Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g1922 ATGTCACAAGGGTTTGCGATCGAGCTCTATTTCGATCCGGCACTTGAAAATCAGGTTCTCAAGGCTTGGAATGTACTTGCTCGCCGTCAAATTAGTACCCAACTCATCGAAATTGAATCACGCCCTCACATTACCCTCTTCTCCAGCCCTTTTCTCGAACCCACAAAAGTTGAATCCATCGTTAAAAATTTCGCTTCTAAACAGGAACCCATGCCTTTGTCCTTATCGTCAATTGGCAGCCTTCCCAGTGACAACAACATTCTCTTTCTCGGTCCAGCGCCTTCAATTTCACTTCTCCAATTCCAGTCCCAATTGTGCGAAGCAATGAGGAAAGAAGGAATTGAAATCGGTGAGGAATATCGCCTTGGTTCGTGGATTCCCCATTGCGCTGTTGCTCAGGAGGTGCCTAAGGCTCGAATGGCTGAGGCATTTTGTGTTCTGAGGGATTTGAAGCTACCAGTTTCCGGGTATGCAATTGATATTGGGTTGGTGGAATTTTCCCCTGTTCGAGAGCTGTTCTCTTTTGTTCTTGGTAACACTGTCGAAGCTTGA 552 46.2 MSQGFAIELYFDPALENQVLKAWNVLARRQISTQLIEIESRPHITLFSSPFLEPTKVESIVKNFASKQEPMPLSLSSIGSLPSDNNILFLGPAPSISLLQFQSQLCEAMRKEGIEIGEEYRLGSWIPHCAVAQEVPKARMAEAFCVLRDLKLPVSGYAIDIGLVEFSPVRELFSFVLGNTVEA 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34113096 34113647 - ClG42_09g0192200.10 Clacu09g1922 258230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g1922 183 SUPERFAMILY LigT-like 5 155 IPR009097 -
Clacu09g1922 183 Pfam 2'-5' RNA ligase superfamily 40 164 - -
Clacu09g1922 183 PANTHER - 1 182 - -
Clacu09g1922 183 Gene3D Cyclic phosphodiesterase 5 178 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g1922 - - - 0.0