Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Clacu09g2069 | ATGGGGAAGAGGGGGGGCTGGTTTTCTGCTGTGAAGAAAGCATTTGCTCCCGAATCTAAGGAAAAGAAAGATCAGAAAACCAACAAATCAAAGAAAAGATGGTTTGGGAAGCCAAAGAAATTGGAGACAGTGGCATCTGCAGAGCCAGCTTCATTAGATGTGTCTGTTCTACCAATTGAAGAGGTGAAACTAGCAGATGCAGAGAATGAACAAAGCAAACATGCTTACTCTGTTGCCATTGCCACTGCAGTCGCTGCCGAGGCGGCTGTTGCAGCCGCTCAGGCTGCGGTGGAGGTCGTTCGGCTCACTACCATCCCTCGGTACTCCGGGAAATCAAAGGAAGAAATAGCAGCCATCAAGATCCAGACTGCATTCCGTGGTTATATGGCAAGGAGGGCCCTGCGGGCATTAAGAGGGTTGGTGAGGCTAAAGTCATTGATACAAGGCCAATCTGTTAAAAGACAAGCAACAACCACATTAAGATGCATGCAGACTCTTGCTCGTGTGCAGTCACAGATTCGTGCAAGAAGAATTAGAATGTCAGAGGAGAATCAGGCTCTTCAGAGGCAACTCCAACAAAAACACGAAAGAGAGCTTGAGAGATTAACTACTTCTGCAAACAATGAATGGAATGACAGTACCAAATCAAAGGAGCAAATTGAAGCCAGATTAGTTAACAGGCAAGAAGCAGCAACAAGAAGAGAAAGAGCATTGGCGTATGCTTACTCTCATCAGAATTCATGGAAGAATTCTTCAAAATCTGCAAACCCTACATTCATGGACCCGAACAATCCCCGCTGGGGATGGAGTTGGTTAGAACGATGGATGGCCGCTCGTCCATGGGAGACTAAGAGCACGGTCGATTATCACGATCGTGGCTCCGTCAAGAGCGCGATCAGCCATGCAACCTCGATCGGAGACATTGCCAAAGCTTATGCCCGTCGCGATCTCAATCTCGACATCAAGCCTTTTCCAAGGACTCCAACGAGCCAAAAAACGAGCCGAGCTCCGAGTCACCAATCACCGGCGACTCCTACGAAGGCGCATTCGTCGCTATCTGCAGGGAGAAAATTGAAGCCGGATAGTCCAAGAGGAATCGGCTGGGGCGGAGACGCTGATTCCAGAAGCGCATTGAGCGTCAAATCGGAGAGGTACCGGCGACACAGCATCGCTGGATCATCGGTGAGGGATGATGAGAGCTTCACGAGTTCGCCGTCGGTTCCAAGCTACATGGCATCCACAGAAGCAGCCAGGGCTAGGTCCCGATTGTCGAGTCCAATGGGAACGGAGAAGACGGCGGCGTTTCCAGAGAAGGGACCGGCGAGTATCGGCGCAAAGAAACGGCTGTCGTTCCCCGCCTCGCCGACAAATTCGAGGAGGCACTCTGGTCCGCCGAAAATAGACGCTAGTCCGATCAAGAATGTTGCAGAGAGAGATTTTACCGGCGAGAGCAGATAG | 1458 | 50.62 | MGKRGGWFSAVKKAFAPESKEKKDQKTNKSKKRWFGKPKKLETVASAEPASLDVSVLPIEEVKLADAENEQSKHAYSVAIATAVAAEAAVAAAQAAVEVVRLTTIPRYSGKSKEEIAAIKIQTAFRGYMARRALRALRGLVRLKSLIQGQSVKRQATTTLRCMQTLARVQSQIRARRIRMSEENQALQRQLQQKHERELERLTTSANNEWNDSTKSKEQIEARLVNRQEAATRRERALAYAYSHQNSWKNSSKSANPTFMDPNNPRWGWSWLERWMAARPWETKSTVDYHDRGSVKSAISHATSIGDIAKAYARRDLNLDIKPFPRTPTSQKTSRAPSHQSPATPTKAHSSLSAGRKLKPDSPRGIGWGGDADSRSALSVKSERYRRHSIAGSSVRDDESFTSSPSVPSYMASTEAARARSRLSSPMGTEKTAAFPEKGPASIGAKKRLSFPASPTNSRRHSGPPKIDASPIKNVAERDFTGESR | 485 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 9 | 35494288 | 35497545 | - | ClG42_09g0206900.10 | Clacu09g2069 | 258377 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Clacu09g2069 | 485 | MobiDBLite | consensus disorder prediction | 324 | 351 | - | - | |
| Clacu09g2069 | 485 | MobiDBLite | consensus disorder prediction | 395 | 411 | - | - | |
| Clacu09g2069 | 485 | Coils | Coil | 177 | 197 | - | - | |
| Clacu09g2069 | 485 | PANTHER | IQ-DOMAIN 5-RELATED | 6 | 439 | - | - | |
| Clacu09g2069 | 485 | SMART | iq_5 | 113 | 135 | IPR000048 | GO:0005515(InterPro) | |
