Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g1502 ATGGCTTCCTTTCATGCAGAAGCTTCTGAGTCTGGCAGTGTTCATTATACTCAGCGAGCTCAGTGGCTGCGAGCAGCAATTCTCGGGGCCAACGATGGGCTCGTCTCCGTTGCATCACTGATGATGGGCGTTGGAGCCGTGAAGCCCGATGCCAAAGCCATGCTTATTGCTGGATTTGCGGGGCTGGTTGCTGGAGCTTGCAGTATGGCGATCGGAGAGTTTGTCTCTGTTTACACCCAATATGATATAGAGAAAGCTCAGCTGAAGAGAGATGGGAAAGAAAAGAAAAAGAGCATACAACCAAACGACCAGGCTGAGGAGGAAGAGAAGCTGCCAAATCCATTACAGGCTGCACTCGCATCAGCGATAGCGTTTTCGATTGGAGCAGTCATTCCTTTGCTGGCAGCGGTGTTTATCCAAGACCATAAGGTGAGGCTCGGGGTGGTCGCAGCGGTGGCGAGCGTGACGCTGGCAGTTTTCGGGGTAGTTGGAGCCATTTTGGGGAGAACTCCGGTGGGGAAATCGGCGGCAAGAGTGGTTGTTGGAGGGTGGATGGCAATGGCCATTACTTTTGGCCTTACAAAGCTGCTTGGGTCTAAGGGACTGTGA 609 52.87 MASFHAEASESGSVHYTQRAQWLRAAILGANDGLVSVASLMMGVGAVKPDAKAMLIAGFAGLVAGACSMAIGEFVSVYTQYDIEKAQLKRDGKEKKKSIQPNDQAEEEEKLPNPLQAALASAIAFSIGAVIPLLAAVFIQDHKVRLGVVAAVASVTLAVFGVVGAILGRTPVGKSAARVVVGGWMAMAITFGLTKLLGSKGL 202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 23676683 23677855 - ClG42_09g0150200.10 Clacu09g1502 257810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g1502 202 MobiDBLite consensus disorder prediction 92 110 - -
Clacu09g1502 202 Pfam VIT family 107 194 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Clacu09g1502 202 Pfam VIT family 23 104 IPR008217 GO:0005384(InterPro)|GO:0030026(InterPro)
Clacu09g1502 202 PANTHER FE(2+)/MN(2+) TRANSPORTER PCL1 9 198 IPR008217 GO:0005381(PANTHER)|GO:0005384(InterPro)|GO:0005384(PANTHER)|GO:0006880(PANTHER)|GO:0016020(PANTHER)|GO:0030026(PANTHER)|GO:0030026(InterPro)
Clacu09g1502 202 MobiDBLite consensus disorder prediction 92 111 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g0964 Clacu-Chr9:9035772 Clacu09g1502 Clacu-Chr9:23676683 6.80E-59 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g1502 K22736 - csv:101214875 342.043