Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Clacu10g0063 ATGGGAGAAGAGGGACGATCCTTGGCCGTTACCCCCACTTGGGCTTTCGCCACAGTGGTTACTCTCATGGTTTCTCTTGGATTCTTCTTCCAAGGCACGTTGAAACGGACCAAAAAGTGGTTGAATAGGACGAAGAGAAAATCGTTACTCGCCGCGTTGGATAAGATTAAAGAAGAGCTGATGCTCTTTGGACTTCTTTCGTTGTTGATGGGTCACTGGATTGTTTTTGTTGCAAGAATTTGTGTTAAGTCATCTGTCTTGAGCAGCCGTTTCTATCCTTGTGCGTTGGAGATTGATCTGAAACGAGTTAGACATATTTCTATTGCAAGTGAAAACTTGAACAGTTCTGTTCCAAGGGAGCATAATAACGATGGGATACGAGAGTATTGTCCTGAGGGTCGTGAATCATTTGCTTCATATGAAAGTTTAGAGCAGCTTCATCGATTAATTTTCGTTCTTGGTGTCACCCATGTTTCATATAGCTTCATTGCTATTGCCCTGGCTATGATTAAGATATATGGGTGGAGAGCGTGGGAAAATGAGGCTAAGGCTTTGGCCATTCAGAATGCTCAAGAATCTGTACAAGCATCATCAACTGGACCAAACATAAGGCGACTATCAACTTTTGTCTTTCACCATACTTCTCATCCATGGAGTCAGCATAGAGTCCTTGTTTGGCTGCTCTGTTTCAGCCGCCAGTTTTGGAGTTCTATCAATCGAGCTGATTACATGGCTTTGCGGTTGGGATTTATCAGTACTCATGAACTTCCTATATCATATGACTTCCATAATTATATGCTTCGAAGCATGGACGATGAATTTCGCGATATGGTTGGTATAAGCGTGCCACTCTGGATATATGCCATTGCTTGCATCTTCCTCAACTTTCATGGAAGCAACATTTACTTTTGGCTTTCCTTTCTCCCTGCAATTTTGATTCTGCTAATCGGGACAAAACTGCACCGGGTAGTTGTAAAGTTGGCTGTAGAAGTTGTGGATACATCTCGAAGGGGATATTACCGTTTTAACTTGAGGGATGAACTGTTTTGGTTTGGGAAGCCTAAGCTTCTTTTATGGTCGATACAATTTATATCCTTCCAGAATGCTTTTGAGATGGCTACATTTATTTGGTCCCTGTGGGAAATTAAGGAACCTTCTTGTTTCATGGACAACGTAACATACGTAGGTATCCGCTTGGCCTTTGGGGTTATCACTCAGTTTTGGTGTAGCTTCATTACATTCCCACTCTATGTTATAGTAACTCAGATGGGGTCGAAGGTCAAGAAATCACTAGTGTCGGAGAATGTCCGAAACTCGCTTCATCAATGGAAAAGAAGAGTGAAGGCAAGGCCGGGTGTTTCTTCCTCAGTTGCACTTGTGGGTGCAACATCACTTTCATCCTCCGTTTGTACAATGGATGATGATGGTCAGATAATCGACGACTTTACTGTGGACTGCTTGGAAGGAAGCACATCGAACACCGCCCAATACACACATTTCTCCCAGGTACTTCAGCAAGCTTCGTCGGACGACACGGACGTACAAATATCTGTTAGTTCTAGTCCTCACATTACGTCCAACAACAAGGGTGAAGGCAATGAGGATCATAGAGGGAAATGA 1620 43.15 MGEEGRSLAVTPTWAFATVVTLMVSLGFFFQGTLKRTKKWLNRTKRKSLLAALDKIKEELMLFGLLSLLMGHWIVFVARICVKSSVLSSRFYPCALEIDLKRVRHISIASENLNSSVPREHNNDGIREYCPEGRESFASYESLEQLHRLIFVLGVTHVSYSFIAIALAMIKIYGWRAWENEAKALAIQNAQESVQASSTGPNIRRLSTFVFHHTSHPWSQHRVLVWLLCFSRQFWSSINRADYMALRLGFISTHELPISYDFHNYMLRSMDDEFRDMVGISVPLWIYAIACIFLNFHGSNIYFWLSFLPAILILLIGTKLHRVVVKLAVEVVDTSRRGYYRFNLRDELFWFGKPKLLLWSIQFISFQNAFEMATFIWSLWEIKEPSCFMDNVTYVGIRLAFGVITQFWCSFITFPLYVIVTQMGSKVKKSLVSENVRNSLHQWKRRVKARPGVSSSVALVGATSLSSSVCTMDDDGQIIDDFTVDCLEGSTSNTAQYTHFSQVLQQASSDDTDVQISVSSSPHITSNNKGEGNEDHRGK 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 993949 998453 - ClG42_10g0006300.10 Clacu10g0063 258687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Clacu10g0063 539 Pfam Mlo family 5 457 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Clacu10g0063 539 MobiDBLite consensus disorder prediction 511 539 - -
Clacu10g0063 539 MobiDBLite consensus disorder prediction 511 528 - -
Clacu10g0063 539 PANTHER MLO-LIKE PROTEIN 1 2 502 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Clacu05g1109 Clacu-Chr5:10064844 Clacu10g0063 Clacu-Chr10:993949 4.50E-139 dispersed
Clacu10g0063 Clacu-Chr10:993949 Clacu11g1998 Clacu-Chr11:30938180 1.00E-103 dispersed
Clacu10g0063 Clacu-Chr10:993949 Clacu09g1917 Clacu-Chr9:34077229 1.30E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Clacu10g0063 K08472 - csv:101217051 976.467