Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu09g1738 | ATGGAGTCTCTGTTGCGCAGTTTCATCGCCAAATATGGCCCCATCCTCACCCTCCCCACCGGCTCCAGCCCCGCCATCGTCATCGCCGACCGCTCTATCGCCCACAAAGCCCTCCTCAAAAACGCCGCTCTCTTCGCTGACCGCCCACCGGCCCTCGCCATGAGCAACATCATCTCCACCCACCATTACAACCTCTCCTCTGCTCCGTACGGCCCACTCTGGCGCCTCCTCCGCCGCAATCTTACTTCCCAAATCCTCCATCCTTCCCGTGTCAAGTCCTACGCCCGTTCTCGCAAGTGGGTTTTGGACGTTCTTCTTAATCGCTTTCTCTCTCACTCTCGATCCGGAACTCCCGTGTGCGTTGTCGATCATTTTCAGTACGCTATGATCTATTTGTTGGTGAATATGTGCTTTGGGGATAAGTTTGACGAAACCCAGATCAAGGAAATTGAGAACGTGGAGCGTGAGTTGCTAGTAAATCTTCAGCGTTTCATTGTCCTTAATTTTTGGCAAAAATTGACCAACATTTTGTTTCGAAATCGCAAACTGATGTTTTTGCAACTTAGAAGAAAGCAAGAGAAGGTATTAATGCCTCTAATCAATGCGAGAAGACAGGCCAAGCAAGAAAGAGAAAACAGAGAATACAGAGCAAAAAGGATTGAAACTGATGATGACGACGACGAAGAAGAAGAAGAAGAATTCGTGATATTATATGTTGATATGCTACTGGATTTGGAGTTGCCCGATGAGAAGAGAAAGCTTACTGATGACGAAATAGTCACTTTATGCTCCGAGTTTCTCAACGCCGGCACCGACACCACCTCCACAGCATTACAGTGGATTATGGCGAATTTAGTGAAATACCCAGAAATCCAAAACAAGCTTTTTGTTGAGATGAAAGGAGTAATGGGAGATGGATCAAGGGAGGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCATATTTGAAAGCAGTGGTTTTAGAAGGATTAAGAAGGCATCCACCAGTGCATTTCGTGGTACCACACGCAGTGAAAGAAGATACAGAGTTAGAAAATTATGTGATACCAAGGAATGGGAGTGTACATTTCACGGTGGCGGAGATGGGTTGGGATTCAAAAGTATGGGAAGATCCGATGGAGTTTAAGCCGGAGAGGTTCATGAAGGGCGGCGAAGAAGAAGAAATGGCGGGGTTTGATTTAACAGGGAGCAAAGAGATTAAGATGATGCCGTTCGGAGTAGGGAGGAGAATTTGCCCAGCGATTGGACTGGCAATGCTTCATTTGGAATATTTCATTGCAAATTTGGTATGGCGGTTTCAATGGAAGGCGGTGGATGGAGACGCCGTCGATCTTGCGGAGAAGATGGAGTTCACCGTCCTCATGAAAATGCCTCTCAAAGTTAACATATATTCAAGATTTTAA | 1422 | 46.48 | MESLLRSFIAKYGPILTLPTGSSPAIVIADRSIAHKALLKNAALFADRPPALAMSNIISTHHYNLSSAPYGPLWRLLRRNLTSQILHPSRVKSYARSRKWVLDVLLNRFLSHSRSGTPVCVVDHFQYAMIYLLVNMCFGDKFDETQIKEIENVERELLVNLQRFIVLNFWQKLTNILFRNRKLMFLQLRRKQEKVLMPLINARRQAKQERENREYRAKRIETDDDDDEEEEEEFVILYVDMLLDLELPDEKRKLTDDEIVTLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNKLFVEMKGVMGDGSREEVKEEDLGKLPYLKAVVLEGLRRHPPVHFVVPHAVKEDTELENYVIPRNGSVHFTVAEMGWDSKVWEDPMEFKPERFMKGGEEEEMAGFDLTGSKEIKMMPFGVGRRICPAIGLAMLHLEYFIANLVWRFQWKAVDGDAVDLAEKMEFTVLMKMPLKVNIYSRF | 473 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 31290329 | 31291750 | + | ClG42_09g0173800.10 | Clacu09g1738 | 258046 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu09g1738 | 473 | FunFam | Cytochrome P450 family protein | 1 | 473 | - | - | |
| Clacu09g1738 | 473 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 411 | 420 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu09g1738 | 473 | CDD | CYP77_89 | 11 | 466 | - | - | |
| Clacu09g1738 | 473 | Gene3D | Cytochrome P450 | 1 | 473 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 33 | 54 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 323 | 341 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 258 | 275 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 9 | 28 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 408 | 418 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 128 | 146 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 278 | 304 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 364 | 388 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | E-class P450 group I signature | 418 | 441 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | Pfam | Cytochrome P450 | 3 | 461 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | P450 superfamily signature | 269 | 286 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | P450 superfamily signature | 324 | 335 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PRINTS | P450 superfamily signature | 409 | 418 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1738 | 473 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 5 | 469 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Clacu09g1738 | 473 | SUPERFAMILY | Cytochrome P450 | 5 | 472 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu09g1738 | Clacu-Chr9:31290329 | Clacu09g1741 | Clacu-Chr9:31349377 | 3.40E-196 | dispersed | |
| Clacu09g1738 | Clacu-Chr9:31290329 | Clacu09g1740 | Clacu-Chr9:31339940 | 2.80E-150 | proximal |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu09g1738 | K24184 | - | csv:101204559 | 675.626 |