Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0799 ATGGCGGAACTGGAGAATTCAAGATTACTACCGCCACAAACCATGCAACACGAGAAACGAAGCTCAAACACAGAGACAGGGAAAACCAAACTTCTGGAATCAAATGGTTATGTTCGCCTAGCTGCATTTCGGAAATTCATATTAGGACTCGGAATGGACAAGCCTGCCAATATCGTTGTCGGTTCTCAAATATGGGTGGGAGATATAGATTCTGTTTGGATTGATGGACTCGTATTGAACATCACTGGGGAAGATGCTGAGATTCAGACTAGTGATGGGAGGCAGGTGGTTGTAAAAATGTCAAATCTATATCCAAGGGATGCAGAAGCTCCTACTACTGGAATTGACGATATGACTAGAATGTCATATTTGAATGAGCCCGGGTTGCTGCATAATTTGGCTATCAGATATGCAATAAATGAAATCTATACTTATACTGGAAACATTCTTATTGCCATCAACCCATTCCAAAGTATTTCAAGTCTGTATGATGCCCATGTGATGGAGCAGTACAAGGGGGCACCAATTGGGGAGCTGAAGCCTCATGTTTTTGCAATTGCTGATGTTGCATATAGGGCTATGATAAATTATGGGAAAAGCAACTCCATTCTGGTAAGTGGTGAAAGTGGGGCTGGTAAGACCGAAACCACCAAAATGCTTATGTGTTACCTTGCATTTTTGGGCGGCCATGCTGCATCTGAAGGACGGACTGTTGAACAACAAGTTTTAGAATCAAATCCAGTTCTTGAAGCTTTTGGCAATGCAAAAACAGTAAGAAACAATAATTCAAGCCGTTTTGGGAAATTCGTTGAGATCCAATTTGACAAGAAGGGAAGAATATCAGGAGCTGCCATCAGAACTTATCTTCTTGAGAGATCACGGGTTTGCCAAATATCAGACCCTGAGCGCAACTATCATTGCTTTTATCTTCTCTGTGCAGCTCCACCTCAGGAGAGAGAGAGATATAAGCTAGGAAATCCAAAATCATTTCACTATCTAAACCAATCAAATTGTTATGAACTGGCTGGTGTGAATGATGCTCATGATTATCTTGCTACAAAGAGAGCCATGGATATTGTTGGAATAGGTGAACAAGAGCAGGATGCAATTTTCAGAGTTGTGGCTGCAATTCTCCATCTTGGTAATATTGACTTTGCAAAAGGAGAAGAGTCTGATTCATCATTTGTGAAAGATGAAGAATCAAAATTTCATCTTCACATGACAGCAGAGCTTCTCATGTGTGATCCCCTTGCATTAGAAGATGCTCTTTGCAAGCGCATGATGATTACACCAGAGGACGTCATCAAGAGAAGTCTTGATCCACTTGGTGCAACAGTTAGCAGGGATGGATTAGCCAAGACAATATACTCTCGTTTGTTTGACTGGTTGGTAGATAAAATCAATTTTTCCATCGGACAAGATCCTGGCTCAAAATATCTGATCGGAGTACTTGATATTTATGGTTTTGAGAGCTTTCAAACAAATAGTTTTGAGCAATTCTGCATCAATTACACAAATGAAAAGCTGCAGCAACATTTCAACCAGCACGTCTTCAAGATGGAGCAAGAAGAATATGTAAAAGAGGAAATTGATTGGAGCTACATAGAGTTTGTTGATAATCAAGATGTCCTCGATCTCATCGAGAAGAAACCAGGTGGAATCATTGCTCTTCTTGATGAAGCTTGCATGTTCCCGAAATCAAATCATGAAACATTTTCACAAAAGCTATATCAGACCTTCAAAAATCATAAACGCTTCACCAAGCCAAAATTGGCCCGCTCAGATTTTACGATTGTTCATTATGCTGGAGATGTTCTATATCAGTCAGATCAGTTTCTAGACAAAAATAAAGATTATGTTGTCCCTGAACATCAAGATTTGTTAAGTGCTTCAAAATGTTCTTTTGTTGCTGGCCTCTTCTCTCCTCATCCTGAGGAGACGGCCAAATCATCAAAGTTTTCTTCAATTGGCTCTCGTTTTAAGTTACAACTACAGCAGTTGATGGAAACGTTAAATTCAACCGAACCCCATTATATAAGATGTGTGAAGCCCAATACTGTCCTGCAACCTGCCATCTTTGAGAATGCTACTGTTATGCAACAATTACGTTCTGGAGGTGTTTTGGAGGCAATTAGAATCAAATGTGCAGGATACCCTACTCATAGAACATTTTCCGAATTTTTATCTCGATTTGGAATTCTTGCACCCGAGGTATTGGAAGGGGACTATGAAGAGAAGGCAGCGTGCGAAAAGATTCTAGAGAAGATGGGACTTAAAGGTTATCTGATAGGGAAATCAAAAATTTTCCTAAGAGGTAATTTAATGGCCGAACTAGATGCACAAAGAACAGGAATATATAGTGCTGCTGCTATACTTATACAGAAGCATTTCAGAGCTCGAAATGATTGTAAAAAGTACATTGCCATGCGAAGAGCCTGCATTCGTCTACAATCATATTGGAGAGGTGTTCTTGCCCGTGAGTCATATGAAATTAGGAGAAGGGAAGCAGCTGCCGTCAAAATTCAAAAGAATGTTCGTGCATACCTTGCCAGGAGCCGTCATATTAAAATGAGGATCTCTACAGTTTTTCTTCAGGCTGGTATGCGTGCAATGGTTGCTCGGAGTGAATACAGAAACAGGAGGCAGGTTAAGGCTGCAAAAGTTATTCAATCTTATTGGCGTCAGTATAGAACCTCGTCGAGGTATAAGACGGTTAAAAAATCATCAACCAATTCACAATGCGGATTGTACTCAAAAACTTCTGGTGAAGGTCTTAAGAAGCAAAGGATGGCTAACTTGGAAGAAACAAAGGAGGATCTGGTTTTGCCTGCGTTGCTCAACAGCAGTACAGACACCATTGATGAAACAATTGAAATGATTGCCATGGAAAGCCGTGTTTCTCCACAAGAAATAGAAGAAGCATACTTTATTATTAAAGAGCCCGGTAGTCCAGTTGAAGGTGCAGATAAGGTGGTCACTCTCAGAGCAGAAGTGGCTAATCTAAAGGCCAAGTTGCAGGCTGAAAGGCAAAGAGCTAATGAGTATGAAAGGAAGTATGCTGTAATGCAGAAAGCAAATGAGGAAGGACGTAGAAAACTAAAAAAAACCGAAAGGAAGGTGCATCAACTTCAGGACTACATAAACAGGATGATACATTGCATGTCAAACCAAATCTCGGAGATGAAAATGATCGTGGGTACTTCTAGATCGGATGCATCTAGTTCTTCTCGGAATGAGGTTCTGACGGATGCCACATCCAGTTGCTCTGATTCATCATCAGAAGACTTCACCTTTCCTGTTCCAAGTCCATCTATACCAACTTTCTCTTCATTCGGTACCAATACTTTTCAGCTGATTGTGCAGGATATTTCAGCTGCAGAAATTCCAGGATCTGACAGTGACAGGGAAGGGGGATTTTCTGACTACTTCTAA 3432 40.65 MAELENSRLLPPQTMQHEKRSSNTETGKTKLLESNGYVRLAAFRKFILGLGMDKPANIVVGSQIWVGDIDSVWIDGLVLNITGEDAEIQTSDGRQVVVKMSNLYPRDAEAPTTGIDDMTRMSYLNEPGLLHNLAIRYAINEIYTYTGNILIAINPFQSISSLYDAHVMEQYKGAPIGELKPHVFAIADVAYRAMINYGKSNSILVSGESGAGKTETTKMLMCYLAFLGGHAASEGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKKGRISGAAIRTYLLERSRVCQISDPERNYHCFYLLCAAPPQERERYKLGNPKSFHYLNQSNCYELAGVNDAHDYLATKRAMDIVGIGEQEQDAIFRVVAAILHLGNIDFAKGEESDSSFVKDEESKFHLHMTAELLMCDPLALEDALCKRMMITPEDVIKRSLDPLGATVSRDGLAKTIYSRLFDWLVDKINFSIGQDPGSKYLIGVLDIYGFESFQTNSFEQFCINYTNEKLQQHFNQHVFKMEQEEYVKEEIDWSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKSNHETFSQKLYQTFKNHKRFTKPKLARSDFTIVHYAGDVLYQSDQFLDKNKDYVVPEHQDLLSASKCSFVAGLFSPHPEETAKSSKFSSIGSRFKLQLQQLMETLNSTEPHYIRCVKPNTVLQPAIFENATVMQQLRSGGVLEAIRIKCAGYPTHRTFSEFLSRFGILAPEVLEGDYEEKAACEKILEKMGLKGYLIGKSKIFLRGNLMAELDAQRTGIYSAAAILIQKHFRARNDCKKYIAMRRACIRLQSYWRGVLARESYEIRRREAAAVKIQKNVRAYLARSRHIKMRISTVFLQAGMRAMVARSEYRNRRQVKAAKVIQSYWRQYRTSSRYKTVKKSSTNSQCGLYSKTSGEGLKKQRMANLEETKEDLVLPALLNSSTDTIDETIEMIAMESRVSPQEIEEAYFIIKEPGSPVEGADKVVTLRAEVANLKAKLQAERQRANEYERKYAVMQKANEEGRRKLKKTERKVHQLQDYINRMIHCMSNQISEMKMIVGTSRSDASSSSRNEVLTDATSSCSDSSSEDFTFPVPSPSIPTFSSFGTNTFQLIVQDISAAEIPGSDSDREGGFSDYF 1143
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 7211269 7231617 - ClG42_09g0079900.10 Clacu09g0799 257107
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0799 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 87 836 IPR027417 -
Clacu09g0799 1143 SMART MYSc_2a 107 784 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 MobiDBLite consensus disorder prediction 1069 1095 - -
