Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g1938 | ATGGGGCGTTTTGGGAACTTGGGAAATTGTGACAAATTGATGACGATGGAAAATGGGGGCACAAAGAGGTATGAAAATGAAGCAGTGGCATTGAGTTGCACAATGGTGGGCGCTGGCAGCGATGGCTCGCTTCATACCTGCGCAAGGGTTTGCCTTATCCACCAAAATGAGTCCCTCATCTTTTCTACTTATGTTCAGCCAACCCTTCCCGTCACTAACTATAGGTTTGAATCCACGGGTGTTCGTCCAGAATACTTGAGAGATGCAATGCCATTGAAGCAAGTTCAAAAGAAAATACAAGAGTTTCTATGCAATGGAGAACCAATGTGGAAAATTCGACCTGGAGCTACTGGAAAAGCAAGGATTCTTGTGGGTCATGGCGTAGAAGAAGACCTTACACGTTTGCACATTGACTATCCTACTTTCATGATAAGATACAATATGGAAAATGGGAAGAAAGAGGGTTATGAGGGGTGTGTTGCCACAATGAGATTGTACATGAGAATGAAATCCCAAGTTCACAAAAGAGAGGATTATCCATTGGCTTCTGATCCACAAAATAAACATAACTTTGCAATTTGGAAGCAATTTGAGCTTGAGAAGATGAGCCCACAACAAATGTTGCAAATTTCAAGATCTGATTACTATTGTTGGTGCTTAGACTCCAACCCTTCATAA | 678 | 42.04 | MGRFGNLGNCDKLMTMENGGTKRYENEAVALSCTMVGAGSDGSLHTCARVCLIHQNESLIFSTYVQPTLPVTNYRFESTGVRPEYLRDAMPLKQVQKKIQEFLCNGEPMWKIRPGATGKARILVGHGVEEDLTRLHIDYPTFMIRYNMENGKKEGYEGCVATMRLYMRMKSQVHKREDYPLASDPQNKHNFAIWKQFELEKMSPQQMLQISRSDYYCWCLDSNPS | 225 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 34240655 | 34243151 | - | ClG42_09g0193800.10 | Clacu09g1938 | 258246 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g1938 | 225 | Gene3D | - | 23 | 150 | IPR036397 | GO:0003676(InterPro) | |
Clacu09g1938 | 225 | PANTHER | RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED | 154 | 221 | IPR047021 | GO:0004527(InterPro)|GO:0004527(PANTHER)|GO:0005634(PANTHER) | |
Clacu09g1938 | 225 | SUPERFAMILY | Ribonuclease H-like | 29 | 170 | IPR012337 | - | |
Clacu09g1938 | 225 | SMART | exoiiiendus | 27 | 175 | IPR013520 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu09g1938 | Clacu-Chr9:34240655 | Clacu09g1939 | Clacu-Chr9:34261327 | 8.30E-68 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g1938 | - | - | - | 0.0 |