Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu09g2047 ATGGAGATTACATACTCATCACCTAGCGCCACCAGTCTTGCTTTCTCTAATTCTGCTCTTTCCGCCATGCCTGCCTCCGGCCGGCCTGTCAAGGTCATTCCATTGCAGCATCCTAGTACGACGTCCGCCTCCTCGGCCGTTGGTTTCTACGCCGGCACTCTGGTAAAGTCATGGACGACGAAGGTTAAGCGGATGACTTGGATTCACTGGATGGAGCTTCTGTTACCTTGCTCCCGTTGGATTAGAACGTATAAATGGCGGGAGTATTTACAGAGCGATATCTTGTCCGGGATTACTATTGGCATCATGCTCGTTCCGCAGGCAATGTCTTATGCAAAACTAGCCGGGCTTCAACCTATATACGGACTTTATTCCGGTTTTCTCCCTTTGTTCATCTATGCAATTTTTGGTTCTTCTCGTCAGCTTGCAGTTGGTCCAGTAGCATTGGTTTCTCTACTGGTTTCCAATGTCCTGGGTGGAATTGTCAACTCATCTGAGGAATTATATACTGAACTCGCAATATTATTGGCACTCATGGTTGGAATATTGGAATGCGTGATGGGTCTCTTGAGGCTTGGATGGCTTATTCGCTTTATCAGCCACTCTGTAATCTCTGGCTTTACTACAGCTTCTGCCTTTGTGATTGGATTATCCCAAGTGAAATACTTTCTGGGGTATGATGTATCAAGAAGTAGCAGAATCGTGCCTCTAATTGAGAGCATAATAGCTGGAGCAGACGGGTTCTTATGGGCACCTTTTATAATGGGATCAGTCATCCTTGCGGTACTTCAAATCATGAAGCATTTGGGAAAAACAAGGAAGCACTTACGGTTTCTCAGAGTTGCTGGTCCCCTTACAGCCGTTGTTTTGGGCACAACTTTGACGAAAGTATTAAATCTACCTTCCATTACTTTGGTTGGAGACATTCCCCAAGGCCTTCCAATGTTTTCTATTCCTAAAAGATTTGAGCACGTGAAGTCGTTGATTCCAACTGCCTTTCTGATCACTGGAGTGGCTATATTGGAATCTGTTGGGATTGCGAAAGCATTAGCAGCCAAGAATGGGTATGAGTTAGATTCAAATCAGGAGTTATTTGGCCTTGGAGTAGCCAATGTTGTCGGCTCATTTTTTTCTGCATATCCCACAACAGGTTCTTTCTCAAGATCAGCTGTGAACCATGAAAGTGGAGCAAAAACTAGCTTATCTCAGATTGTTACAGGAATCATTATGGGCGGTGCCCTTCTTTTCTTGACTCCGCTGTTTGAGCACATTCCTCAGTGTGCTTTGGCTGCCATTGTCATCTCTGCGGTTTTAACTTTGGTGGATTACGAGGAAGCTATTTTTTTGTGGCGTATAGATAAGAAAGATTTTCTTCTTTGGGTGATTACTGCCATTACTACGTTGTTCCTTGGTATTGAGATTGGTGTCTTAATTGGGGTGGGTGTTTCACTGGTCTTTGTCATTCACGAATCTGCAAATCCACATATGGCTGTATTGGGGCGTCTTCCTGGCACCACTGTGTATAGAAATATTCAACAGTATCCTGAGGCATATACCTATAATGGGATCGTGATTGTTCGAATTGATGCACCAATTTATTTTGCAAACACAAGTTACATCAAAGACAGGTTACGTGATTATGAAGTTGAAGTGGATCGATTTACTGGTCGTGGACCGGACGTTGAAAGAGTCTATTTTGTGATTATAGAGATGGCACCTGTTACTTACATAGATTCAAGTGCTGTCCAAGCTCTAAAAGAATTGTATCAAGAGTACAAACTTCGCGATATTCAGATTGCCATTTCCAATCCGAATCGAGATGTTCTGCTTACATTTTCAAGATCTGGCGTCGTTGAGCTTATTGGCAAGGAGTGGTTTTTTGTGAGAGTTCATGATGCAGTTCAAGTTTGTCTTCAACATGTGGAGAGCTTAAATGAAACAAACAAAATATCAGATCCATCACCTAAAGATGGATCATCAAGCTTTCTCCAAAGTTTACTGAAGTCTAGAAGTGAGGATTTATCAGACGATGTATCATGGAATAGTCAAGCACTAAGTTTACGCGCCATTAACGCGCCGCCGATCTTCTATAAAACGGCAGGTTTCTTCGGAGTTCGTTTTACATCAACTCCTTCTTCTTCCCCTTCCTCAGCTGCCTACACGGTTTCTCCTCCTGCTGTTTTGTCACTGCTTTCCTCCGCCATTGTTATTGCACTCCGAATCACTGCTTCACTGCTTCAGTTCGTTAAAAATGTTTTTCGTTGCATCATTATTCTTTCGCCGCAGTGTTGCACTAAGCATCATACTGCAAGGAATGAGCCTCCCATTGCATTAATCAACATGTTGCAGTTCAAGGCCGACGGATGCGATAAAGGATTCTTAGTGGGGTCTCTGCCGGAACGAGTATATAACTGTTGA 