Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu09g1349 | ATGGCACTAGCAGTTAAGGCTTTTCCGTTCACTGTGGTGAGTCACGTGCTGGCAATCGTGGCGCTCATTCTTGTCCTGGTTTGGACCATTCACTTCAGAGGCGGCCTCGCTTGGGAGGCTGTCAATAAGAATCTCATCTTCAACATTCATCCTGTTCTTATGCTACTGGGATTGATCATCATAGGAGGTGAAGCAATAATTAGTTATAAATCACTGCCATTAAGGAAAGAAGTGAAGAAAGTGATTCATTTGGTGCTACACGGCGTCGCATTGGCACTGGGTATTGTGGGGATCATCGCCGCTTTCAAGAACCATAATGAGAGTGGGATCGCTAATCTTTACAGCTTGCATTCTTGGATTGGAATTGGCGTAATTAGCCTTTATGGTCTCCAGTGGGTGTACGGGTTCGTGACATTCTTCTACCCAGGAGGATCCGCAAATCTCCGACGAGCGTCACTCCCATGGCACGTGCTTTTTGGGATTACTATATACATATTGGCCGTCGGCAACTCGGCATTGGGTTTCCTTGAGAAGCTCACATTTCTAGAGAGCTCCGGCCTCGCTAAATACGGCACCGAGGCCTTTCTCGTCAACTTCACCGCCATCACCACCGTCATTTTTGCACTGTTTGTGATTTTGTCTGTTATTTCTCAGCCTTGCGTTCAAGAAGACAACCATGGCGATTATTCTGCGATATGA | 699 | 47.21 | MALAVKAFPFTVVSHVLAIVALILVLVWTIHFRGGLAWEAVNKNLIFNIHPVLMLLGLIIIGGEAIISYKSLPLRKEVKKVIHLVLHGVALALGIVGIIAAFKNHNESGIANLYSLHSWIGIGVISLYGLQWVYGFVTFFYPGGSANLRRASLPWHVLFGITIYILAVGNSALGFLEKLTFLESSGLAKYGTEAFLVNFTAITTVIFALFVILSVISQPCVQEDNHGDYSAI | 232 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 15731851 | 15740195 | + | ClG42_09g0134900.10 | Clacu09g1349 | 257657 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu09g1349 | 232 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| Clacu09g1349 | 232 | PANTHER | CYTOCHROME B561-RELATED | 5 | 222 | IPR043205 | GO:0016491(InterPro)|GO:0016491(PANTHER) | |
| Clacu09g1349 | 232 | Gene3D | - | 2 | 226 | - | - | |
| Clacu09g1349 | 232 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| Clacu09g1349 | 232 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| Clacu09g1349 | 232 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| Clacu09g1349 | 232 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g0677 | Clacu-Chr1:7320821 | Clacu09g1349 | Clacu-Chr9:15731851 | 3.90E-49 | dispersed | |
| Clacu07g0672 | Clacu-Chr7:13128223 | Clacu09g1349 | Clacu-Chr9:15731851 | 6.10E-47 | dispersed | |
| Clacu09g1349 | Clacu-Chr9:15731851 | Clacu11g0678 | Clacu-Chr11:6565466 | 1.20E-53 | dispersed | |
| Clacu09g1349 | Clacu-Chr9:15731851 | Clacu05g2505 | Clacu-Chr5:33141740 | 6.60E-28 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu09g1349 | K08360 | - | csv:101209308 | 385.956 |