Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g1915 ATGGAGTTTCTCTTCTTCCTCCTCCTTTCCGTCTTCTCTCATTCCGCCTCCGCCGCTCTCTCCGCCGACTACTACCGGAATTCCTGCCCTGCATTTTCTCAGATCATCCGCGACACTGTCACCAACAAGCAAATCACCACCCCTACCACCGCCGCCGCCACCCTCCGTCTCTTCTTCCACGACTGTCTCCCCAACGGCTGCGACGCCTCCATCCTCATCTCCTCCACCCCCTTCAACGTCGCCGAGCGCAACGCCGACATCAACCTCTCCCTTCCCGGCGACGCCTTCGACGTTGTCGTCCGTGCTAAAACCGCCCTCGAACTCTCTTGCCCCAACACCGTCTCCTGCGCCGACATCCTCACTGCCGCCACTCGCGACCTCCTCACCATGGTTGGCGGCCCTTACTACACCGTCTTCCTCGGCCGCAAAGACGCCAAGGTTTCCAAAGCCTCCGCTATTGAAGGTTCTCTCCCTAGACCCACCATGTCCGTCTCTGAGATCATCAGAATTTTCGCCTCCAGAGGATTTTCCGTTCAGGAAATGGTAGCGTTAAGCGGCGCTCATTCAATTGGCTTCTCGCATTGTAAGGAGTTCGCCTCTGAGATCTTCAATTACAGCAAATCCCCGCCCTACGACAGCCATTACAACCCTCGATTCGCATTAGGGTTACAGCGAGCTTGCGCCGATTACCAGAAGAATCCAACTCTATCGGTTTTTAACGACATTATGACGCCGAACAAATTCGACAACATGTATTTCAAGAATCTGCAGAAAGGGTTAGGCCTTTTGAAGTCCGATGGCGGATTGTACAGCGATCCAAGAACGAGGCCGTGGGTGGAGAAATATGCTGCCGATGAGAGCGTGTTCTTCGGGGCGTTTTCTCAAGCGATGGTGAAGCTTGGTGGCTATGGCGTCAAAGTGGGGAATGAAGGAGAAATCAGACGCAGGTGCGATGCCTTTAATTGA 966 54.45 MEFLFFLLLSVFSHSASAALSADYYRNSCPAFSQIIRDTVTNKQITTPTTAAATLRLFFHDCLPNGCDASILISSTPFNVAERNADINLSLPGDAFDVVVRAKTALELSCPNTVSCADILTAATRDLLTMVGGPYYTVFLGRKDAKVSKASAIEGSLPRPTMSVSEIIRIFASRGFSVQEMVALSGAHSIGFSHCKEFASEIFNYSKSPPYDSHYNPRFALGLQRACADYQKNPTLSVFNDIMTPNKFDNMYFKNLQKGLGLLKSDGGLYSDPRTRPWVEKYAADESVFFGAFSQAMVKLGGYGVKVGNEGEIRRRCDAFN 321
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34036628 34037593 - ClG42_09g0191500.10 Clacu09g1915 258223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g1915 321 ProSiteProfiles Plant heme peroxidase family profile. 19 321 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 Gene3D Peroxidase, domain 2 158 300 - -
Clacu09g1915 321 PRINTS Haem peroxidase superfamily signature 132 144 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Haem peroxidase superfamily signature 114 131 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Haem peroxidase superfamily signature 51 65 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Haem peroxidase superfamily signature 180 195 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 FunFam Peroxidase 158 300 - -
Clacu09g1915 321 SUPERFAMILY Heme-dependent peroxidases 20 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 ProSitePatterns Peroxidases active site signature. 51 62 IPR019794 GO:0004601(InterPro)
Clacu09g1915 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 180 190 IPR019793 -
Clacu09g1915 321 Gene3D - 23 321 - -
Clacu09g1915 321 FunFam Peroxidase 23 167 - -
Clacu09g1915 321 PRINTS Plant peroxidase signature 132 147 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 94 107 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 113 123 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 29 48 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 179 191 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PRINTS Plant peroxidase signature 53 73 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 PANTHER - 4 321 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Clacu09g1915 321 CDD secretory_peroxidase 23 320 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Clacu09g1915 321 Pfam Peroxidase 37 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g1915 Clacu-Chr9:34036628 Clacu11g0924 Clacu-Chr11:8916384 1.10E-73 dispersed
Clacu01g1479 Clacu-Chr1:26872763 Clacu09g1915 Clacu-Chr9:34036628 4.20E-108 wgd
Clacu10g1450 Clacu-Chr10:27652853 Clacu09g1915 Clacu-Chr9:34036628 2.10E-133 wgd
Clacu06g1778 Clacu-Chr6:28318588 Clacu09g1915 Clacu-Chr9:34036628 6.20E-104 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g1915 K00430 - csv:105435603 554.673