| Clacu09g2069 | 485 | ProSiteProfiles | IQ motif profile. | 114 | 142 | - | - | |
| Clacu09g2069 | 485 | Gene3D | iswi atpase | 111 | 149 | - | - | |
| Clacu09g2069 | 485 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
| Clacu09g2069 | 485 | MobiDBLite | consensus disorder prediction | 377 | 394 | - | - | |
| Clacu09g2069 | 485 | MobiDBLite | consensus disorder prediction | 320 | 485 | - | - | |
| Clacu09g2069 | 485 | Pfam | IQ calmodulin-binding motif | 117 | 135 | IPR000048 | GO:0005515(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Clacu01g0041 | Clacu-Chr1:380136 | Clacu09g2069 | Clacu-Chr9:35494288 | 5.60E-26 | dispersed | |
| Clacu03g1192 | Clacu-Chr3:23178893 | Clacu09g2069 | Clacu-Chr9:35494288 | 2.90E-33 | dispersed | |
| Clacu04g0929 | Clacu-Chr4:23563185 | Clacu09g2069 | Clacu-Chr9:35494288 | 5.70E-106 | dispersed | |
| Clacu05g1057 | Clacu-Chr5:9475179 | Clacu09g2069 | Clacu-Chr9:35494288 | 1.40E-19 | dispersed | |
| Clacu05g1958 | Clacu-Chr5:28721197 | Clacu09g2069 | Clacu-Chr9:35494288 | 7.40E-28 | dispersed | |
| Clacu05g2280 | Clacu-Chr5:31155807 | Clacu09g2069 | Clacu-Chr9:35494288 | 3.40E-110 | dispersed | |
| Clacu06g0117 | Clacu-Chr6:1258933 | Clacu09g2069 | Clacu-Chr9:35494288 | 7.70E-26 | dispersed | |
| Clacu06g0630 | Clacu-Chr6:7212953 | Clacu09g2069 | Clacu-Chr9:35494288 | 7.60E-16 | dispersed | |
| Clacu07g0989 | Clacu-Chr7:24327790 | Clacu09g2069 | Clacu-Chr9:35494288 | 1.50E-25 | dispersed | |
| Clacu07g1527 | Clacu-Chr7:29894899 | Clacu09g2069 | Clacu-Chr9:35494288 | 4.80E-21 | dispersed | |
| Clacu09g0028 | Clacu-Chr9:358891 | Clacu09g2069 | Clacu-Chr9:35494288 | 6.80E-10 | dispersed | |
| Clacu09g0077 | Clacu-Chr9:742456 | Clacu09g2069 | Clacu-Chr9:35494288 | 1.30E-21 | dispersed | |
| Clacu01g0760 | Clacu-Chr1:8237551 | Clacu09g2069 | Clacu-Chr9:35494288 | 7.70E-28 | transposed | |
| Clacu01g2430 | Clacu-Chr1:34862051 | Clacu09g2069 | Clacu-Chr9:35494288 | 1.10E-33 | transposed | |
| Clacu02g0249 | Clacu-Chr2:2319190 | Clacu09g2069 | Clacu-Chr9:35494288 | 8.40E-15 | transposed | |
| Clacu05g0018 | Clacu-Chr5:419461 | Clacu09g2069 | Clacu-Chr9:35494288 | 4.00E-31 | transposed | |
| Clacu06g0268 | Clacu-Chr6:3253824 | Clacu09g2069 | Clacu-Chr9:35494288 | 7.00E-30 | transposed | |
| Clacu10g1553 | Clacu-Chr10:28798559 | Clacu09g2069 | Clacu-Chr9:35494288 | 6.30E-20 | transposed | |
| Clacu10g2021 | Clacu-Chr10:33660801 | Clacu09g2069 | Clacu-Chr9:35494288 | 6.50E-76 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Clacu09g2069 | - | - | - | 0.0 |