Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0013 ATGTCTGTTTTTTGTCTCTGCTTCTGCCTTCTGTTTGCTGGTAGCGCCACCGCGGGCGGTGGAGACGGCGGCGGCGGTCACTCCAGGGAGCTCGATAACACACCCACCTGGGCAGTTGCTGGTGTTTGTTTCTTTTTCATTGTTATTTCCATTGTGTTGGAAAAAGTTCTTCACAAAGTTGGAACGTGGTTGACAGAAAAGCACAAGAGTTCTCTGTATGAAGCTCTAGAGAAGGTTAAGGCTGAGTTGATGATTTTGGGATTCATTTCCCTGCTTCTGACTTTTGCACAAGCATATATAGTCCAAATTTGTATTCCTCCAGCCATTGCAAACTCCATGTTGCCTTGTCACCTTGAAGAGAAAGATGGCTCATCATCTGCAGCCAGTGAAGACGAACATCACCGGAGACTACAATGGCTAATTCGAAGATCATTGGCTGGAGGCCACAATGTCGTCTCGTGTAAGGATGGTAACGTGTCTCTTATATCTATTGATGGATTGCATCAGTTACACATTCTCATTTTCTTCTTAGCTGTGTTTCATGTGCTCTTTAGTGTTATCACAATGACACTTGGAAGGGTAAAGATTCGAGGCTGGAAGGAGTGGGAGCAGGAAACTTCAACCCATATCTATGAGTTTTTCAACGATCCTGCAAGATTTAGGCTTACTCATGAGACATCTTTTGTGAAAGCACACACCAGCTTTTGGACACGTCTTCCTTTCTTCTTCTATATTGGCTGCTTTTTCAGGCAATTTTATGGGTCTGTTAGTAAGGCTGATTACTTGACACTACGCAATGGATTCATAACAGTTCATTTAGCACCTGGAAGTAAATTTAACTTCCAGAGATATATCAAAAGGTCATTAGAAGACGACTTCAAGGTAGTAGTCGGTGTGAGTCCTGTTCTGTGGTTGTCATTTGTGATCTTCCTGCTCCTTAATCTAGCTGGATGGCATACATTGTTTTGGGCATCATTTATCCCTTTGATTATAATCTTAGCTGTTGGATCAAAACTTCAAGCCATTTTGACTAGAATGGCTCTTGAAATCTCTGAGAAACATGCAGTGGTCCAGGGAATTCCACTCGTGCAAGGATCTGATAAATATTTCTGGTTCGGTCGACCTCAACTGATTCTTCATCTCATGCATTTTGCTTTATTTCAGAATGCGTTCCAGACCACCTATATTTTGTCTACACTGTATTCTTTTGGCCCGAATTCTTGCTTCTCCGATGGTCGCATCCTTACAATTATAAAAGTTGGTTTAGGGGTAGCAGCATTATTCCTTTGCAGCTATGTTACGCTTCCGATATATGCCCTTGTAACTCAGATGGGTTCGGGTATGAAGAGGTCCATCTTTGATGAACAGACATCAAAGGCACTCAAGAAATGGCATGAAACAGCCAAGAAGAAGAAGCGGGTTCAACGAGCCTCAGCGACTAAAACACTTGGAGGTAGTTCAAATGCTTCACCTCTACGCTCCTTTGGACGCTCATTGCGACGGTTTAAAACTACGGGACACTCCATACGTGTGCCTGCGTATGAGGACCTCGAGTCGTCTGATTATGAGGGCGATCCATTAGCAACACCTACACAAGTATCAACAACGGAATCGATTAATGTTGATGTAGATGGAGATGAAATACGTGAAATTGCTGAAACAGACCAACCCCACAATACAAAGCAAGAAGAAGGAGATGAGTTCTCATTCATAAAGCCTGCAGCACCACTGAAATAA 1737 43.06 MSVFCLCFCLLFAGSATAGGGDGGGGHSRELDNTPTWAVAGVCFFFIVISIVLEKVLHKVGTWLTEKHKSSLYEALEKVKAELMILGFISLLLTFAQAYIVQICIPPAIANSMLPCHLEEKDGSSSAASEDEHHRRLQWLIRRSLAGGHNVVSCKDGNVSLISIDGLHQLHILIFFLAVFHVLFSVITMTLGRVKIRGWKEWEQETSTHIYEFFNDPARFRLTHETSFVKAHTSFWTRLPFFFYIGCFFRQFYGSVSKADYLTLRNGFITVHLAPGSKFNFQRYIKRSLEDDFKVVVGVSPVLWLSFVIFLLLNLAGWHTLFWASFIPLIIILAVGSKLQAILTRMALEISEKHAVVQGIPLVQGSDKYFWFGRPQLILHLMHFALFQNAFQTTYILSTLYSFGPNSCFSDGRILTIIKVGLGVAALFLCSYVTLPIYALVTQMGSGMKRSIFDEQTSKALKKWHETAKKKKRVQRASATKTLGGSSNASPLRSFGRSLRRFKTTGHSIRVPAYEDLESSDYEGDPLATPTQVSTTESINVDVDGDEIREIAETDQPHNTKQEEGDEFSFIKPAAPLK 578
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 539007 543316 - ClG42_10g0001300.10 Clacu10g0013 258637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0013 578 MobiDBLite consensus disorder prediction 520 540 - -
Clacu10g0013 578 PANTHER MLO-LIKE PROTEIN 1 23 512 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu10g0013 578 MobiDBLite consensus disorder prediction 552 568 - -
Clacu10g0013 578 MobiDBLite consensus disorder prediction 467 492 - -
Clacu10g0013 578 MobiDBLite consensus disorder prediction 552 578 - -
Clacu10g0013 578 MobiDBLite consensus disorder prediction 525 540 - -
Clacu10g0013 578 Pfam Mlo family 29 493 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g2283 Clacu-Chr5:31197283 Clacu10g0013 Clacu-Chr10:539007 2.70E-127 dispersed
Clacu08g1088 Clacu-Chr8:20867670 Clacu10g0013 Clacu-Chr10:539007 2.60E-155 dispersed
Clacu09g1917 Clacu-Chr9:34077229 Clacu10g0013 Clacu-Chr10:539007 1.00E-85 dispersed
Clacu10g0013 Clacu-Chr10:539007 Clacu11g1998 Clacu-Chr11:30938180 2.10E-83 dispersed
Clacu01g2168 Clacu-Chr1:33140467 Clacu10g0013 Clacu-Chr10:539007 5.20E-199 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0013 K08472 - csv:116402632 1008.44