Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g1189 ATGAGCCACACAGTCACCAAGTATTTGAGGCTACTACTCATGCTTCTGAGAATGAGAATCCCGAGCACACCGTTGAGGAGCCCATCGCTGAGGGATGAGTGTCACCCCACCATAAGTCAACGACCGCAAGGGGTGGGGGCATCTGTAGCACCCTTCATGAGATATAGCTTAGGGTTCTCGATTCCATATTCATGTTCCTCCGACAGAAGTTCATCGTTCAACCAGAGATGTGTGCACATCGGTTCACTATGTTGCCCCCGTGGCATATTGGCTGATCTTCAACCCACTCCTTGGAAGTGGAGTCGTATCGACTGTGGCAAACTACAAGGAAGAACTCTGGATTGTGGAATCTTCTGTCTTAAATTCTTTGAGTATTTGATCACCGGGGCAGATAAGAAGAGCCTACAACAGAGTAGAATGTTAGGATATAAGCTGCAGTACAGTGCCAAGTTGGTGAACGACGCGAGCTTTACCTTCTTTTTTGCGTACAAAGTGACGCACGAAGCGAAACCCACACAACCTCCTTCGGCAACCGCGACCACAGCGCCGACGACCTCCTTGCGGGCAAACCGGACGTGCGACCACGAACTCCAACCGACGTCCACGACCTCCGTGGGGATTGTAAAGAATCCGCAGATTTGGAGTAATTTCGGAACTGTTCGGACACTTTTCAGCAAGGATCCCAGTCTGCCTTGTTACCATCGCCACCAGTCAATGCTCATTCCTACTGCTGTCAATGCCCTCAAATCCTCAAGGTCAATATCTTGGTTGCCGACTGGTAGGCTTCAACAAACCTTGGCGAGATGTCTGGAGCTGAGTGGGATATCTCTGCATTCGGGGAAGGTTTCGAAAGTGAAATTATGTCCGGAATTTGCAGGTCGAGGGAGGTATTTTGATTTCAAGTCCAACTTCATTCCTGCCTCAATCAATTATGCCGAAGAGTCGCCTCTTTGTACCACACTTTCTAAGGATGGGTTCAAAATTCGAACAGTTGAGCATTTGCTTTCTGCCATGGAGGCTATGGGGGTTGACAATTGTAGGATCGAGATAGCGAATGAAGATGATAAAGATAGTGAAGTGGAGGTTCCAATTTTTGATGGATCTGCGGGTAAATGGGTGGATGCAATAGAGGAGATTGGTCTTAAGTTGGCTATAGACCAGTGTGGCAACTGCTGTGAGAAAATGGCACCATATGTAAATCAACCTGTCCATGTGTGGAGGAATGACTGTTATCTTGTTGCTTTTCCAGCCTCAGCAGTTTGTATCACTTATGGAATTGACTTTCCTCAGGTGCCTGACATTGGCCGCCAATGGTTTTCTACTGCCCCTTTGGACAACATGTTCTATGCCGAGCAAATAGCTCCATCAAGAACCTTTTGCATTTATGAGGAGGTAGAGCAAATGCGTAATATGGGACTCATAAAAGGAGGCTCCATAGAAAATGCTTTAGTTTGCAGTGTCAGCAAAGGTTGGATCAATCCCCCATTGCGTTTCCATGATGAACCTTGTCGCCACAAGGTTTTAGATTTAATTGGGGATCTGTCACTTTTTGCACAGTTGGGCAGTCAAGGGATTCCGGTGGCACACATAGTGGTTTACAAGGGTGGTCATGCTACGCACATTAATTTTGTTCGCCGCTTATCAGAAAACATTTGA 1656 47.04 MSHTVTKYLRLLLMLLRMRIPSTPLRSPSLRDECHPTISQRPQGVGASVAPFMRYSLGFSIPYSCSSDRSSSFNQRCVHIGSLCCPRGILADLQPTPWKWSRIDCGKLQGRTLDCGIFCLKFFEYLITGADKKSLQQSRMLGYKLQYSAKLVNDASFTFFFAYKVTHEAKPTQPPSATATTAPTTSLRANRTCDHELQPTSTTSVGIVKNPQIWSNFGTVRTLFSKDPSLPCYHRHQSMLIPTAVNALKSSRSISWLPTGRLQQTLARCLELSGISLHSGKVSKVKLCPEFAGRGRYFDFKSNFIPASINYAEESPLCTTLSKDGFKIRTVEHLLSAMEAMGVDNCRIEIANEDDKDSEVEVPIFDGSAGKWVDAIEEIGLKLAIDQCGNCCEKMAPYVNQPVHVWRNDCYLVAFPASAVCITYGIDFPQVPDIGRQWFSTAPLDNMFYAEQIAPSRTFCIYEEVEQMRNMGLIKGGSIENALVCSVSKGWINPPLRFHDEPCRHKVLDLIGDLSLFAQLGSQGIPVAHIVVYKGGHATHINFVRRLSENI 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 11687454 11708562 - ClG42_09g0118900.10 Clacu09g1189 257497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g1189 551 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 241 550 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Clacu09g1189 551 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 263 548 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Clacu09g1189 551 NCBIfam UDP-3-O-acyl-N-acetylglucosamine deacetylase 263 548 IPR004463 GO:0008759(InterPro)|GO:0009245(InterPro)
Clacu09g1189 551 Gene3D lpxc deacetylase, domain 1 261 386 IPR015870 GO:0008759(InterPro)|GO:0009245(InterPro)
Clacu09g1189 551 SUPERFAMILY Ribosomal protein S5 domain 2-like 262 381 IPR020568 -
Clacu09g1189 551 SUPERFAMILY Ribosomal protein S5 domain 2-like 401 549 IPR020568 -
Clacu09g1189 551 Gene3D lpxc deacetylase, domain 2 398 551 IPR011334 GO:0008759(InterPro)|GO:0009245(InterPro)
Clacu09g1189 551 Pfam Ulp1 protease family, C-terminal catalytic domain 94 148 IPR003653 GO:0006508(InterPro)|GO:0008234(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g1189 K02535 - csv:101205101 583.178