Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g2029 ATGGAATTTGCCGACGAGCTCACGGCCGGAGCCACCGCCTCCAATTCCAACCGCCACAAGCCCTCCGATACTAGAGACAGCGGCGAGCTCTCATCTTCCGACAACGACACCGAAGATGTACATCCTGTTTTTTCTAACATGCCCGCTTCACTTGCACCACCAGTGTTTCCCACTCTTCCTCTGCAAAGTAAAAGTAATGTAGCGATTCAGGCTGATATGGATGATAAATTGGAGACAATACAAAATATATGTCAGAAAATTGTGGACACCACAAACTTGTACTCATTTTCTAAATTGGATGACCAGCAAGTATATTCTCTTATGAGGCTGAGGGAAATTTCTCATCGGATTATCAATGACCGTGATTCAAGGGTGACAAGAAATGATGTGATTAGTGCTATGTGTTTTTACATCAACAGGCTGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAAGATGTCATATAAAGACTTGGATGACCAGCAAATGCAACAGCTATTGAGATTGAAAGAGCTCCTATGTGGGATTGTAGATGGAGCTAAAGACGTGGAAACTGAACCTTCCCATATTGTTGAACAGGGCATGGTAAGTGATATGTGGACGACTGAGAGTTTGGAGGTTGAGCCACTTGATTCCTGCAATGATGATGTACCACTTGGAGAGACACAAATTGTAATGGTTGAAGATGAACAGGCAGTAGCTGAAGTTAGGCTTGAGAATCAATATTGTGACCCACATGTTAAACACTCAGTCAGTTGGCCAAAAAATGGTAGCTTAACCTTAGAGTGGGTTGTCGAGATGATGAAAACTCTCGAGCTGTCTTCAAGAAACTACTCACCTGCGGAGTTTCAACTTATCATGCCAGTTTCTGTGGTAGATTCAATACTTGATGTAGCTGCGAGTATCCTTCACAAGGAACCAAACTGCGTGGAAGTTGACTGCCATGGAGAAGTTTCAAAAGTGGTTATAGTTGGGGACATTCATGGACATTATCATGACTTACTTCATCTATTTGAACTTGCTAATTTGCCATCTAAAAGCCAGTATTTCGTTTTTAATGGTAATTATGTGGACAGAGGAGCATGGGGACTTGAGGTGTTTTTGGTCTTATTGGCATGGAAGATCTTGATGCCTGATAGAGTATATATGCTCCGTGGAAATCATGAAACCCGAAGTTGTACATCATCCTACGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAAAGTATATCACAGGTGCTTGGAAACGTTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACACATGGAGGGTTATTTCGTAAACCATGCAATCCTGATGTGCAGAATGACAAGGAAAGGAAAACGCAGAAGCTGGAGATTGGATCCTTGCAAGACTTATCTAAGCTTGAAAGGTTTTTTATTGACATTCCAACTGAAGATGAAGATCCAAATATAGTTTTGGCAGATGTATTGTGGTCGGATCCTTCTAAGGTAGATGGTTTAAGGGAAAATCAAGCCAGAGGAGCGGGCCTACTGTGGGGTCCTGATTCTACTGAAGCATTCTTAAAGCTGTCCAATTTAAAGTTGATCATTAGGTCACATGAAGGCCCAGATTCAAGGGACGGTAAGATTGATTTTGATGATATGATAATGGGTTATAGCACAGATCACGACATAGAATCAGGGAAATTATATACTCTATTTAGCGCTCCAGATTTCCCTCAGTTTGGTCAGAAGAGTTATAATAATGAGGGAGCATATGCTACTTTGAAGTATCCAGATTTTGAAACTCCATCTTTCCATACATTTAAAGCTGTAGATAAACCGAAGATAGACGTTTGCTATTTTGGTTGTGAAGGACATGATGTAGATTTAGATTTGACATTAATGGCTCTAGCTGATGCTGTCTCTTCTAACAACTCTAGTCCTATTGAGATTCATTCTGGGGTTGATTTTGAGGCATTAGGCATATTAAACCCACCTTCTTGGAGCATTACATTGACAGATGATACTACAGGTACCCAAAATGTTCAGATTCCGAAGGCTCCCATGGTAGAAGGGCTGCCTTTGCCGCCTAGCATAGAGGAACCTCATAAGGCTGCTTATGAATACTTCTTGGAGCTCATTGCAGGACTGAAATTTATGCTCCAGACAACGGCATGTGAAGGAATTGAAGTTTTGTCATTCAGAAAATCTGGTTCTTGCCCAAAGGAAAACATCTCTGATAAGGAGGGAATGAATGAATTGACATGGGGAGATGATTTAAGAGTTTGCAGCTCCATTTATGTCCTCTCCGCACTCGTTTCGTGGCTCAGTTTTAGCGATCTTCCTCGTTGTAATGTCGAAGGATGA 2370 41.31 