Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Clacu09g2259 | ATGGTATTGCCACCGTCCAATCCATCCTTATCCATACGTTCTGGGCTCTACGAATGGCATTCATCGAGTAGGAATGCAAAAAGTCTCTATCCTCGATCTGATTCTGGTTACTTTATGGTAGCTGGTGGTGTCGGTTGTTCTGGTTTGGTGATTGAGTTTTTGGTTCAGGTTTTGGGATTGCAGGTGGGGAAGTGTATGAGGGATTTGATTTGGATTTCGTCTTCACTGTCTCCAACCTGGTTTGAGACTTTAAGGAAATGCAGACCGGTCATCAATTCTGCAGAATTGGACTTTTTCTCTGAATACGGCGATGCCAACAGATTCAAAGTTCGCGAAGTTATTGGAAAGGGGAGTTATGGTGTGGTTTGTTCAGCTGTTGACACTCTCACTAATGAAAAAGTGGCAATAAAGAAGATACACGATATTTTTGAACATGTATCTGATGCTGCCCGTATTCTTCGTGAGATAAAGCTGCTCAGGCTTCTACGTCATCCTGATATTGTTGAAATTAAACACATTATGTTACCACCTTCTCGTAGGGGGTTCAAAGATATTTTTGTTGTGTTTGAGTTGATGGAATCAGATTTGCATCAAGTCATCAAGGCCAACGATGATTTAACAAAAGAGCACTATCAATTTTTCCTTTATCAGCTACTCCGTGCGCTGAAATATATTCACACAGCAAATGTCTACCATCGGGATTTAAAACCAAAGAATATATTGGCAAATGCAAATTGCAAACTCAAAATCTGTGATTTTGGATTGGCTAGAGTTGCTTTTAGTGACACCCCAACTACAATATTTTGGACGGACTATGTTGCTACTAGATGGTATAGGGCTCCAGAGCTATGTGGTTCTTTCTTCTCTAAGTATACTCCTGCCATTGACATTTGGAGTATTGGCTGCATATTTGCTGAAGTACTGACCGGGAAACCACTTTTTCCTGGTAAAAATATTGTTCATCAGCTTGATTTGATGACAGATCTCCTTGGAACACCGTCATTGGATACCATTTCTCGGGTAAGAAATGAAAAGGCCAGGAGGTACTTAACTAGTATGAGGAAGAAGCAGCCCATACCCTTTTCTCAGAAGTTCCCTAATGCTGATCCTGTAGCCCTGCAATTGCTACAACGATTGCTTGCATTTGATCCAAAGGATCGACCTACTGCTGAAGAGGCTTTGGCAGATCCTTACTTTAAGGGGCTGGCAAAAGTTGAGAGGGAACCTTCTTGCCAGCCAATCTCAAAGGTGGAGTTTGAATTTGAAAGGAGAAAGGTCACAAAGGATGACATTCGCGAGCTAATATTCCTTGAGATACTAGAATACCATCCTCAACTGCTAAAAGACTACTTAAATGGAACTGAGAGATCAAATTTTCTTTATCCAAGTGCACTAGATCAGTTCAAAAAGCAATTTGCTCATCTTGAAGATAATGGAGGGAAAAGTGGACCAGTTTATCCTTTAGAAAGAAAACATGCATCTCTTCCTAGGTCTTCAGTACAGTCAAATACCATTCCTCCTAAAGCTACATCAAATATTGTTTCCTTTAAAGACCGATATGCGCCAGCAGGTTCGTTCAGCAGTCAGCATTTCAGAGATCCAGCAGCGCAGAGGATTGCTGCTGCTCAAGCCAAGCCTGGAAGAATCTCGGGCCCGGTCGTGCCATATGAAAGTGGAAGTATTGTTAAAGATGCCTACGACCCGAGAATGTTAATTAGAAGTGCCTTCCCTTCTCATGCTATCCATCCAACATATTACTATCAGCAATCTTGCGGCCAAAATGAAGAAAGATCAGCAACGGGGGCTGAACAGGACACATCCTTGCAATGTAAACAATCCCCTCAATGTGGAATGGCTGCCAAATTAGCAGGAGATACAGCTGCTACTGGTGCTTTCTCAAATCCTTTCTTTATGGCGCGTGTAGGCATGCCCAAGATCGGAAACAATGACCGTGCTGCACGTTTGCAGGTAAGTGCTCAATATGATGCTGGAGCTGTTGCTGCTGCAACTACCACCACCCATCGAAACACTGGCACGGTCGAAATTCAGACTTTGAAACTCACTATCATCATATTGGCCATTGAAGAGGAAGCTGAGCTTATTGATGGATAG | 2112 | 42.52 | MVLPPSNPSLSIRSGLYEWHSSSRNAKSLYPRSDSGYFMVAGGVGCSGLVIEFLVQVLGLQVGKCMRDLIWISSSLSPTWFETLRKCRPVINSAELDFFSEYGDANRFKVREVIGKGSYGVVCSAVDTLTNEKVAIKKIHDIFEHVSDAARILREIKLLRLLRHPDIVEIKHIMLPPSRRGFKDIFVVFELMESDLHQVIKANDDLTKEHYQFFLYQLLRALKYIHTANVYHRDLKPKNILANANCKLKICDFGLARVAFSDTPTTIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNIVHQLDLMTDLLGTPSLDTISRVRNEKARRYLTSMRKKQPIPFSQKFPNADPVALQLLQRLLAFDPKDRPTAEEALADPYFKGLAKVEREPSCQPISKVEFEFERRKVTKDDIRELIFLEILEYHPQLLKDYLNGTERSNFLYPSALDQFKKQFAHLEDNGGKSGPVYPLERKHASLPRSSVQSNTIPPKATSNIVSFKDRYAPAGSFSSQHFRDPAAQRIAAAQAKPGRISGPVVPYESGSIVKDAYDPRMLIRSAFPSHAIHPTYYYQQSCGQNEERSATGAEQDTSLQCKQSPQCGMAAKLAGDTAATGAFSNPFFMARVGMPKIGNNDRAARLQVSAQYDAGAVAAATTTTHRNTGTVEIQTLKLTIIILAIEEEAELIDG | 703 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 37358165 | 37363784 | - | ClG42_09g0225900.10 | Clacu09g2259 | 258567 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Clacu09g2259 | 703 | SMART | serkin_6 | 108 | 399 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu09g2259 | 703 | Pfam | Protein kinase domain | 109 | 399 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu09g2259 | 703 | FunFam | Mitogen-activated protein kinase | 100 | 201 | - | - | |
Clacu09g2259 | 703 | PANTHER | MITOGEN-ACTIVATED PROTEIN KINASE | 107 | 438 | IPR050117 | GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER) | |
Clacu09g2259 | 703 | ProSitePatterns | MAP kinase signature. | 143 | 246 | IPR003527 | GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu09g2259 | 703 | ProSiteProfiles | Protein kinase domain profile. | 108 | 399 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Clacu09g2259 | 703 | ProSitePatterns | Protein kinases ATP-binding region signature. | 114 | 138 | IPR017441 | GO:0005524(InterPro) | |
Clacu09g2259 | 703 | Gene3D | Phosphorylase Kinase; domain 1 | 123 | 445 | - | - | |
Clacu09g2259 | 703 | SUPERFAMILY | Protein kinase-like (PK-like) | 105 | 403 | IPR011009 | - | |
Clacu09g2259 | 703 | FunFam | Mitogen-activated protein kinase | 194 | 422 | - | - | |
Clacu09g2259 | 703 | Gene3D | Transferase(Phosphotransferase) domain 1 | 194 | 422 | - | - | |
Clacu09g2259 | 703 | CDD | STKc_TDY_MAPK | 107 | 444 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Clacu06g1542 | Clacu-Chr6:26356467 | Clacu09g2259 | Clacu-Chr9:37358165 | 3.30E-197 | dispersed | |
Clacu07g0657 | Clacu-Chr7:11992018 | Clacu09g2259 | Clacu-Chr9:37358165 | 7.00E-184 | dispersed | |
Clacu07g1032 | Clacu-Chr7:24757728 | Clacu09g2259 | Clacu-Chr9:37358165 | 6.00E-204 | dispersed | |
Clacu08g1641 | Clacu-Chr8:26159707 | Clacu09g2259 | Clacu-Chr9:37358165 | 1.20E-87 | dispersed | |
Clacu09g2259 | Clacu-Chr9:37358165 | Clacu10g1175 | Clacu-Chr10:24415100 | 6.20E-45 | dispersed | |
Clacu02g1884 | Clacu-Chr2:32334070 | Clacu09g2259 | Clacu-Chr9:37358165 | 2.00E-246 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
73853 | PF00069 | Pkinase | 1.00E-66 | CL0016 | Clacu | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Clacu09g2259 | - | - | - | 0.0 |