2418 43.38 MEITYSSPSATSLAFSNSALSAMPASGRPVKVIPLQHPSTTSASSAVGFYAGTLVKSWTTKVKRMTWIHWMELLLPCSRWIRTYKWREYLQSDILSGITIGIMLVPQAMSYAKLAGLQPIYGLYSGFLPLFIYAIFGSSRQLAVGPVALVSLLVSNVLGGIVNSSEELYTELAILLALMVGILECVMGLLRLGWLIRFISHSVISGFTTASAFVIGLSQVKYFLGYDVSRSSRIVPLIESIIAGADGFLWAPFIMGSVILAVLQIMKHLGKTRKHLRFLRVAGPLTAVVLGTTLTKVLNLPSITLVGDIPQGLPMFSIPKRFEHVKSLIPTAFLITGVAILESVGIAKALAAKNGYELDSNQELFGLGVANVVGSFFSAYPTTGSFSRSAVNHESGAKTSLSQIVTGIIMGGALLFLTPLFEHIPQCALAAIVISAVLTLVDYEEAIFLWRIDKKDFLLWVITAITTLFLGIEIGVLIGVGVSLVFVIHESANPHMAVLGRLPGTTVYRNIQQYPEAYTYNGIVIVRIDAPIYFANTSYIKDRLRDYEVEVDRFTGRGPDVERVYFVIIEMAPVTYIDSSAVQALKELYQEYKLRDIQIAISNPNRDVLLTFSRSGVVELIGKEWFFVRVHDAVQVCLQHVESLNETNKISDPSPKDGSSSFLQSLLKSRSEDLSDDVSWNSQALSLRAINAPPIFYKTAGFFGVRFTSTPSSSPSSAAYTVSPPAVLSLLSSAIVIALRITASLLQFVKNVFRCIIILSPQCCTKHHTARNEPPIALINMLQFKADGCDKGFLVGSLPERVYNC 805
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 35300322 35313551 - ClG42_09g0204700.10 Clacu09g2047 258355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu09g2047 805 Pfam STAS domain 514 633 IPR002645 -
Clacu09g2047 805 NCBIfam sulfate permease 76 633 IPR001902 GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu09g2047 805 Gene3D STAS domain 493 641 IPR036513 -
Clacu09g2047 805 CDD STAS_SulP_like_sulfate_transporter 514 630 - -
Clacu09g2047 805 SUPERFAMILY SpoIIaa-like 515 637 IPR036513 -
Clacu09g2047 805 ProSiteProfiles STAS domain profile. 513 637 IPR002645 -
Clacu09g2047 805 FunFam Sulfate transporter 31 493 640 - -
Clacu09g2047 805 ProSitePatterns SLC26A transporters signature. 119 140 IPR018045 GO:0008271(InterPro)|GO:0008272(InterPro)
Clacu09g2047 805 PANTHER SULFATE TRANSPORTER 63 639 IPR001902 GO:0005887(PANTHER)|GO:0016020(InterPro)|GO:0055085(InterPro)
Clacu09g2047 805 Pfam Sulfate permease family 90 463 IPR011547 GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu09g2047 Clacu-Chr9:35300322 Clacu11g0272 Clacu-Chr11:2458052 4.50E-92 dispersed
Clacu09g2047 Clacu-Chr9:35300322 Clacu11g1713 Clacu-Chr11:28382739 1.60E-108 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu09g2047 K18059 - csv:101202870 1210.67