Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu09g1740 | ATGGCCCTGTTCTCACTCTCCGCATCGGCCCCACCTCCACCATCTTCATCGCCGACCACTCAATTGCCCACAAGATCCTTGTCCAAAACGGTGCTCTCTTTGCTGACCGTCCACCGGCGCTACCCGTTGGCAAGGTCTTACAGTCAAGCTCGCAAGTGGGTTTTGGATATTCTTGTCAATCGTCTTCAATCTCAATCTGAATCTGGAAGCCCCGTCTCAGTCATCGAGAATTTTCAGTACGCCATGTTTTGTTTGCTGGTGTTGATGTGTTTTGGGGATAAGCTTGAGGAATCCCAGATCCGCGAAGTCGAGAACGTGGAACGAGCGCTTATATTGAGTTTTCCGCGTTTTAACATTCTCAATTTCTGGCCTAAATTTACAAAGATTTTTCTTCGAAAACGCTGGGAGGCGTTTTTCCAACTAAGAAGGAACCAAGTGAAGGTCCTAACCCGTTTGATCGAAGCCCGAAGGAAAGCCAATCAAAACAGAGCAAACAGAGCCGAAAATGAAGAAAGAGAAGAAGAAGAATTCGTGGTGTCATATGTCGATACACTGCTGGAATTGGAGCTCCCTGACGAGAAGAGAAAGCTCAATGATGACGAAATGGTCACATTATGCTCTGAGTTTCTCAACGCCGGCACAGATACAACGTCGACGGCCCTGCAATGGATAATGGCAAATTTAGTGAAATACCCAGAAATCCAAAACAAACTTTATGCAGAGATGAAAGGAAAAATGGGAGATGGAACAGGGGAAGAGGTGAAGGAAGAGGATTTGGGGAAACTTCCACATCTGAAAGCTGTGGTTTTAGAAGGATTAAGAAGACACCCACCAGCGCATTTCGTGCTGCCACACTCGGTGAAAGAAGATACAGAGTTGGGAAATTATGTGATACCAAAGAAAGGGACTGTAAATTTCATGGTGGCGGAAATGGGTCGGGATCCAAAAGTGTGGGAAGATCCGAATGCGTTTAAGCCGGAGAGGTTCATGAAGGGCGGGAAAGAAGAAGAAGTAGCAGAGTTTGATGTAACAGGGAGCAAAGAGATAAAGATGATGCCGTTCGGAGCAGGGAGGAGGATATGTCCAGGATGGAGTGTGGCGATTCTCCATTTGGAGTATTTCGTTGCTAATTTGGTTTGGCGGTTCGAATGGAAGGCCGTGGATGGAGACGAAGTTGATATGTCGGAGAAGGTAGAGCTCACGGTCTCGATGAACAATCCCCTAAAAGCCAAAATACATCCAAGGATTCATATTTGA | 1257 | 46.38 | MALFSLSASAPPPPSSSPTTQLPTRSLSKTVLSLLTVHRRYPLARSYSQARKWVLDILVNRLQSQSESGSPVSVIENFQYAMFCLLVLMCFGDKLEESQIREVENVERALILSFPRFNILNFWPKFTKIFLRKRWEAFFQLRRNQVKVLTRLIEARRKANQNRANRAENEEREEEEFVVSYVDTLLELELPDEKRKLNDDEMVTLCSEFLNAGTDTTSTALQWIMANLVKYPEIQNKLYAEMKGKMGDGTGEEVKEEDLGKLPHLKAVVLEGLRRHPPAHFVLPHSVKEDTELGNYVIPKKGTVNFMVAEMGRDPKVWEDPNAFKPERFMKGGKEEEVAEFDVTGSKEIKMMPFGAGRRICPGWSVAILHLEYFVANLVWRFEWKAVDGDEVDMSEKVELTVSMNNPLKAKIHPRIHI | 418 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 31339940 | 31341303 | + | ClG42_09g0174000.10 | Clacu09g1740 | 258048 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu09g1740 | 418 | Pfam | Cytochrome P450 | 40 | 405 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 44 | 414 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Clacu09g1740 | 418 | PRINTS | E-class P450 group I signature | 221 | 247 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | E-class P450 group I signature | 266 | 284 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | E-class P450 group I signature | 351 | 361 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | E-class P450 group I signature | 81 | 99 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | E-class P450 group I signature | 201 | 218 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | E-class P450 group I signature | 307 | 331 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | E-class P450 group I signature | 361 | 384 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | Coils | Coil | 152 | 176 | - | - | |
| Clacu09g1740 | 418 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 354 | 363 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Clacu09g1740 | 418 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - | |
| Clacu09g1740 | 418 | Gene3D | Cytochrome P450 | 22 | 417 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | SUPERFAMILY | Cytochrome P450 | 40 | 415 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | CDD | CYP77_89 | 45 | 409 | - | - | |
| Clacu09g1740 | 418 | PRINTS | P450 superfamily signature | 267 | 278 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | P450 superfamily signature | 361 | 372 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | P450 superfamily signature | 212 | 229 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Clacu09g1740 | 418 | PRINTS | P450 superfamily signature | 352 | 361 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu09g1740 | Clacu-Chr9:31339940 | Clacu07g0141 | Clacu-Chr7:1795908 | 1.70E-42 | dispersed | |
| Clacu09g1738 | Clacu-Chr9:31290329 | Clacu09g1740 | Clacu-Chr9:31339940 | 2.80E-150 | proximal | |
| Clacu09g1740 | Clacu-Chr9:31339940 | Clacu09g1741 | Clacu-Chr9:31349377 | 2.80E-178 | tandem |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu09g1740 | K24184 | - | csv:101220777 | 634.409 |