Clacu09g0799 1143 PRINTS Myosin heavy chain signature 143 162 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 PRINTS Myosin heavy chain signature 480 508 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 PRINTS Myosin heavy chain signature 247 274 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 PRINTS Myosin heavy chain signature 533 561 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 PRINTS Myosin heavy chain signature 200 225 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 FunFam Class V myosin 490 631 - -
Clacu09g0799 1143 Gene3D Kinesin motor domain 116 713 IPR036961 -
Clacu09g0799 1143 ProSiteProfiles IQ motif profile. 809 838 - -
Clacu09g0799 1143 Gene3D - 786 835 - -
Clacu09g0799 1143 Gene3D - 836 887 - -
Clacu09g0799 1143 ProSiteProfiles IQ motif profile. 834 861 - -
Clacu09g0799 1143 Gene3D - 303 361 - -
Clacu09g0799 1143 FunFam Myosin 2 363 476 - -
Clacu09g0799 1143 ProSiteProfiles Myosin motor domain profile. 113 783 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 FunFam Myosin heavy chain 303 358 - -
Clacu09g0799 1143 ProSiteProfiles IQ motif profile. 857 886 - -
Clacu09g0799 1143 Pfam IQ calmodulin-binding motif 884 903 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 Pfam IQ calmodulin-binding motif 836 854 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 Pfam IQ calmodulin-binding motif 810 829 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 Gene3D - 717 784 - -
Clacu09g0799 1143 Coils Coil 991 1046 - -
Clacu09g0799 1143 ProSiteProfiles IQ motif profile. 882 911 - -
Clacu09g0799 1143 SMART iq_5 856 878 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 SMART iq_5 881 903 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 SMART iq_5 833 855 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 SMART iq_5 785 807 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 SMART iq_5 808 830 IPR000048 GO:0005515(InterPro)
Clacu09g0799 1143 Pfam Myosin head (motor domain) 116 771 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 CDD MYSc_Myo11 127 771 IPR036018 -
Clacu09g0799 1143 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 59 108 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Clacu09g0799 1143 PANTHER MYOSIN 74 1074 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Clacu09g0799 1143 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 835 908 IPR027417 -
Clacu09g0799 1143 Gene3D - 490 674 - -
Clacu09g0799 1143 MobiDBLite consensus disorder prediction 1 28 - -
Clacu09g0799 1143 Gene3D Myosin VI head, motor domain, U50 subdomain 363 652 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g0359 Clacu-Chr9:3107248 Clacu09g0799 Clacu-Chr9:7211269 0.00E+00 dispersed
Clacu09g0799 Clacu-Chr9:7211269 Clacu11g2033 Clacu-Chr11:31301357 2.50E-136 dispersed
Clacu09g0799 Clacu-Chr9:7211269 Clacu06g0134 Clacu-Chr6:1483935 0.00E+00 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0799 K10357 - csv:101220626 2017.28