61 639 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu09g0726 661 Pfam Sulfate permease family 84 464 IPR011547 GO:0016020(InterPro)
Clacu09g0726 661 NCBIfam sulfate permease 71 634 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu09g0726 661 FunFam Sulfate transporter 31 495 641 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu06g1097 Clacu-Chr6:20609162 Clacu09g0726 Clacu-Chr9:6321830 6.20E-201 dispersed
Clacu06g1098 Clacu-Chr6:20639366 Clacu09g0726 Clacu-Chr9:6321830 2.00E-199 dispersed
Clacu09g0220 Clacu-Chr9:2009749 Clacu09g0726 Clacu-Chr9:6321830 2.70E-215 dispersed
Clacu09g0726 Clacu-Chr9:6321830 Clacu11g0272 Clacu-Chr11:2458052 1.10E-208 dispersed
Clacu05g0562 Clacu-Chr5:4732977 Clacu09g0726 Clacu-Chr9:6321830 7.70E-284 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0726 K17471 - csv:101222260 1242.25