Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g0840 ATGTCTCGAACACCGAATTATGAGTTCCAAGAATGGTGGAACAAGCAGAGAGAAAGGAACCATGATGAACACTTGCTGGAAAAGTCCGATAACTTATCGACCTCACCTGCATTTCTCTCTGTTGAGATCCGGAGTTCTGGGAGCCCTGGAGATCGGATGGCCGATAAGGACCGGGCGAGGACCAGGAGTGCCCGTCAGATTTCTTGGGTTTGGCTGTTGAAATTCCAGCAGATTGCTGGTTCATTGGCTTCAATCACCAATGGCGTCGTTTATCTAATTCGTACTGCTAATCGTCGGATCTCATCGCCGGATTCTCCAGCTGACTCGGCCTCGTCTCGGCTCTACAGGATTATCAAAGTGTTTTTGATTGTAGTGCTTCTATTGCTTGTTTTTGAGCTTGTGGCGTACTTCAATGGCTGGCATTTCAGTCCCCCTTCTGTGAGTTCCGCTTCTGCGGAAGTGCTTGGAATGATAGGGTTTCTCTATGCTAATTGGCTTCAGATTCGGGCAAATTACCTGGCTCCACCGCTGCAGTACTTGACCAATCTCTGCATTGTGTTGTTCCTGATCCAGTCAGTGGATCGTTTGCTTTTAATGTTTGGGTGTTTTTGGATCAAGTTTAGGCGATTGAAGCCTGTTGCGGCATTTGAGTACTCTTCCACGGATGAAAATGCTGCTAGTCCTGAGGATTATCCAATGGTATTGGTGCAGATTCCCATGTGCAATGAGAGGGAGGTTTATCAACAATCTATTGCAGCTGTTTGTATCCAGGACTGGCCAAAGGATAAAATGCTTGTACAGGTTTTAGATGATTCTGATGAGCTGGATGTTCAACAACTTATCAAGGCTGAAGTACAAAAATGGCAACAGAGAGGTGTCCGCATATTGTATAGACACCGCCTCATACGTACAGGCTACAAGGCAGGGAATCTCAAATCTGCAATGGGGTGCGATTATGTAAAAGATTACGAGTTTGTGGCAATCTTTGATGCAGATTTTCAGCCAGGACCAGACTTTTTAAAGAAAACTATTCCACATTTTAAGGGGAATGATGAACTTGCATTGGTCCAAACAAGGTGGTCATTTGTGAACAAGGACGAAAACTTGCTCACAAGATTGCAGAACATAAATTTATCCTTCCATTTTGAAGTTGAGCAGCAAGTAAATGGCATGTTTATCAACTTTTTTGGTTTCAATGGTACTGCTGGAGTCTGGAGAATTAAAGCTTTGGAAGAATGTGGGGGCTGGTTAGAGAGAACAACTGTTGAGGACATGGATGTTGCAGTTCGTGCCCATCTTTGTGGCTGGAAGTTCATATATCTAAATGATGTGAAGTGCCTTTGCGAACTTCCAGAATCATATGAAGCATACAAGAAACAACAGCACCGCTGGCATTCGGGCCCTATGCAGTTATTTCGTTTGTGCTTCTCTGACATACTCAAATCAAAGGTGAGTTGGAAGAAGAAAGCTAATTTGATTTTTCTCTTCTTCCTCTTGCGAAAGCTCGTCCTTCCCTTTTATTCTTTTACCTTGTTCTGCATAATTCTCCCCCTTACCATGTTCCTTCCAGAAGCTCATCTACCGGCTTGGGTCGTTTGCTACGTTCCTGGAATCATGTCCATCTTAAATATTCTTCCCGCACCGCGATCATTTCCATTTTTAGTCCCCTATCTTCTATTTGAAAACACCATGTCTGTTACCAAATTCAATGCCATGATATCAGGGTTATTCCGCTTTGGAAGTTCATACGAATGGATAGTAACAAAAAAACTAGGAAGATCATCTGAAAACAATCTTGTTGCTTTTGAAAAAGAACTAGAACCTCTAGTTGAGGGTACAAGTCTTCATCGATCTTCCTCAGAATCAGGTCTTCAAGAACTGACCAAGCTCGAGATATCGAAAAAAACAGGGAAACACAAAAGAAATCGTTTGTATAGGAAGGAATTGGCTCTTGCATTCATTTTGTTAACTGCCTCGGCGAGAAGTCTGTTATCTGCTCAAGGAATTCACTTCTACTTCCTATTATTTCAAGGTATCACTTTTCTAGTCGTCGGTCTTGATTTAATCGGAGAGCAGGTGCTAAGAGCAGGAAATTCTGAGGTTATTGGAACCTTGATTCTTTTTTTGTCAAACTGA 2136 42.74 MSRTPNYEFQEWWNKQRERNHDEHLLEKSDNLSTSPAFLSVEIRSSGSPGDRMADKDRARTRSARQISWVWLLKFQQIAGSLASITNGVVYLIRTANRRISSPDSPADSASSRLYRIIKVFLIVVLLLLVFELVAYFNGWHFSPPSVSSASAEVLGMIGFLYANWLQIRANYLAPPLQYLTNLCIVLFLIQSVDRLLLMFGCFWIKFRRLKPVAAFEYSSTDENAASPEDYPMVLVQIPMCNEREVYQQSIAAVCIQDWPKDKMLVQVLDDSDELDVQQLIKAEVQKWQQRGVRILYRHRLIRTGYKAGNLKSAMGCDYVKDYEFVAIFDADFQPGPDFLKKTIPHFKGNDELALVQTRWSFVNKDENLLTRLQNINLSFHFEVEQQVNGMFINFFGFNGTAGVWRIKALEECGGWLERTTVEDMDVAVRAHLCGWKFIYLNDVKCLCELPESYEAYKKQQHRWHSGPMQLFRLCFSDILKSKVSWKKKANLIFLFFLLRKLVLPFYSFTLFCIILPLTMFLPEAHLPAWVVCYVPGIMSILNILPAPRSFPFLVPYLLFENTMSVTKFNAMISGLFRFGSSYEWIVTKKLGRSSENNLVAFEKELEPLVEGTSLHRSSSESGLQELTKLEISKKTGKHKRNRLYRKELALAFILLTASARSLLSAQGIHFYFLLFQGITFLVVGLDLIGEQVLRAGNSEVIGTLILFLSN 711
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 7737313 7744371 - ClG42_09g0084000.10 Clacu09g0840 257148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g0840 711 Pfam Glycosyl transferase family group 2 326 528 IPR001173 -
Clacu09g0840 711 FunFam probable xyloglucan glycosyltransferase 5 224 450 - -
Clacu09g0840 711 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 222 450 IPR029044 -
Clacu09g0840 711 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 159 693 - GO:0005794(PANTHER)|GO:0016757(PANTHER)
Clacu09g0840 711 SUPERFAMILY Nucleotide-diphospho-sugar transferases 231 510 IPR029044 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu08g1835 Clacu-Chr8:27609887 Clacu09g0840 Clacu-Chr9:7737313 1.00E-244 dispersed
Clacu09g0840 Clacu-Chr9:7737313 Clacu09g1919 Clacu-Chr9:34098473 1.30E-239 dispersed
Clacu09g0840 Clacu-Chr9:7737313 Clacu08g0960 Clacu-Chr8:19682349 1.00E-111 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g0840 - - - 0.0