Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g1938 ATGGGGCGTTTTGGGAACTTGGGAAATTGTGACAAATTGATGACGATGGAAAATGGGGGCACAAAGAGGTATGAAAATGAAGCAGTGGCATTGAGTTGCACAATGGTGGGCGCTGGCAGCGATGGCTCGCTTCATACCTGCGCAAGGGTTTGCCTTATCCACCAAAATGAGTCCCTCATCTTTTCTACTTATGTTCAGCCAACCCTTCCCGTCACTAACTATAGGTTTGAATCCACGGGTGTTCGTCCAGAATACTTGAGAGATGCAATGCCATTGAAGCAAGTTCAAAAGAAAATACAAGAGTTTCTATGCAATGGAGAACCAATGTGGAAAATTCGACCTGGAGCTACTGGAAAAGCAAGGATTCTTGTGGGTCATGGCGTAGAAGAAGACCTTACACGTTTGCACATTGACTATCCTACTTTCATGATAAGATACAATATGGAAAATGGGAAGAAAGAGGGTTATGAGGGGTGTGTTGCCACAATGAGATTGTACATGAGAATGAAATCCCAAGTTCACAAAAGAGAGGATTATCCATTGGCTTCTGATCCACAAAATAAACATAACTTTGCAATTTGGAAGCAATTTGAGCTTGAGAAGATGAGCCCACAACAAATGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGCTTAGACTCCAACCCTTCATAA 678 42.04 MGRFGNLGNCDKLMTMENGGTKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGVEEDLTRLHIDYPTFMIRYNMENGKKEGYEGCVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAIWKQFELEKMSPQQMLQISRSDYYCWCLDSNPS 225
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 34240655 34243151 - ClG42_09g0193800.10 Clacu09g1938 258246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g1938 225 Gene3D - 23 150 IPR036397 GO:0003676(InterPro)
Clacu09g1938 225 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 154 221 IPR047021 GO:0004527(InterPro)|GO:0004527(PANTHER)|GO:0005634(PANTHER)
Clacu09g1938 225 SUPERFAMILY Ribonuclease H-like 29 170 IPR012337 -
Clacu09g1938 225 SMART exoiiiendus 27 175 IPR013520 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g1938 Clacu-Chr9:34240655 Clacu09g1939 Clacu-Chr9:34261327 8.30E-68 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g1938 - - - 0.0