MEFADELTAGATASNSNRHKPSDTRDSGELSSSDNDTEDVHPVFSNMPASLAPPVFPTLPLQSKSNVAIQADMDDKLETIQNICQKIVDTTNLYSFSKLDDQQVYSLMRLREISHRIINDRDSRVTRNDVISAMCFYINRLAGKCKDIVDILNKMSYKDLDDQQMQQLLRLKELLCGIVDGAKDVETEPSHIVEQGMVSDMWTTESLEVEPLDSCNDDVPLGETQIVMVEDEQAVAEVRLENQYCDPHVKHSVSWPKNGSLTLEWVVEMMKTLELSSRNYSPAEFQLIMPVSVVDSILDVAASILHKEPNCVEVDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQYFVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVYMLRGNHETRSCTSSYGFEKEVRTKYGEQGEKVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNDKERKTQKLEIGSLQDLSKLERFFIDIPTEDEDPNIVLADVLWSDPSKVDGLRENQARGAGLLWGPDSTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSTDHDIESGKLYTLFSAPDFPQFGQKSYNNEGAYATLKYPDFETPSFHTFKAVDKPKIDVCYFGCEGHDVDLDLTLMALADAVSSNNSSPIEIHSGVDFEALGILNPPSWSITLTDDTTGTQNVQIPKAPMVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTTACEGIEVLSFRKSGSCPKENISDKEGMNELTWGDDLRVCSSIYVLSALVSWLSFSDLPRCNVEG 789
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35074806 35082898 + ClG42_09g0202900.10 Clacu09g2029 258337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g2029 789 Pfam Calcineurin-like phosphoesterase 322 541 IPR004843 GO:0016787(InterPro)
Clacu09g2029 789 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED 80 620 IPR051134 -
Clacu09g2029 789 SUPERFAMILY Metallo-dependent phosphatases 277 617 IPR029052 -
Clacu09g2029 789 PRINTS Serine/threonine phosphatase family signature 385 409 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 PRINTS Serine/threonine phosphatase family signature 569 585 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 PRINTS Serine/threonine phosphatase family signature 352 379 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 PRINTS Serine/threonine phosphatase family signature 322 349 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 PRINTS Serine/threonine phosphatase family signature 422 448 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 PRINTS Serine/threonine phosphatase family signature 475 502 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 SMART pp2a_7 289 613 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 ProSitePatterns Serine/threonine specific protein phosphatases signature. 386 391 IPR006186 GO:0016787(InterPro)
Clacu09g2029 789 Gene3D - 221 625 IPR029052 -
Clacu09g2029 789 MobiDBLite consensus disorder prediction 1 46 - -
Clacu09g2029 789 MobiDBLite consensus disorder prediction 19 36 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g2029 Clacu-Chr9:35074806 Clacu10g0009 Clacu-Chr10:504384 2.10E-113 dispersed
Clacu09g2029 Clacu-Chr9:35074806 Clacu09g2034 Clacu-Chr9:35126660 1.90E-10 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g2029 K04460 - csv:101211172 1376.3