Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g1411 | ATGATTGAAGATTACATTTCTGAGTTCAGTTCTATTCCAAAGGAGAGTTTAAATTTTGTATTTCCAATCAAGTTTTTGGGTGAAGTTTGGAAGATGGCAGATGGTGAAGATATTCAACCTCTTGTCTGTGATAATGGAACTGGGATGGTCAAGGCTGGATTTGCTGGTGACGATGCTCCAAGGGCCGTATTTCCTAGTATCGTTGGTAGACCACGTCATACCGGTGTGATGGTTGGAATGGGCCAGAAGGATGCATATGTTGGTGATGAAGCTCAGTCAAAAAGGGGTATTCTTACATTGAAATACCCAATTGAGCATGGCATTGTAAGCAACTGGGATGACATGGAAAAGATTTGGCATCACACCTTCTACAATGAGCTTCGTGTTGCTCCTGAAGAGCATCCGATACTTCTTACTGAGGCACCACTCAACCCAAAGGCAAACAGGGAGAAGATGACTCAGATCATGTTTGAAACCTTCGACGTACCTGCTATGTATGTTGCAATCCAGGCCGTTTTATCTCTCTATGCCAGTGGTCGGACAACAGGTATTGTGTTGGATTCTGGTGATGGAGTGAGCCACACGGTGCCTATATACGAGGGCTTTTCACTCCCTCATGCAATCCTACGTCTCGACCTTGCTGGTCGTGATTTGACTGATGCTTTGATGAAAATTCTTACTGAAAGAGGTTACATGTTCACGACAACGGCAGAGCGGGAAATTGTCCGTGATGTGAAGGAGAAGCTTGCATATGTGGCCCTTGATTATGAGCAAGAACTGGAGACAGCCAGGACTAGTTCGGCCATTGAGAAAAGCTATGAACTACCTGATGGGCAGGTGATTACGATTGGAGCTGAGAGATTCCGATGCCCAGAAGTACTTTTCCAGCCATCTCTGATTGGCATGGAATCGCCTGGAATCCATGAAACCACATACAACTCCATCATGAAGTGTGATGTTGATATCAGGAAGGACTTGTATGGTAACATTGTCCTCAGTGGTGGTACGACGATGTTCCCTGGTATTGCTGATCGGATGAGCAAAGAAATCACAGCCCTCGCTCCGAGCAGCATGAAGATCAAGGTTGTTGCTCCTCCAGAAAGGAAGTACAGTGTTTGGATTGGAGGTTCCATCCTAGCATCCCTCAGTACCTTCCAACAGATGTGGATAACAAAGGCTGAATATGACGAGTCGGGTCCAGCTATAGTTCACAGGAAATGCTTCTGA | 1227 | 45.64 | MIEDYISEFSSIPKESLNFVFPIKFLGEVWKMADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREKMTQIMFETFDVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDVKEKLAYVALDYEQELETARTSSAIEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMESPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWITKAEYDESGPAIVHRKCF | 408 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 19447196 | 19451937 | - | ClG42_09g0141100.10 | Clacu09g1411 | 257719 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g1411 | 408 | SUPERFAMILY | Actin-like ATPase domain | 180 | 408 | IPR043129 | - | |
Clacu09g1411 | 408 | Gene3D | Actin; Chain A, domain 4 | 213 | 304 | - | - | |
Clacu09g1411 | 408 | PANTHER | ACTIN | 39 | 400 | IPR004000 | - | |
Clacu09g1411 | 408 | Gene3D | - | 171 | 371 | - | - | |
Clacu09g1411 | 408 | Gene3D | - | 41 | 402 | - | - | |
Clacu09g1411 | 408 | FunFam | Putative actin-related protein 5 | 372 | 400 | - | - | |
Clacu09g1411 | 408 | Pfam | Actin | 36 | 408 | IPR004000 | - | |
Clacu09g1411 | 408 | SMART | actin_3 | 38 | 408 | IPR004000 | - | |
Clacu09g1411 | 408 | CDD | NBD_sugar-kinase_HSP70_actin | 41 | 214 | - | - | |
Clacu09g1411 | 408 | FunFam | Major actin | 292 | 371 | - | - | |
Clacu09g1411 | 408 | SUPERFAMILY | Actin-like ATPase domain | 37 | 186 | IPR043129 | - | |
Clacu09g1411 | 408 | ProSitePatterns | Actins signature 2. | 389 | 397 | IPR004001 | - | |
Clacu09g1411 | 408 | PRINTS | Actin signature | 82 | 93 | IPR004000 | - | |
Clacu09g1411 | 408 | PRINTS | Actin signature | 148 | 161 | IPR004000 | - | |
Clacu09g1411 | 408 | PRINTS | Actin signature | 59 | 68 | IPR004000 | - | |
Clacu09g1411 | 408 | PRINTS | Actin signature | 269 | 285 | IPR004000 | - | |
Clacu09g1411 | 408 | PRINTS | Actin signature | 94 | 116 | IPR004000 | - | |
Clacu09g1411 | 408 | PRINTS | Actin signature | 173 | 192 | IPR004000 | - | |
Clacu09g1411 | 408 | FunFam | Actin, alpha skeletal muscle | 34 | 197 | - | - | |
Clacu09g1411 | 408 | ProSitePatterns | Actins signature 1. | 86 | 96 | IPR004001 | - | |
Clacu09g1411 | 408 | ProSitePatterns | Actins and actin-related proteins signature. | 137 | 149 | IPR020902 | - | |
Clacu09g1411 | 408 | FunFam | Actin, muscle | 213 | 304 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu06g1599 | Clacu-Chr6:26825772 | Clacu09g1411 | Clacu-Chr9:19447196 | 3.60E-75 | dispersed | |
Clacu09g0404 | Clacu-Chr9:3573225 | Clacu09g1411 | Clacu-Chr9:19447196 | 6.50E-55 | dispersed | |
Clacu09g1411 | Clacu-Chr9:19447196 | Clacu10g1739 | Clacu-Chr10:30918767 | 8.40E-212 | dispersed | |
Clacu09g1411 | Clacu-Chr9:19447196 | Clacu02g0071 | Clacu-Chr2:723767 | 1.30E-212 | transposed | |
Clacu09g1411 | Clacu-Chr9:19447196 | Clacu01g1629 | Clacu-Chr1:28384949 | 1.30E-212 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g1411 | K10355 | - | csv:101214459 | 755.362 |